RNA–Protein interactions for RNA: ENST00000416529.5

RBM39-209, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-209ENST00000416529 CXXC1Q9P0U4 656 aaPredicted RBP8.29□□□□□ -1.08
RBM39-209ENST00000416529 DPP7Q9UHL4 492 aa8.29□□□□□ -1.08
RBM39-209ENST00000416529 USP20Q9Y2K6 914 aa8.29□□□□□ -1.08
RBM39-209ENST00000416529 COQ4Q9Y3A0 265 aa8.29□□□□□ -1.08
RBM39-209ENST00000416529 TRIP11Q15643 1979 aa8.29□□□□□ -1.08
RBM39-209ENST00000416529 VCANP13611 3396 aa8.29□□□□□ -1.08
RBM39-209ENST00000416529 TBKBP1A7MCY6 615 aa8.28□□□□□ -1.08
RBM39-209ENST00000416529 BECN2A8MW95 431 aa8.28□□□□□ -1.08
RBM39-209ENST00000416529 KIF4AO95239 1232 aa8.28□□□□□ -1.08
RBM39-209ENST00000416529 EDN1P05305 212 aa8.28□□□□□ -1.08
RBM39-209ENST00000416529 TPM3P06753 285 aa8.28□□□□□ -1.08
RBM39-209ENST00000416529 TMEM191BP0C7N4 346 aa8.28□□□□□ -1.08
RBM39-209ENST00000416529 TYMPP19971 482 aa8.28□□□□□ -1.08
RBM39-209ENST00000416529 AARSP49588 968 aaKnown RBP eCLIP8.28□□□□□ -1.084e-6■□□□□ 9.4
RBM39-209ENST00000416529 ZNF165P49910 485 aa8.28□□□□□ -1.08
RBM39-209ENST00000416529 VAMP7P51809 220 aa8.28□□□□□ -1.08
RBM39-209ENST00000416529 DEFB103AP81534 67 aa8.28□□□□□ -1.08
RBM39-209ENST00000416529 PTPROQ16827 1216 aa8.28□□□□□ -1.08
RBM39-209ENST00000416529 ZSCAN23Q3MJ62 389 aa8.28□□□□□ -1.08
RBM39-209ENST00000416529 ZACNQ401N2 412 aa8.28□□□□□ -1.08
RBM39-209ENST00000416529 CLLU1OSQ5K130 101 aa8.28□□□□□ -1.08
RBM39-209ENST00000416529 C9orf50Q5SZB4 431 aa8.28□□□□□ -1.08
RBM39-209ENST00000416529 KRT39Q6A163 491 aa8.28□□□□□ -1.08
RBM39-209ENST00000416529 ELMSAN1Q6PJG2 1045 aa8.28□□□□□ -1.08
RBM39-209ENST00000416529 KCNT2Q6UVM3 1135 aa8.28□□□□□ -1.08
RBM39-209ENST00000416529 LRSAM1Q6UWE0 723 aa8.28□□□□□ -1.08
RBM39-209ENST00000416529 DDX53Q86TM3 631 aaKnown RBP8.28□□□□□ -1.08
RBM39-209ENST00000416529 COLGALT2Q8IYK4 626 aa8.28□□□□□ -1.08
RBM39-209ENST00000416529 TMEM86AQ8N2M4 240 aa8.28□□□□□ -1.08
RBM39-209ENST00000416529 APPL2Q8NEU8 664 aa8.28□□□□□ -1.08
RBM39-209ENST00000416529 TMEM169Q96HH4 297 aa8.28□□□□□ -1.08
RBM39-209ENST00000416529 ZBTB45Q96K62 511 aaPredicted RBP8.28□□□□□ -1.08
RBM39-209ENST00000416529 FGFBP2Q9BYJ0 223 aa8.28□□□□□ -1.08
RBM39-209ENST00000416529 IMPG2Q9BZV3 1241 aa8.28□□□□□ -1.08
RBM39-209ENST00000416529 GPAMQ9HCL2 828 aa8.28□□□□□ -1.08
RBM39-209ENST00000416529 TMEM8AQ9HCN3 771 aa8.28□□□□□ -1.08
RBM39-209ENST00000416529 NGRNQ9NPE2 291 aaKnown RBP8.28□□□□□ -1.08
RBM39-209ENST00000416529 RNF19AQ9NV58 838 aa8.28□□□□□ -1.08
RBM39-209ENST00000416529 SPG21Q9NZD8 308 aa8.28□□□□□ -1.08
RBM39-209ENST00000416529 GDF2Q9UK05 429 aaPredicted RBP8.28□□□□□ -1.08
RBM39-209ENST00000416529 FAN1Q9Y2M0 1017 aa8.28□□□□□ -1.08
RBM39-209ENST00000416529 SF3B1O75533 1304 aaKnown RBP eCLIP8.28□□□□□ -1.083e-7■■□□□ 14.3
RBM39-209ENST00000416529 ANO9A1A5B4 782 aa8.27□□□□□ -1.09
RBM39-209ENST00000416529 LINC01553A4QN01 128 aa8.27□□□□□ -1.09
RBM39-209ENST00000416529 LACTBL1A8MY62 500 aa8.27□□□□□ -1.09
RBM39-209ENST00000416529 H3BNC9 293 aa8.27□□□□□ -1.09
RBM39-209ENST00000416529 BIN1O00499 593 aa8.27□□□□□ -1.09
RBM39-209ENST00000416529 PIRO00625 290 aa8.27□□□□□ -1.09
RBM39-209ENST00000416529 PTGESO14684 152 aa8.27□□□□□ -1.09
RBM39-209ENST00000416529 CLIC2O15247 247 aa8.27□□□□□ -1.09
RBM39-209ENST00000416529 AKAP3O75969 853 aa8.27□□□□□ -1.09
RBM39-209ENST00000416529 GALTP07902 379 aa8.27□□□□□ -1.09
RBM39-209ENST00000416529 CXCL8P10145 99 aa8.27□□□□□ -1.09
RBM39-209ENST00000416529 TNNI1P19237 187 aa8.27□□□□□ -1.09
RBM39-209ENST00000416529 MLH1P40692 756 aa8.27□□□□□ -1.09
RBM39-209ENST00000416529 ACOT2P49753 483 aa8.27□□□□□ -1.09
RBM39-209ENST00000416529 TAF6P49848 677 aa8.27□□□□□ -1.09
RBM39-209ENST00000416529 CYP2J2P51589 502 aa8.27□□□□□ -1.09
RBM39-209ENST00000416529 TLR1Q15399 786 aa8.27□□□□□ -1.09
RBM39-209ENST00000416529 NAB2Q15742 525 aa8.27□□□□□ -1.09
RBM39-209ENST00000416529 MAN2A1Q16706 1144 aa8.27□□□□□ -1.09
RBM39-209ENST00000416529 UPP1Q16831 310 aa8.27□□□□□ -1.09
RBM39-209ENST00000416529 SGSM1Q2NKQ1 1148 aa8.27□□□□□ -1.09
RBM39-209ENST00000416529 DPCR1Q3MIW9 517 aa8.27□□□□□ -1.09
RBM39-209ENST00000416529 SV2CQ496J9 727 aa8.27□□□□□ -1.09
RBM39-209ENST00000416529 CCDC40Q4G0X9 1142 aa8.27□□□□□ -1.09
RBM39-209ENST00000416529 OXLD1Q5BKU9 147 aa8.27□□□□□ -1.09
RBM39-209ENST00000416529 CEP135Q66GS9 1140 aa8.27□□□□□ -1.09
RBM39-209ENST00000416529 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.27□□□□□ -1.09
RBM39-209ENST00000416529 C15orf39Q6ZRI6 1047 aa8.27□□□□□ -1.09
RBM39-209ENST00000416529 ENOSF1Q7L5Y1 443 aa8.27□□□□□ -1.09
RBM39-209ENST00000416529 PPFIBP1Q86W92 1011 aa8.27□□□□□ -1.09
RBM39-209ENST00000416529 TRIM59Q8IWR1 403 aa8.27□□□□□ -1.09
RBM39-209ENST00000416529 TMEM192Q8IY95 271 aa8.27□□□□□ -1.09
RBM39-209ENST00000416529 C1orf216Q8TAB5 229 aa8.27□□□□□ -1.09
RBM39-209ENST00000416529 HELQQ8TDG4 1101 aa8.27□□□□□ -1.09
RBM39-209ENST00000416529 HPS3Q969F9 1004 aa8.27□□□□□ -1.09
RBM39-209ENST00000416529 ACDQ96AP0 544 aa8.27□□□□□ -1.09
RBM39-209ENST00000416529 TIFAQ96CG3 184 aa8.27□□□□□ -1.09
RBM39-209ENST00000416529 CEP295NLQ96MC4 621 aa8.27□□□□□ -1.09
RBM39-209ENST00000416529 CDCA3Q99618 268 aaPredicted RBP8.27□□□□□ -1.09
RBM39-209ENST00000416529 DUSP9Q99956 384 aaKnown RBP8.27□□□□□ -1.09
RBM39-209ENST00000416529 SRRTQ9BXP5 876 aaKnown RBP8.27□□□□□ -1.09
RBM39-209ENST00000416529 PBX4Q9BYU1 374 aa8.27□□□□□ -1.09
RBM39-209ENST00000416529 OSBPL7Q9BZF2 842 aa8.27□□□□□ -1.09
RBM39-209ENST00000416529 HAPLN2Q9GZV7 340 aa8.27□□□□□ -1.09
RBM39-209ENST00000416529 CWH43Q9H720 699 aa8.27□□□□□ -1.09
RBM39-209ENST00000416529 GDAP2Q9NXN4 497 aa8.27□□□□□ -1.09
RBM39-209ENST00000416529 HSFX1Q9UBD0 423 aa8.27□□□□□ -1.09
RBM39-209ENST00000416529 ATXN7L1Q9ULK2 861 aaPredicted RBP8.27□□□□□ -1.09
RBM39-209ENST00000416529 ANK1P16157 1881 aa8.26□□□□□ -1.09
RBM39-209ENST00000416529 GOLGA6L19H0YKK7 550 aa8.26□□□□□ -1.09
RBM39-209ENST00000416529 H7C4K7 107 aa8.26□□□□□ -1.09
RBM39-209ENST00000416529 M0QZQ0 153 aa8.26□□□□□ -1.09
RBM39-209ENST00000416529 OIP5O43482 229 aa8.26□□□□□ -1.09
RBM39-209ENST00000416529 EFEMP2O95967 443 aa8.26□□□□□ -1.09
RBM39-209ENST00000416529 CYP11A1P05108 521 aa8.26□□□□□ -1.09
RBM39-209ENST00000416529 ZNF18P17022 549 aa8.26□□□□□ -1.09
RBM39-209ENST00000416529 TBXAS1P24557 533 aaPredicted RBP8.26□□□□□ -1.09
RBM39-209ENST00000416529 AKAP5P24588 427 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms