RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 ENO1P06733 434 aaKnown RBP11.12□□□□□ -0.63
COL12A1-203ENST00000416123 PDHA1P08559 390 aa11.12□□□□□ -0.63
COL12A1-203ENST00000416123 EEF1DP29692 281 aaKnown RBP11.12□□□□□ -0.63
COL12A1-203ENST00000416123 CHSY1Q86X52 802 aa11.12□□□□□ -0.63
COL12A1-203ENST00000416123 NUP93Q8N1F7 819 aa11.12□□□□□ -0.63
COL12A1-203ENST00000416123 PPP1R13LQ8WUF5 828 aa11.12□□□□□ -0.63
COL12A1-203ENST00000416123 GBA2Q9HCG7 927 aaPredicted RBP11.12□□□□□ -0.63
COL12A1-203ENST00000416123 AGPAT3Q9NRZ7 376 aa11.12□□□□□ -0.63
COL12A1-203ENST00000416123 ZC3H7BQ9UGR2 993 aaKnown RBP11.12□□□□□ -0.63
COL12A1-203ENST00000416123 ATP11BQ9Y2G3 1177 aa11.12□□□□□ -0.63
COL12A1-203ENST00000416123 IFNA8P32881 189 aa11.12□□□□□ -0.63
COL12A1-203ENST00000416123 ARFIP2P53365 341 aa11.12□□□□□ -0.63
COL12A1-203ENST00000416123 C3orf62Q6ZUJ4 267 aa11.12□□□□□ -0.63
COL12A1-203ENST00000416123 APOL5Q9BWW9 433 aa11.12□□□□□ -0.63
COL12A1-203ENST00000416123 CCDC90BQ9GZT6 254 aa11.12□□□□□ -0.63
COL12A1-203ENST00000416123 ING2Q9H160 280 aa11.12□□□□□ -0.63
COL12A1-203ENST00000416123 CD274Q9NZQ7 290 aa11.12□□□□□ -0.63
COL12A1-203ENST00000416123 NCOA3Q9Y6Q9 1424 aa11.12□□□□□ -0.63
COL12A1-203ENST00000416123 M0QYT0 321 aa11.12□□□□□ -0.63
COL12A1-203ENST00000416123 NR1H3Q13133 447 aa11.12□□□□□ -0.63
COL12A1-203ENST00000416123 USP10Q14694 798 aaKnown RBP11.12□□□□□ -0.63
COL12A1-203ENST00000416123 CEP19Q96LK0 163 aa11.12□□□□□ -0.63
COL12A1-203ENST00000416123 TSSK1BQ9BXA7 367 aa11.12□□□□□ -0.63
COL12A1-203ENST00000416123 BYSLQ13895 437 aaKnown RBP11.12□□□□□ -0.63
COL12A1-203ENST00000416123 ERO1BQ86YB8 467 aa11.12□□□□□ -0.63
COL12A1-203ENST00000416123 NR1H4Q96RI1 486 aaPredicted RBP11.12□□□□□ -0.63
COL12A1-203ENST00000416123 TASP1Q9H6P5 420 aa11.12□□□□□ -0.63
COL12A1-203ENST00000416123 AP1G2O75843 785 aa11.12□□□□□ -0.63
COL12A1-203ENST00000416123 TAF6P49848 677 aa11.12□□□□□ -0.63
COL12A1-203ENST00000416123 CUL3Q13618 768 aa11.12□□□□□ -0.63
COL12A1-203ENST00000416123 PTRHD1Q6GMV3 140 aaKnown RBP11.12□□□□□ -0.63
COL12A1-203ENST00000416123 C9orf72Q96LT7 481 aa11.12□□□□□ -0.63
COL12A1-203ENST00000416123 SLITRK1Q96PX8 696 aa11.12□□□□□ -0.63
COL12A1-203ENST00000416123 TCHHQ07283 1943 aa11.12□□□□□ -0.63
COL12A1-203ENST00000416123 SPDYE5A6NIY4 337 aa11.12□□□□□ -0.63
COL12A1-203ENST00000416123 PDHXO00330 501 aa11.12□□□□□ -0.63
COL12A1-203ENST00000416123 PQBP1O60828 265 aaKnown RBP11.12□□□□□ -0.63
COL12A1-203ENST00000416123 LRRC74AQ0VAA2 488 aa11.12□□□□□ -0.63
COL12A1-203ENST00000416123 SPDYE7PQ495Y7 208 aa11.12□□□□□ -0.63
COL12A1-203ENST00000416123 ANKEF1Q9NU02 776 aa11.12□□□□□ -0.63
COL12A1-203ENST00000416123 ADAM21Q9UKJ8 722 aa11.12□□□□□ -0.63
COL12A1-203ENST00000416123 CYB561D2O14569 222 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 SETSIPP0DME0 302 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 CDH18Q13634 790 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 NAB2Q15742 525 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 FAXCQ5TGI0 409 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 SDE2Q6IQ49 451 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 C4orf33Q8N1A6 199 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 NRBF2Q96F24 287 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 TRABDQ9H4I3 376 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 TNS2Q63HR2 1409 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 GPR182O15218 404 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 GYPCP04921 128 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 KLRC1P26715 233 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 KDSRQ06136 332 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 FEZF2Q8TBJ5 459 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 PCDHB2Q9Y5E7 798 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 PMPCBO75439 489 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 ARL4DP49703 201 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 PPP4CP60510 307 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 SLC30A10Q6XR72 485 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 FOPNLQ96NB1 174 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 RBM15Q96T37 977 aaKnown RBP eCLIP11.11□□□□□ -0.63
COL12A1-203ENST00000416123 ACTR5Q9H9F9 607 aaPredicted RBP11.11□□□□□ -0.63
COL12A1-203ENST00000416123 SCOCQ9UIL1 159 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 NWD1Q149M9 1564 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 CYP2C19P33261 490 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 ACADSBP45954 432 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 MIB1Q86YT6 1006 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 DCP1BQ8IZD4 617 aaKnown RBP11.11□□□□□ -0.63
COL12A1-203ENST00000416123 TAGAPQ8N103 731 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 OR2W6PQ8NHA6 318 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 NIF3L1Q9GZT8 377 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 AURKCQ9UQB9 309 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 PPP1R3GB7ZBB8 358 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 CST8O60676 142 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 POMCP01189 267 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 TGFB2P61812 414 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 CUL2Q13617 745 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 WDR48Q8TAF3 677 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 FAM136AQ96C01 138 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 TMA16Q96EY4 203 aaKnown RBP11.11□□□□□ -0.63
COL12A1-203ENST00000416123 OSMRQ99650 979 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 WDR35Q9P2L0 1181 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 SLC30A1Q9Y6M5 507 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 SUPT20HL2P0C7V6 817 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 OCM2P0CE71 109 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 OCMP0CE72 109 aaPredicted RBP11.11□□□□□ -0.63
COL12A1-203ENST00000416123 GRB10Q13322 594 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 SH2D3CQ8N5H7 860 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 TMEM169Q96HH4 297 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 SETD4Q9NVD3 440 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 SLC25A13Q9UJS0 675 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 CEMIPQ8WUJ3 1361 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 PXDNQ92626 1479 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 HSPA9P38646 679 aaKnown RBP11.11□□□□□ -0.63
COL12A1-203ENST00000416123 KDM4CQ9H3R0 1056 aa11.11□□□□□ -0.63
COL12A1-203ENST00000416123 AGO4Q9HCK5 861 aaKnown RBP11.11□□□□□ -0.63
COL12A1-203ENST00000416123 RBM12Q9NTZ6 932 aaKnown RBP11.11□□□□□ -0.63
COL12A1-203ENST00000416123 DDIT4Q9NX09 232 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms