RNA–Protein interactions for RNA: ENST00000415609.6

UBA3-203, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 5 BASIC

Gene UBA3, Length 2,004 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-203ENST00000415609 PDGFCQ9NRA1 345 aa13.1□□□□□ -0.31
UBA3-203ENST00000415609 AAASQ9NRG9 546 aa13.1□□□□□ -0.31
UBA3-203ENST00000415609 DNAJC17Q9NVM6 304 aaKnown RBP13.1□□□□□ -0.31
UBA3-203ENST00000415609 NXF1Q9UBU9 619 aaKnown RBP13.1□□□□□ -0.31
UBA3-203ENST00000415609 ANAPC5Q9UJX4 755 aa13.1□□□□□ -0.31
UBA3-203ENST00000415609 HBP1O60381 514 aa13.09□□□□□ -0.31
UBA3-203ENST00000415609 CXCL8P10145 99 aa13.09□□□□□ -0.31
UBA3-203ENST00000415609 TCF4P15884 667 aa13.09□□□□□ -0.31
UBA3-203ENST00000415609 IVDP26440 423 aa13.09□□□□□ -0.31
UBA3-203ENST00000415609 YWHAEP62258 255 aaKnown RBP13.09□□□□□ -0.31
UBA3-203ENST00000415609 IGBP1P78318 339 aa13.09□□□□□ -0.31
UBA3-203ENST00000415609 LACTBP83111 547 aaPredicted RBP13.09□□□□□ -0.31
UBA3-203ENST00000415609 CAV1Q03135 178 aa13.09□□□□□ -0.31
UBA3-203ENST00000415609 MBTD1Q05BQ5 628 aa13.09□□□□□ -0.31
UBA3-203ENST00000415609 ZNF252P-AS1Q0IIN9 211 aa13.09□□□□□ -0.31
UBA3-203ENST00000415609 NFX1Q12986 1120 aaKnown RBP13.09□□□□□ -0.31
UBA3-203ENST00000415609 TTLL4Q14679 1199 aa13.09□□□□□ -0.31
UBA3-203ENST00000415609 ATP13A4Q4VNC1 1196 aa13.09□□□□□ -0.31
UBA3-203ENST00000415609 CYP4A22Q5TCH4 519 aa13.09□□□□□ -0.31
UBA3-203ENST00000415609 ERICH1Q86X53 443 aa13.09□□□□□ -0.31
UBA3-203ENST00000415609 TFAP2BQ92481 460 aa13.09□□□□□ -0.31
UBA3-203ENST00000415609 XYLT2Q9H1B5 865 aa13.09□□□□□ -0.31
UBA3-203ENST00000415609 MROH8Q9H579 483 aa13.09□□□□□ -0.31
UBA3-203ENST00000415609 RPF1Q9H9Y2 349 aaKnown RBP13.09□□□□□ -0.31
UBA3-203ENST00000415609 PTPRHQ9HD43 1115 aa13.09□□□□□ -0.31
UBA3-203ENST00000415609 POLIQ9UNA4 740 aa13.09□□□□□ -0.31
UBA3-203ENST00000415609 A0A087WUV0 522 aaPredicted RBP13.08□□□□□ -0.31
UBA3-203ENST00000415609 B4GALT4O60513 344 aa13.08□□□□□ -0.31
UBA3-203ENST00000415609 KRT10P13645 584 aa13.08□□□□□ -0.31
UBA3-203ENST00000415609 CD19P15391 556 aa13.08□□□□□ -0.31
UBA3-203ENST00000415609 CHN1P15882 459 aa13.08□□□□□ -0.31
UBA3-203ENST00000415609 FASTKD5Q7L8L6 764 aaKnown RBP13.08□□□□□ -0.31
UBA3-203ENST00000415609 RCOR2Q8IZ40 523 aa13.08□□□□□ -0.31
UBA3-203ENST00000415609 CCDC89Q8N998 374 aa13.08□□□□□ -0.31
UBA3-203ENST00000415609 PPM1EQ8WY54 764 aa13.08□□□□□ -0.31
UBA3-203ENST00000415609 SLITRK1Q96PX8 696 aa13.08□□□□□ -0.31
UBA3-203ENST00000415609 ZNF518BQ9C0D4 1074 aa13.08□□□□□ -0.31
UBA3-203ENST00000415609 CDT1Q9H211 546 aa13.08□□□□□ -0.31
UBA3-203ENST00000415609 MINDY3Q9H8M7 445 aa13.08□□□□□ -0.31
UBA3-203ENST00000415609 ATXN2Q99700 1313 aaKnown RBP13.08□□□□□ -0.32
UBA3-203ENST00000415609 F8VP50 259 aa13.08□□□□□ -0.32
UBA3-203ENST00000415609 IL18RAPO95256 599 aa13.08□□□□□ -0.32
UBA3-203ENST00000415609 EIF4BP23588 611 aaKnown RBP13.08□□□□□ -0.32
UBA3-203ENST00000415609 MMP13P45452 471 aa13.08□□□□□ -0.32
UBA3-203ENST00000415609 RAP1GAPP47736 663 aa13.08□□□□□ -0.32
UBA3-203ENST00000415609 OGDHQ02218 1023 aa13.08□□□□□ -0.32
UBA3-203ENST00000415609 TAP1Q03518 808 aa13.08□□□□□ -0.32
UBA3-203ENST00000415609 MOGSQ13724 837 aa13.08□□□□□ -0.32
UBA3-203ENST00000415609 AUHQ13825 339 aaKnown RBP13.08□□□□□ -0.32
UBA3-203ENST00000415609 LONRF1Q17RB8 773 aa13.08□□□□□ -0.32
UBA3-203ENST00000415609 IZUMO3Q5VZ72 239 aa13.08□□□□□ -0.32
UBA3-203ENST00000415609 DENND1BQ6P3S1 775 aa13.08□□□□□ -0.32
UBA3-203ENST00000415609 TADA2BQ86TJ2 420 aa13.08□□□□□ -0.32
UBA3-203ENST00000415609 TMEM192Q8IY95 271 aa13.08□□□□□ -0.32
UBA3-203ENST00000415609 BBOF1Q8ND07 529 aa13.08□□□□□ -0.32
UBA3-203ENST00000415609 C3orf20Q8ND61 904 aa13.08□□□□□ -0.32
UBA3-203ENST00000415609 XPO6Q96QU8 1125 aaKnown RBP13.08□□□□□ -0.32
UBA3-203ENST00000415609 PPP1R16BQ96T49 567 aa13.08□□□□□ -0.32
UBA3-203ENST00000415609 ROPN1BQ9BZX4 212 aaPredicted RBP13.08□□□□□ -0.32
UBA3-203ENST00000415609 ROPN1Q9HAT0 212 aaPredicted RBP13.08□□□□□ -0.32
UBA3-203ENST00000415609 ERAP1Q9NZ08 941 aa13.08□□□□□ -0.32
UBA3-203ENST00000415609 PCDHGC3Q9UN70 934 aa13.08□□□□□ -0.32
UBA3-203ENST00000415609 TNFSF13BQ9Y275 285 aa13.08□□□□□ -0.32
UBA3-203ENST00000415609 IVNS1ABPQ9Y6Y0 642 aa13.08□□□□□ -0.32
UBA3-203ENST00000415609 ANK1P16157 1881 aa13.07□□□□□ -0.32
UBA3-203ENST00000415609 TCRBV5S1A1TA0A578 114 aa13.07□□□□□ -0.32
UBA3-203ENST00000415609 GOLGA8SH3BPF8 625 aa13.07□□□□□ -0.32
UBA3-203ENST00000415609 ASAP2O43150 1006 aa13.07□□□□□ -0.32
UBA3-203ENST00000415609 TJP3O95049 919 aa13.07□□□□□ -0.32
UBA3-203ENST00000415609 C22orf31O95567 290 aa13.07□□□□□ -0.32
UBA3-203ENST00000415609 NFICP08651 508 aa13.07□□□□□ -0.32
UBA3-203ENST00000415609 PHKA2P46019 1235 aa13.07□□□□□ -0.32
UBA3-203ENST00000415609 LIG3P49916 1009 aa13.07□□□□□ -0.32
UBA3-203ENST00000415609 PIGHQ14442 188 aaPredicted RBP13.07□□□□□ -0.32
UBA3-203ENST00000415609 QPCTQ16769 361 aa13.07□□□□□ -0.32
UBA3-203ENST00000415609 CCDC38Q502W7 563 aa13.07□□□□□ -0.32
UBA3-203ENST00000415609 ZNF667Q5HYK9 610 aa13.07□□□□□ -0.32
UBA3-203ENST00000415609 ERMARDQ5T6L9 678 aa13.07□□□□□ -0.32
UBA3-203ENST00000415609 MFSD7Q6UXD7 560 aa13.07□□□□□ -0.32
UBA3-203ENST00000415609 WDTC1Q8N5D0 677 aa13.07□□□□□ -0.32
UBA3-203ENST00000415609 OTUD6BQ8N6M0 293 aa13.07□□□□□ -0.32
UBA3-203ENST00000415609 ACSF2Q96CM8 615 aaPredicted RBP13.07□□□□□ -0.32
UBA3-203ENST00000415609 PWWP2AQ96N64 755 aa13.07□□□□□ -0.32
UBA3-203ENST00000415609 RNPEPQ9H4A4 650 aa13.07□□□□□ -0.32
UBA3-203ENST00000415609 NEU2Q9Y3R4 380 aa13.07□□□□□ -0.32
UBA3-203ENST00000415609 ASB14A6NK59 587 aa13.06□□□□□ -0.32
UBA3-203ENST00000415609 MEFVO15553 781 aaPredicted RBP13.06□□□□□ -0.32
UBA3-203ENST00000415609 MED7O43513 233 aa13.06□□□□□ -0.32
UBA3-203ENST00000415609 TTC4O95801 387 aa13.06□□□□□ -0.32
UBA3-203ENST00000415609 IQCF3P0C7M6 154 aa13.06□□□□□ -0.32
UBA3-203ENST00000415609 CDH5P33151 784 aaPredicted RBP13.06□□□□□ -0.32
UBA3-203ENST00000415609 LMNB2Q03252 620 aa13.06□□□□□ -0.32
UBA3-203ENST00000415609 KYNUQ16719 465 aa13.06□□□□□ -0.32
UBA3-203ENST00000415609 WDR72Q3MJ13 1102 aa13.06□□□□□ -0.32
UBA3-203ENST00000415609 GJC2Q5T442 439 aaPredicted RBP13.06□□□□□ -0.32
UBA3-203ENST00000415609 RNF187Q5TA31 235 aaPredicted RBP13.06□□□□□ -0.32
UBA3-203ENST00000415609 LRRC38Q5VT99 294 aa13.06□□□□□ -0.32
UBA3-203ENST00000415609 MFSD5Q6N075 450 aa13.06□□□□□ -0.32
UBA3-203ENST00000415609 SPOCD1Q6ZMY3 1216 aa13.06□□□□□ -0.32
UBA3-203ENST00000415609 ARMCX2Q7L311 632 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms