RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 PBX1P40424 430 aa17.7■□□□□ 0.42
TSPAN4-208ENST00000409531 LEXMQ3ZCV2 418 aa17.7■□□□□ 0.42
TSPAN4-208ENST00000409531 ENOSF1Q7L5Y1 443 aa17.7■□□□□ 0.42
TSPAN4-208ENST00000409531 TMEM130Q8N3G9 435 aa17.7■□□□□ 0.42
TSPAN4-208ENST00000409531 C3orf58Q8NDZ4 430 aa17.7■□□□□ 0.42
TSPAN4-208ENST00000409531 NUP58Q9BVL2 599 aa17.7■□□□□ 0.42
TSPAN4-208ENST00000409531 VN1R3Q9BXE9 311 aa17.7■□□□□ 0.42
TSPAN4-208ENST00000409531 NIF3L1Q9GZT8 377 aa17.7■□□□□ 0.42
TSPAN4-208ENST00000409531 FAM124BQ9H5Z6 455 aaPredicted RBP17.7■□□□□ 0.42
TSPAN4-208ENST00000409531 ITIH6Q6UXX5 1313 aa17.69■□□□□ 0.42
TSPAN4-208ENST00000409531 LINC01565O15544 149 aa17.69■□□□□ 0.42
TSPAN4-208ENST00000409531 HUS1O60921 280 aa17.69■□□□□ 0.42
TSPAN4-208ENST00000409531 EFEMP2O95967 443 aa17.69■□□□□ 0.42
TSPAN4-208ENST00000409531 TRIM21P19474 475 aaKnown RBP17.69■□□□□ 0.42
TSPAN4-208ENST00000409531 AARSP49588 968 aaKnown RBP eCLIP17.69■□□□□ 0.428e-6■■■■■ 52.4
TSPAN4-208ENST00000409531 KCNQ1P51787 676 aa17.69■□□□□ 0.42
TSPAN4-208ENST00000409531 GCNT1Q02742 428 aa17.69■□□□□ 0.42
TSPAN4-208ENST00000409531 KLHDC7AQ5VTJ3 777 aa17.69■□□□□ 0.42
TSPAN4-208ENST00000409531 SPECC1LQ69YQ0 1117 aa17.69■□□□□ 0.42
TSPAN4-208ENST00000409531 SMYD5Q6GMV2 418 aa17.69■□□□□ 0.42
TSPAN4-208ENST00000409531 DSTYKQ6XUX3 929 aa17.69■□□□□ 0.42
TSPAN4-208ENST00000409531 DPH6Q7L8W6 267 aa17.69■□□□□ 0.42
TSPAN4-208ENST00000409531 PPM1KQ8N3J5 372 aa17.69■□□□□ 0.42
TSPAN4-208ENST00000409531 RABGGTAQ92696 567 aa17.69■□□□□ 0.42
TSPAN4-208ENST00000409531 FAM207AQ9NSI2 230 aaPredicted RBP17.69■□□□□ 0.42
TSPAN4-208ENST00000409531 NXF1Q9UBU9 619 aaKnown RBP17.69■□□□□ 0.42
TSPAN4-208ENST00000409531 FBXL5Q9UKA1 691 aa17.69■□□□□ 0.42
TSPAN4-208ENST00000409531 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.69■□□□□ 0.42
TSPAN4-208ENST00000409531 SNX9Q9Y5X1 595 aa17.69■□□□□ 0.42
TSPAN4-208ENST00000409531 SF3B1O75533 1304 aaKnown RBP eCLIP17.69■□□□□ 0.42
TSPAN4-208ENST00000409531 XIRP2A4UGR9 3374 aa17.69■□□□□ 0.42
TSPAN4-208ENST00000409531 H3BQ06 376 aaPredicted RBP17.68■□□□□ 0.42
TSPAN4-208ENST00000409531 LRRN2O75325 713 aa17.68■□□□□ 0.42
TSPAN4-208ENST00000409531 ADCY5O95622 1261 aa17.68■□□□□ 0.42
TSPAN4-208ENST00000409531 SOD2P04179 222 aa17.68■□□□□ 0.42
TSPAN4-208ENST00000409531 FAM163BP0C2L3 166 aa17.68■□□□□ 0.42
TSPAN4-208ENST00000409531 ODC1P11926 461 aa17.68■□□□□ 0.42
TSPAN4-208ENST00000409531 MFAP3P55082 362 aa17.68■□□□□ 0.42
TSPAN4-208ENST00000409531 YWHAEP62258 255 aaKnown RBP17.68■□□□□ 0.42
TSPAN4-208ENST00000409531 DLX2Q07687 328 aaPredicted RBP17.68■□□□□ 0.42
TSPAN4-208ENST00000409531 LRMPQ12912 555 aa17.68■□□□□ 0.42
TSPAN4-208ENST00000409531 TRIM14Q14142 442 aa17.68■□□□□ 0.42
TSPAN4-208ENST00000409531 FIGNQ5HY92 759 aa17.68■□□□□ 0.42
TSPAN4-208ENST00000409531 SCARA3Q6AZY7 606 aa17.68■□□□□ 0.42
TSPAN4-208ENST00000409531 SPOPLQ6IQ16 392 aa17.68■□□□□ 0.42
TSPAN4-208ENST00000409531 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.68■□□□□ 0.42
TSPAN4-208ENST00000409531 VSTM4Q8IW00 320 aa17.68■□□□□ 0.42
TSPAN4-208ENST00000409531 RNF168Q8IYW5 571 aaPredicted RBP17.68■□□□□ 0.42
TSPAN4-208ENST00000409531 TTC39CQ8N584 583 aa17.68■□□□□ 0.42
TSPAN4-208ENST00000409531 TOP6BLQ8N6T0 577 aa17.68■□□□□ 0.42
TSPAN4-208ENST00000409531 APPL2Q8NEU8 664 aa17.68■□□□□ 0.42
TSPAN4-208ENST00000409531 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.68■□□□□ 0.42
TSPAN4-208ENST00000409531 HASPINQ8TF76 798 aa17.68■□□□□ 0.42
TSPAN4-208ENST00000409531 TATDN2Q93075 761 aa17.68■□□□□ 0.42
TSPAN4-208ENST00000409531 JAKMIP2Q96AA8 810 aa17.68■□□□□ 0.42
TSPAN4-208ENST00000409531 SUSD3Q96L08 255 aa17.68■□□□□ 0.42
TSPAN4-208ENST00000409531 SENP8Q96LD8 212 aa17.68■□□□□ 0.42
TSPAN4-208ENST00000409531 MMS19Q96T76 1030 aa17.68■□□□□ 0.42
TSPAN4-208ENST00000409531 CYP3A43Q9HB55 503 aa17.68■□□□□ 0.42
TSPAN4-208ENST00000409531 APOBEC3GQ9HC16 384 aaKnown RBP17.68■□□□□ 0.42
TSPAN4-208ENST00000409531 SIX2Q9NPC8 291 aa17.68■□□□□ 0.42
TSPAN4-208ENST00000409531 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.68■□□□□ 0.426e-7■■■■■ 157.5
TSPAN4-208ENST00000409531 DSEQ9UL01 958 aa17.68■□□□□ 0.42
TSPAN4-208ENST00000409531 SSX2IPQ9Y2D8 614 aa17.68■□□□□ 0.42
TSPAN4-208ENST00000409531 F8W810 466 aa17.67■□□□□ 0.42
TSPAN4-208ENST00000409531 M0QZQ0 153 aa17.67■□□□□ 0.42
TSPAN4-208ENST00000409531 TNFRSF10AO00220 468 aa17.67■□□□□ 0.42
TSPAN4-208ENST00000409531 CYB561D2O14569 222 aa17.67■□□□□ 0.42
TSPAN4-208ENST00000409531 SPTLC1O15269 473 aa17.67■□□□□ 0.42
TSPAN4-208ENST00000409531 LILRB3O75022 631 aa17.67■□□□□ 0.42
TSPAN4-208ENST00000409531 TPM1P09493 284 aa17.67■□□□□ 0.42
TSPAN4-208ENST00000409531 UCHL3P15374 230 aa17.67■□□□□ 0.42
TSPAN4-208ENST00000409531 CDC25BP30305 580 aa17.67■□□□□ 0.42
TSPAN4-208ENST00000409531 CA8P35219 290 aa17.67■□□□□ 0.42
TSPAN4-208ENST00000409531 NDUFV1P49821 464 aa17.67■□□□□ 0.42
TSPAN4-208ENST00000409531 CUL2Q13617 745 aa17.67■□□□□ 0.42
TSPAN4-208ENST00000409531 KCNC3Q14003 757 aa17.67■□□□□ 0.42
TSPAN4-208ENST00000409531 PUS10Q3MIT2 529 aaKnown RBP17.67■□□□□ 0.42
TSPAN4-208ENST00000409531 PHLDB3Q6NSJ2 640 aa17.67■□□□□ 0.42
TSPAN4-208ENST00000409531 FUT10Q6P4F1 479 aa17.67■□□□□ 0.42
TSPAN4-208ENST00000409531 CD300LGQ6UXG3 332 aa17.67■□□□□ 0.42
TSPAN4-208ENST00000409531 TMEM184AQ6ZMB5 413 aa17.67■□□□□ 0.42
TSPAN4-208ENST00000409531 TAS1R1Q7RTX1 841 aa17.67■□□□□ 0.42
TSPAN4-208ENST00000409531 TMEM86AQ8N2M4 240 aa17.67■□□□□ 0.42
TSPAN4-208ENST00000409531 SPATA18Q8TC71 538 aa17.67■□□□□ 0.42
TSPAN4-208ENST00000409531 AUTS2Q8WXX7 1259 aa17.67■□□□□ 0.42
TSPAN4-208ENST00000409531 BCO2Q9BYV7 579 aa17.67■□□□□ 0.42
TSPAN4-208ENST00000409531 GPR62Q9BZJ7 368 aa17.67■□□□□ 0.42
TSPAN4-208ENST00000409531 EDEM3Q9BZQ6 932 aa17.67■□□□□ 0.42
TSPAN4-208ENST00000409531 UBE2TQ9NPD8 197 aaPredicted RBP17.67■□□□□ 0.42
TSPAN4-208ENST00000409531 MRPL17Q9NRX2 175 aaKnown RBP17.67■□□□□ 0.42
TSPAN4-208ENST00000409531 CEP72Q9P209 647 aa17.67■□□□□ 0.42
TSPAN4-208ENST00000409531 ATG2AQ2TAZ0 1938 aa17.66■□□□□ 0.42
TSPAN4-208ENST00000409531 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.66■□□□□ 0.42
TSPAN4-208ENST00000409531 SYN3O14994 580 aa17.66■□□□□ 0.42
TSPAN4-208ENST00000409531 TBX10O75333 385 aa17.66■□□□□ 0.42
TSPAN4-208ENST00000409531 GLP2RO95838 553 aa17.66■□□□□ 0.42
TSPAN4-208ENST00000409531 TYMPP19971 482 aa17.66■□□□□ 0.42
TSPAN4-208ENST00000409531 ASPAP45381 313 aa17.66■□□□□ 0.42
TSPAN4-208ENST00000409531 BRCC3P46736 316 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms