RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 GPATCH2LQ9NWQ4 482 aa14.37□□□□□ -0.11
VAPA-202ENST00000400000 PTCH1Q13635 1447 aa14.37□□□□□ -0.11
VAPA-202ENST00000400000 SREBF2Q12772 1141 aa14.37□□□□□ -0.11
VAPA-202ENST00000400000 C3orf62Q6ZUJ4 267 aa14.37□□□□□ -0.11
VAPA-202ENST00000400000 KIF2BQ8N4N8 673 aa14.37□□□□□ -0.11
VAPA-202ENST00000400000 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.37□□□□□ -0.11
VAPA-202ENST00000400000 PPP1R14AQ96A00 147 aa14.37□□□□□ -0.11
VAPA-202ENST00000400000 WDR24Q96S15 920 aa14.37□□□□□ -0.11
VAPA-202ENST00000400000 ZNF556Q9HAH1 456 aa14.37□□□□□ -0.11
VAPA-202ENST00000400000 NEU2Q9Y3R4 380 aa14.37□□□□□ -0.11
VAPA-202ENST00000400000 TIMM13Q9Y5L4 95 aaPredicted RBP14.37□□□□□ -0.11
VAPA-202ENST00000400000 PHF20L1A8MW92 1017 aa14.37□□□□□ -0.11
VAPA-202ENST00000400000 NBPF26B4DH59 902 aa14.37□□□□□ -0.11
VAPA-202ENST00000400000 LZTS3O60299 673 aaPredicted RBP14.37□□□□□ -0.11
VAPA-202ENST00000400000 ASS1P00966 412 aaKnown RBP14.37□□□□□ -0.11
VAPA-202ENST00000400000 CHN1P15882 459 aa14.37□□□□□ -0.11
VAPA-202ENST00000400000 PLCL1Q15111 1095 aa14.37□□□□□ -0.11
VAPA-202ENST00000400000 CNGA3Q16281 694 aa14.37□□□□□ -0.11
VAPA-202ENST00000400000 ALKBH2Q6NS38 261 aa14.37□□□□□ -0.11
VAPA-202ENST00000400000 NBPF15Q8N660 670 aa14.37□□□□□ -0.11
VAPA-202ENST00000400000 SCFD1Q8WVM8 642 aa14.37□□□□□ -0.11
VAPA-202ENST00000400000 HPDLQ96IR7 371 aa14.37□□□□□ -0.11
VAPA-202ENST00000400000 APOL2Q9BQE5 337 aa14.37□□□□□ -0.11
VAPA-202ENST00000400000 TRIM62Q9BVG3 475 aa14.37□□□□□ -0.11
VAPA-202ENST00000400000 NFKBIZQ9BYH8 718 aa14.37□□□□□ -0.11
VAPA-202ENST00000400000 MYMKA6NI61 221 aa14.37□□□□□ -0.11
VAPA-202ENST00000400000 GALCP54803 685 aa14.37□□□□□ -0.11
VAPA-202ENST00000400000 SOX10P56693 466 aa14.37□□□□□ -0.11
VAPA-202ENST00000400000 TDRD10Q5VZ19 366 aaKnown RBP14.37□□□□□ -0.11
VAPA-202ENST00000400000 DDX42Q86XP3 938 aaKnown RBP eCLIP14.37□□□□□ -0.11
VAPA-202ENST00000400000 SEPT1Q8WYJ6 367 aa14.37□□□□□ -0.11
VAPA-202ENST00000400000 RFFLQ8WZ73 363 aa14.37□□□□□ -0.11
VAPA-202ENST00000400000 MED15Q96RN5 788 aa14.37□□□□□ -0.11
VAPA-202ENST00000400000 TARS2Q9BW92 718 aaKnown RBP14.37□□□□□ -0.11
VAPA-202ENST00000400000 CYP4F12Q9HCS2 524 aa14.37□□□□□ -0.11
VAPA-202ENST00000400000 OVOS2A0A0G2JMS6 1433 aa14.37□□□□□ -0.11
VAPA-202ENST00000400000 OVOS2A0A0J9YW53 1432 aa14.37□□□□□ -0.11
VAPA-202ENST00000400000 OVOS2Q6IE36 1432 aa14.37□□□□□ -0.11
VAPA-202ENST00000400000 TPST1O60507 370 aa14.37□□□□□ -0.11
VAPA-202ENST00000400000 NR3C2P08235 984 aa14.37□□□□□ -0.11
VAPA-202ENST00000400000 GLRBP48167 497 aa14.37□□□□□ -0.11
VAPA-202ENST00000400000 EFNA5P52803 228 aa14.37□□□□□ -0.11
VAPA-202ENST00000400000 HPCAP84074 193 aa14.37□□□□□ -0.11
VAPA-202ENST00000400000 DMTNQ08495 405 aa14.37□□□□□ -0.11
VAPA-202ENST00000400000 HIC1Q14526 733 aa14.37□□□□□ -0.11
VAPA-202ENST00000400000 KCNT1Q5JUK3 1230 aa14.37□□□□□ -0.11
VAPA-202ENST00000400000 OTOAQ7RTW8 1153 aa14.37□□□□□ -0.11
VAPA-202ENST00000400000 DIS3LQ8TF46 1054 aaKnown RBP14.37□□□□□ -0.11
VAPA-202ENST00000400000 POP1Q99575 1024 aaKnown RBP14.37□□□□□ -0.11
VAPA-202ENST00000400000 ADAM21Q9UKJ8 722 aa14.37□□□□□ -0.11
VAPA-202ENST00000400000 XPO1O14980 1071 aaKnown RBP14.36□□□□□ -0.11
VAPA-202ENST00000400000 MAP3K7CLP57077 242 aa14.36□□□□□ -0.11
VAPA-202ENST00000400000 PTK7Q13308 1070 aa14.36□□□□□ -0.11
VAPA-202ENST00000400000 RABGAP1LQ5R372 815 aa14.36□□□□□ -0.11
VAPA-202ENST00000400000 PALMDQ9NP74 551 aa14.36□□□□□ -0.11
VAPA-202ENST00000400000 M0QYT0 321 aa14.36□□□□□ -0.11
VAPA-202ENST00000400000 TSPAN3O60637 253 aa14.36□□□□□ -0.11
VAPA-202ENST00000400000 FGFR1P11362 822 aa14.36□□□□□ -0.11
VAPA-202ENST00000400000 CETPP11597 493 aa14.36□□□□□ -0.11
VAPA-202ENST00000400000 TCF3P15923 654 aa14.36□□□□□ -0.11
VAPA-202ENST00000400000 PLD3Q8IV08 490 aa14.36□□□□□ -0.11
VAPA-202ENST00000400000 RIN2Q8WYP3 895 aaPredicted RBP14.36□□□□□ -0.11
VAPA-202ENST00000400000 UBP1Q9NZI7 540 aa14.36□□□□□ -0.11
VAPA-202ENST00000400000 PVALEFA0A1B0GWK0 134 aa14.36□□□□□ -0.11
VAPA-202ENST00000400000 SH3BGRLO75368 114 aa14.36□□□□□ -0.11
VAPA-202ENST00000400000 USP11P51784 963 aa14.36□□□□□ -0.11
VAPA-202ENST00000400000 CAV1Q03135 178 aa14.36□□□□□ -0.11
VAPA-202ENST00000400000 MYL4P12829 197 aa14.36□□□□□ -0.11
VAPA-202ENST00000400000 MLNP12872 115 aa14.36□□□□□ -0.11
VAPA-202ENST00000400000 FMO5P49326 533 aa14.36□□□□□ -0.11
VAPA-202ENST00000400000 CPT1AP50416 773 aa14.36□□□□□ -0.11
VAPA-202ENST00000400000 MRPL28Q13084 256 aaKnown RBP14.36□□□□□ -0.11
VAPA-202ENST00000400000 KIAA2013Q8IYS2 634 aa14.36□□□□□ -0.11
VAPA-202ENST00000400000 RCOR2Q8IZ40 523 aa14.36□□□□□ -0.11
VAPA-202ENST00000400000 STX19Q8N4C7 294 aa14.36□□□□□ -0.11
VAPA-202ENST00000400000 NT5C1AQ9BXI3 368 aa14.36□□□□□ -0.11
VAPA-202ENST00000400000 TUFT1Q9NNX1 390 aa14.36□□□□□ -0.11
VAPA-202ENST00000400000 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.36□□□□□ -0.11
VAPA-202ENST00000400000 PIH1D1Q9NWS0 290 aaKnown RBP14.36□□□□□ -0.11
VAPA-202ENST00000400000 PLA2G4AP47712 749 aa14.36□□□□□ -0.11
VAPA-202ENST00000400000 SV2CQ496J9 727 aa14.36□□□□□ -0.11
VAPA-202ENST00000400000 ARHGAP15Q53QZ3 475 aa14.36□□□□□ -0.11
VAPA-202ENST00000400000 STRIP1Q5VSL9 837 aa14.36□□□□□ -0.11
VAPA-202ENST00000400000 ZSWIM2Q8NEG5 633 aa14.36□□□□□ -0.11
VAPA-202ENST00000400000 GLT1D1Q96MS3 346 aa14.36□□□□□ -0.11
VAPA-202ENST00000400000 RBM15Q96T37 977 aaKnown RBP eCLIP14.36□□□□□ -0.112e-8■■□□□ 14.3
VAPA-202ENST00000400000 PRR23D1E9PI22 279 aaPredicted RBP14.35□□□□□ -0.11
VAPA-202ENST00000400000 ARHGEF9O43307 516 aa14.35□□□□□ -0.11
VAPA-202ENST00000400000 SMNDC1O75940 238 aaKnown RBP eCLIP14.35□□□□□ -0.111e-7■■■□□ 18.1
VAPA-202ENST00000400000 PRR23D2P0DMB1 279 aaPredicted RBP14.35□□□□□ -0.11
VAPA-202ENST00000400000 PPIEQ9UNP9 301 aaKnown RBP14.35□□□□□ -0.11
VAPA-202ENST00000400000 SCAMP3O14828 347 aaKnown RBP14.35□□□□□ -0.11
VAPA-202ENST00000400000 ANO5Q75V66 913 aa14.35□□□□□ -0.11
VAPA-202ENST00000400000 ACOT1Q86TX2 421 aa14.35□□□□□ -0.11
VAPA-202ENST00000400000 AATKQ6ZMQ8 1374 aa14.35□□□□□ -0.11
VAPA-202ENST00000400000 TARSL2A2RTX5 802 aaKnown RBP14.35□□□□□ -0.11
VAPA-202ENST00000400000 H0YC42 278 aa14.35□□□□□ -0.11
VAPA-202ENST00000400000 HSPA9P38646 679 aaKnown RBP14.35□□□□□ -0.11
VAPA-202ENST00000400000 ZNF543Q08ER8 600 aa14.35□□□□□ -0.11
VAPA-202ENST00000400000 STX3Q13277 289 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms