RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 TGDSO95455 350 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 PRKCBP05771 671 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 RXRAP19793 462 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 CD40LGP29965 261 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 ABCG1P45844 678 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 FAM173BQ6P4H8 233 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 ATAD1Q8NBU5 361 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 SETDB2Q96T68 719 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 PCDH12Q9NPG4 1184 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 PYCARDQ9ULZ3 195 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 L1RE1Q9UN81 338 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 MAPK8IP1Q9UQF2 711 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 GJA3Q9Y6H8 435 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 BTN3A1O00481 513 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 DNAJB2P25686 324 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 CPT1BQ92523 772 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 VPS35Q96QK1 796 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 BRINP2Q9C0B6 783 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 MLXIPLQ9NP71 852 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 SLC5A4Q9NY91 659 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 GLS2Q9UI32 602 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 KPNA6O60684 536 aa13.35□□□□□ -0.27
CCBE1-201ENST00000398179 DBTP11182 482 aaKnown RBP13.35□□□□□ -0.27
CCBE1-201ENST00000398179 NMT1P30419 496 aaKnown RBP13.35□□□□□ -0.27
CCBE1-201ENST00000398179 TTC39BQ5VTQ0 682 aaPredicted RBP13.35□□□□□ -0.27
CCBE1-201ENST00000398179 PTRHD1Q6GMV3 140 aaKnown RBP13.35□□□□□ -0.27
CCBE1-201ENST00000398179 MTHFD1LQ6UB35 978 aa13.35□□□□□ -0.27
CCBE1-201ENST00000398179 TIGD4Q8IY51 512 aa13.35□□□□□ -0.27
CCBE1-201ENST00000398179 CACTIN-AS1Q8N1I8 211 aa13.35□□□□□ -0.27
CCBE1-201ENST00000398179 ATPAF2Q8N5M1 289 aa13.35□□□□□ -0.27
CCBE1-201ENST00000398179 DTX3LQ8TDB6 740 aa13.35□□□□□ -0.27
CCBE1-201ENST00000398179 ATP13A3Q9H7F0 1226 aa13.35□□□□□ -0.27
CCBE1-201ENST00000398179 PCDHA12Q9UN75 941 aa13.35□□□□□ -0.27
CCBE1-201ENST00000398179 COQ6Q9Y2Z9 468 aa13.35□□□□□ -0.27
CCBE1-201ENST00000398179 TCF7P36402 384 aaPredicted RBP13.35□□□□□ -0.27
CCBE1-201ENST00000398179 ARCN1P48444 511 aaKnown RBP13.35□□□□□ -0.27
CCBE1-201ENST00000398179 PHC2Q8IXK0 858 aa13.35□□□□□ -0.27
CCBE1-201ENST00000398179 CCDC185Q8N715 623 aa13.35□□□□□ -0.27
CCBE1-201ENST00000398179 FAM83GA6ND36 823 aa13.35□□□□□ -0.27
CCBE1-201ENST00000398179 NQO1P15559 274 aaKnown RBP13.35□□□□□ -0.27
CCBE1-201ENST00000398179 ACSL1P33121 698 aa13.35□□□□□ -0.27
CCBE1-201ENST00000398179 AGAP3Q96P47 875 aa13.35□□□□□ -0.27
CCBE1-201ENST00000398179 KRT12Q99456 494 aa13.35□□□□□ -0.27
CCBE1-201ENST00000398179 RTFDC1Q9BY42 306 aaPredicted RBP13.35□□□□□ -0.27
CCBE1-201ENST00000398179 WDR12Q9GZL7 423 aaKnown RBP13.35□□□□□ -0.27
CCBE1-201ENST00000398179 ARMC1Q9NVT9 282 aa13.35□□□□□ -0.27
CCBE1-201ENST00000398179 TUBGCP4Q9UGJ1 667 aa13.35□□□□□ -0.27
CCBE1-201ENST00000398179 FAM153AQ9UHL3 310 aa13.35□□□□□ -0.27
CCBE1-201ENST00000398179 PTBP2Q9UKA9 531 aaKnown RBP13.35□□□□□ -0.27
CCBE1-201ENST00000398179 GNGT2O14610 69 aa13.35□□□□□ -0.27
CCBE1-201ENST00000398179 HNF1AP20823 631 aa13.35□□□□□ -0.27
CCBE1-201ENST00000398179 NLRP12P59046 1061 aa13.35□□□□□ -0.27
CCBE1-201ENST00000398179 ITGADQ13349 1161 aa13.35□□□□□ -0.27
CCBE1-201ENST00000398179 BEND6Q5SZJ8 279 aaPredicted RBP13.35□□□□□ -0.27
CCBE1-201ENST00000398179 ATG14Q6ZNE5 492 aa13.35□□□□□ -0.27
CCBE1-201ENST00000398179 SNX31Q8N9S9 440 aa13.35□□□□□ -0.27
CCBE1-201ENST00000398179 MARCH10Q8NA82 808 aaPredicted RBP13.35□□□□□ -0.27
CCBE1-201ENST00000398179 CERKQ8TCT0 537 aa13.35□□□□□ -0.27
CCBE1-201ENST00000398179 ATL1Q8WXF7 558 aa13.35□□□□□ -0.27
CCBE1-201ENST00000398179 HINFPQ9BQA5 517 aa13.35□□□□□ -0.27
CCBE1-201ENST00000398179 HERPUD2Q9BSE4 406 aa13.35□□□□□ -0.27
CCBE1-201ENST00000398179 OXCT2Q9BYC2 517 aaPredicted RBP13.35□□□□□ -0.27
CCBE1-201ENST00000398179 THAP9Q9H5L6 903 aa13.35□□□□□ -0.27
CCBE1-201ENST00000398179 ERBB4Q15303 1308 aa13.35□□□□□ -0.27
CCBE1-201ENST00000398179 TIAM1Q13009 1591 aa13.35□□□□□ -0.27
CCBE1-201ENST00000398179 HTR3EA5X5Y0 456 aa13.35□□□□□ -0.27
CCBE1-201ENST00000398179 HALP42357 657 aa13.35□□□□□ -0.27
CCBE1-201ENST00000398179 COG2Q14746 738 aa13.35□□□□□ -0.27
CCBE1-201ENST00000398179 ZNF772Q68DY9 489 aaPredicted RBP13.35□□□□□ -0.27
CCBE1-201ENST00000398179 KLHL17Q6TDP4 642 aa13.35□□□□□ -0.27
CCBE1-201ENST00000398179 EIF2B3Q9NR50 452 aaKnown RBP13.35□□□□□ -0.27
CCBE1-201ENST00000398179 SNX14Q9Y5W7 946 aa13.35□□□□□ -0.27
CCBE1-201ENST00000398179 BIVM-ERCC5R4GMW8 1640 aa13.34□□□□□ -0.27
CCBE1-201ENST00000398179 NPIPA5A0A0B4J1W7 369 aa13.34□□□□□ -0.27
CCBE1-201ENST00000398179 POTEMA6NI47 508 aa13.34□□□□□ -0.27
CCBE1-201ENST00000398179 GNA11P29992 359 aa13.34□□□□□ -0.27
CCBE1-201ENST00000398179 PLTPP55058 493 aa13.34□□□□□ -0.27
CCBE1-201ENST00000398179 NCAPHQ15003 741 aa13.34□□□□□ -0.27
CCBE1-201ENST00000398179 ETFRF1Q6IPR1 90 aa13.34□□□□□ -0.27
CCBE1-201ENST00000398179 POTEHQ6S545 545 aa13.34□□□□□ -0.27
CCBE1-201ENST00000398179 POTEGQ6S5H5 508 aa13.34□□□□□ -0.27
CCBE1-201ENST00000398179 C3orf58Q8NDZ4 430 aa13.34□□□□□ -0.27
CCBE1-201ENST00000398179 LRRC37BQ96QE4 947 aa13.34□□□□□ -0.27
CCBE1-201ENST00000398179 CPSF3Q9UKF6 684 aaKnown RBP13.34□□□□□ -0.27
CCBE1-201ENST00000398179 ATXN2Q99700 1313 aaKnown RBP13.34□□□□□ -0.27
CCBE1-201ENST00000398179 H7C1Q1 480 aa13.34□□□□□ -0.27
CCBE1-201ENST00000398179 CRABP2P29373 138 aa13.34□□□□□ -0.27
CCBE1-201ENST00000398179 NFX1Q12986 1120 aaKnown RBP13.34□□□□□ -0.27
CCBE1-201ENST00000398179 CAMK2DQ13557 499 aa13.34□□□□□ -0.27
CCBE1-201ENST00000398179 BRDTQ58F21 947 aaPredicted RBP13.34□□□□□ -0.27
CCBE1-201ENST00000398179 BEND5Q7L4P6 421 aa13.34□□□□□ -0.27
CCBE1-201ENST00000398179 ZNF366Q8N895 744 aa13.34□□□□□ -0.27
CCBE1-201ENST00000398179 GTPBP3Q969Y2 492 aaKnown RBP13.34□□□□□ -0.27
CCBE1-201ENST00000398179 ARHGEF3Q9NR81 526 aa13.34□□□□□ -0.27
CCBE1-201ENST00000398179 AGAP1Q9UPQ3 857 aa13.34□□□□□ -0.27
CCBE1-201ENST00000398179 PTCD1O75127 700 aaKnown RBP13.34□□□□□ -0.27
CCBE1-201ENST00000398179 ZBED6P86452 979 aa13.34□□□□□ -0.27
CCBE1-201ENST00000398179 REEP5Q00765 189 aa13.34□□□□□ -0.27
CCBE1-201ENST00000398179 DNAL1Q4LDG9 190 aa13.34□□□□□ -0.27
CCBE1-201ENST00000398179 PDPK2PQ6A1A2 396 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms