RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 TMEM86AQ8N2M4 240 aa8.74□□□□□ -1.01
PTPRD-204ENST00000397606 HASPINQ8TF76 798 aa8.74□□□□□ -1.01
PTPRD-204ENST00000397606 P3H4Q92791 437 aa8.74□□□□□ -1.01
PTPRD-204ENST00000397606 RNF25Q96BH1 459 aaPredicted RBP8.74□□□□□ -1.01
PTPRD-204ENST00000397606 MCEEQ96PE7 176 aa8.74□□□□□ -1.01
PTPRD-204ENST00000397606 EPAS1Q99814 870 aa8.74□□□□□ -1.01
PTPRD-204ENST00000397606 SYT15Q9BQS2 421 aa8.74□□□□□ -1.01
PTPRD-204ENST00000397606 DHX35Q9H5Z1 703 aaKnown RBP8.74□□□□□ -1.01
PTPRD-204ENST00000397606 VPS37BQ9H9H4 285 aa8.74□□□□□ -1.01
PTPRD-204ENST00000397606 DDX43Q9NXZ2 648 aaKnown RBP8.74□□□□□ -1.01
PTPRD-204ENST00000397606 AIPL1Q9NZN9 384 aa8.74□□□□□ -1.01
PTPRD-204ENST00000397606 FRMD3A2A2Y4 597 aa8.74□□□□□ -1.01
PTPRD-204ENST00000397606 PIK3R2O00459 728 aa8.74□□□□□ -1.01
PTPRD-204ENST00000397606 SETSIPP0DME0 302 aa8.74□□□□□ -1.01
PTPRD-204ENST00000397606 SULT1E1P49888 294 aa8.74□□□□□ -1.01
PTPRD-204ENST00000397606 PPP2R5DQ14738 602 aa8.74□□□□□ -1.01
PTPRD-204ENST00000397606 E4F1Q66K89 784 aaPredicted RBP8.74□□□□□ -1.01
PTPRD-204ENST00000397606 DENND2CQ68D51 928 aa8.74□□□□□ -1.01
PTPRD-204ENST00000397606 KRT222Q8N1A0 295 aa8.74□□□□□ -1.01
PTPRD-204ENST00000397606 CCDC63Q8NA47 563 aa8.74□□□□□ -1.01
PTPRD-204ENST00000397606 DPP7Q9UHL4 492 aa8.74□□□□□ -1.01
PTPRD-204ENST00000397606 DERAQ9Y315 318 aa8.74□□□□□ -1.01
PTPRD-204ENST00000397606 HES2Q9Y543 173 aa8.74□□□□□ -1.01
PTPRD-204ENST00000397606 A0A087X0T9 212 aa8.73□□□□□ -1.01
PTPRD-204ENST00000397606 CREB3O43889 395 aa8.73□□□□□ -1.01
PTPRD-204ENST00000397606 ZNF189O75820 626 aaPredicted RBP8.73□□□□□ -1.01
PTPRD-204ENST00000397606 ITGBL1O95965 494 aaPredicted RBP8.73□□□□□ -1.01
PTPRD-204ENST00000397606 MOCS2O96007 188 aaPredicted RBP8.73□□□□□ -1.01
PTPRD-204ENST00000397606 PAEPP09466 180 aa8.73□□□□□ -1.01
PTPRD-204ENST00000397606 FAM228BP0C875 321 aa8.73□□□□□ -1.01
PTPRD-204ENST00000397606 CDH6P55285 790 aa8.73□□□□□ -1.01
PTPRD-204ENST00000397606 MCL1Q07820 350 aa8.73□□□□□ -1.01
PTPRD-204ENST00000397606 NOMO2Q5JPE7 1267 aa8.73□□□□□ -1.01
PTPRD-204ENST00000397606 TDRD10Q5VZ19 366 aaKnown RBP8.73□□□□□ -1.01
PTPRD-204ENST00000397606 LRRC8DQ7L1W4 858 aa8.73□□□□□ -1.01
PTPRD-204ENST00000397606 APBB2Q92870 758 aa8.73□□□□□ -1.01
PTPRD-204ENST00000397606 CNMDO75829 334 aa8.73□□□□□ -1.01
PTPRD-204ENST00000397606 HEXIM1O94992 359 aaKnown RBP8.73□□□□□ -1.01
PTPRD-204ENST00000397606 LRG1P02750 347 aa8.73□□□□□ -1.01
PTPRD-204ENST00000397606 KRT10P13645 584 aa8.73□□□□□ -1.01
PTPRD-204ENST00000397606 RPL9P32969 192 aaKnown RBP8.73□□□□□ -1.01
PTPRD-204ENST00000397606 NDST1P52848 882 aa8.73□□□□□ -1.01
PTPRD-204ENST00000397606 BCAR1P56945 870 aa8.73□□□□□ -1.01
PTPRD-204ENST00000397606 DR1Q01658 176 aa8.73□□□□□ -1.01
PTPRD-204ENST00000397606 ZACNQ401N2 412 aa8.73□□□□□ -1.01
PTPRD-204ENST00000397606 CC2D1AQ6P1N0 951 aaPredicted RBP8.73□□□□□ -1.01
PTPRD-204ENST00000397606 TMC7Q7Z402 723 aa8.73□□□□□ -1.01
PTPRD-204ENST00000397606 FEZF2Q8TBJ5 459 aa8.73□□□□□ -1.01
PTPRD-204ENST00000397606 PXYLP1Q8TE99 480 aa8.73□□□□□ -1.01
PTPRD-204ENST00000397606 MFSD14AQ96MC6 490 aa8.73□□□□□ -1.01
PTPRD-204ENST00000397606 OSBPL9Q96SU4 736 aa8.73□□□□□ -1.01
PTPRD-204ENST00000397606 TJP2Q9UDY2 1190 aa8.73□□□□□ -1.01
PTPRD-204ENST00000397606 LSM7Q9UK45 103 aaKnown RBP8.73□□□□□ -1.01
PTPRD-204ENST00000397606 GABRQQ9UN88 632 aa8.73□□□□□ -1.01
PTPRD-204ENST00000397606 F2P00734 622 aa8.73□□□□□ -1.01
PTPRD-204ENST00000397606 MMEP08473 750 aa8.73□□□□□ -1.01
PTPRD-204ENST00000397606 NFICP08651 508 aa8.73□□□□□ -1.01
PTPRD-204ENST00000397606 ACO1P21399 889 aaKnown RBP8.73□□□□□ -1.01
PTPRD-204ENST00000397606 RAP1GAPP47736 663 aa8.73□□□□□ -1.01
PTPRD-204ENST00000397606 MARSP56192 900 aaKnown RBP8.73□□□□□ -1.01
PTPRD-204ENST00000397606 GJA9P57773 515 aa8.73□□□□□ -1.01
PTPRD-204ENST00000397606 GHRHRQ02643 423 aa8.73□□□□□ -1.01
PTPRD-204ENST00000397606 TSEN34Q9BSV6 310 aaKnown RBP8.73□□□□□ -1.01
PTPRD-204ENST00000397606 HEMGNQ9BXL5 484 aa8.73□□□□□ -1.01
PTPRD-204ENST00000397606 AP1M1Q9BXS5 423 aa8.73□□□□□ -1.01
PTPRD-204ENST00000397606 WRAP73Q9P2S5 460 aaPredicted RBP8.73□□□□□ -1.01
PTPRD-204ENST00000397606 PADI3Q9ULW8 664 aa8.73□□□□□ -1.01
PTPRD-204ENST00000397606 HPCAL4Q9UM19 191 aa8.73□□□□□ -1.01
PTPRD-204ENST00000397606 FBXO21O94952 628 aa8.73□□□□□ -1.01
PTPRD-204ENST00000397606 ATG7O95352 703 aa8.73□□□□□ -1.01
PTPRD-204ENST00000397606 GPD1P21695 349 aa8.73□□□□□ -1.01
PTPRD-204ENST00000397606 XPAP23025 273 aaPredicted RBP8.73□□□□□ -1.01
PTPRD-204ENST00000397606 DLG4P78352 724 aa8.73□□□□□ -1.01
PTPRD-204ENST00000397606 PKN2Q16513 984 aaKnown RBP8.73□□□□□ -1.01
PTPRD-204ENST00000397606 SLC24A5Q71RS6 500 aa8.73□□□□□ -1.01
PTPRD-204ENST00000397606 PAIP2Q9BPZ3 127 aaKnown RBP8.73□□□□□ -1.01
PTPRD-204ENST00000397606 SIK2Q9H0K1 926 aa8.73□□□□□ -1.01
PTPRD-204ENST00000397606 KIF9Q9HAQ2 790 aa8.73□□□□□ -1.01
PTPRD-204ENST00000397606 ENTPD7Q9NQZ7 604 aa8.73□□□□□ -1.01
PTPRD-204ENST00000397606 GTF2IRD1Q9UHL9 959 aa8.73□□□□□ -1.01
PTPRD-204ENST00000397606 GRID2IPA4D2P6 1211 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 PFDN6O15212 129 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 ADCY6O43306 1168 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 SERPINB6P35237 376 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 TNFSF9P41273 254 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 DEUP1Q05D60 604 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 BST2Q10589 180 aaKnown RBP8.72□□□□□ -1.01
PTPRD-204ENST00000397606 GRIK3Q13003 919 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 ORC1Q13415 861 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 FAM171A1Q5VUB5 890 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 CCDC62Q6P9F0 684 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 UNC93AQ86WB7 457 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 EFCAB13Q8IY85 973 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.72□□□□□ -1.01
PTPRD-204ENST00000397606 KCNF1Q9H3M0 494 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 PTCH2Q9Y6C5 1203 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 PLEKP08567 350 aaPredicted RBP8.72□□□□□ -1.01
PTPRD-204ENST00000397606 GUCY2FP51841 1108 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 BASP1P80723 227 aaKnown RBP8.72□□□□□ -1.01
PTPRD-204ENST00000397606 MBTD1Q05BQ5 628 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms