RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 CHRNB1P11230 501 aa9.54□□□□□ -0.88
CAPN3-208ENST00000397204 MYL4P12829 197 aa9.54□□□□□ -0.88
CAPN3-208ENST00000397204 CPB1P15086 417 aa9.54□□□□□ -0.88
CAPN3-208ENST00000397204 CYP3A5P20815 502 aa9.54□□□□□ -0.88
CAPN3-208ENST00000397204 PAX3P23760 479 aa9.54□□□□□ -0.88
CAPN3-208ENST00000397204 GUCY2CP25092 1073 aa9.54□□□□□ -0.88
CAPN3-208ENST00000397204 U2AF2P26368 475 aaKnown RBP eCLIP9.54□□□□□ -0.88
CAPN3-208ENST00000397204 MCM4P33991 863 aa9.54□□□□□ -0.88
CAPN3-208ENST00000397204 PRPHP41219 470 aa9.54□□□□□ -0.88
CAPN3-208ENST00000397204 VIPR2P41587 438 aa9.54□□□□□ -0.88
CAPN3-208ENST00000397204 HMGN5P82970 282 aaKnown RBP9.54□□□□□ -0.88
CAPN3-208ENST00000397204 MAPK7Q13164 816 aa9.54□□□□□ -0.88
CAPN3-208ENST00000397204 GPR17Q13304 367 aa9.54□□□□□ -0.88
CAPN3-208ENST00000397204 PLD1Q13393 1074 aa9.54□□□□□ -0.88
CAPN3-208ENST00000397204 ZBTB6Q15916 424 aa9.54□□□□□ -0.88
CAPN3-208ENST00000397204 ZPBP2Q6X784 338 aa9.54□□□□□ -0.88
CAPN3-208ENST00000397204 DTHD1Q6ZMT9 781 aa9.54□□□□□ -0.88
CAPN3-208ENST00000397204 YAF2Q8IY57 180 aa9.54□□□□□ -0.88
CAPN3-208ENST00000397204 SPEM1Q8N4L4 309 aa9.54□□□□□ -0.88
CAPN3-208ENST00000397204 BEST2Q8NFU1 509 aa9.54□□□□□ -0.88
CAPN3-208ENST00000397204 ZSCAN18Q8TBC5 510 aaPredicted RBP9.54□□□□□ -0.88
CAPN3-208ENST00000397204 CSGALNACT1Q8TDX6 532 aa9.54□□□□□ -0.88
CAPN3-208ENST00000397204 ZBTB45Q96K62 511 aaPredicted RBP9.54□□□□□ -0.88
CAPN3-208ENST00000397204 ZSCAN31Q96LW9 406 aaPredicted RBP9.54□□□□□ -0.88
CAPN3-208ENST00000397204 TSPAN18Q96SJ8 248 aa9.54□□□□□ -0.88
CAPN3-208ENST00000397204 ASB3Q9Y575 518 aa9.54□□□□□ -0.88
CAPN3-208ENST00000397204 CEP295Q9C0D2 2601 aa9.54□□□□□ -0.88
CAPN3-208ENST00000397204 MYH15Q9Y2K3 1946 aa9.54□□□□□ -0.88
CAPN3-208ENST00000397204 KMT2BQ9UMN6 2715 aaPredicted RBP9.54□□□□□ -0.88
CAPN3-208ENST00000397204 VWA8A3KMH1 1905 aa9.53□□□□□ -0.88
CAPN3-208ENST00000397204 OR6C75A6NL08 312 aa9.53□□□□□ -0.88
CAPN3-208ENST00000397204 HEPACAM2A8MVW5 462 aa9.53□□□□□ -0.88
CAPN3-208ENST00000397204 ARNTLO00327 626 aa9.53□□□□□ -0.88
CAPN3-208ENST00000397204 MEFVO15553 781 aaPredicted RBP9.53□□□□□ -0.88
CAPN3-208ENST00000397204 PAPSS2O95340 614 aaPredicted RBP9.53□□□□□ -0.88
CAPN3-208ENST00000397204 FGF19O95750 216 aa9.53□□□□□ -0.88
CAPN3-208ENST00000397204 CCNYL3P0C7X3 344 aa9.53□□□□□ -0.88
CAPN3-208ENST00000397204 PLS3P13797 630 aa9.53□□□□□ -0.88
CAPN3-208ENST00000397204 SCP2P22307 547 aa9.53□□□□□ -0.88
CAPN3-208ENST00000397204 CCNE1P24864 410 aa9.53□□□□□ -0.88
CAPN3-208ENST00000397204 LRPAP1P30533 357 aa9.53□□□□□ -0.88
CAPN3-208ENST00000397204 ALDH1A3P47895 512 aa9.53□□□□□ -0.88
CAPN3-208ENST00000397204 AARSP49588 968 aaKnown RBP eCLIP9.53□□□□□ -0.88
CAPN3-208ENST00000397204 TOB1P50616 345 aaPredicted RBP9.53□□□□□ -0.88
CAPN3-208ENST00000397204 EPHB3P54753 998 aa9.53□□□□□ -0.88
CAPN3-208ENST00000397204 PRR20EP86478 221 aa9.53□□□□□ -0.88
CAPN3-208ENST00000397204 PRR20CP86479 221 aa9.53□□□□□ -0.88
CAPN3-208ENST00000397204 PRR20DP86480 221 aa9.53□□□□□ -0.88
CAPN3-208ENST00000397204 PRR20BP86481 221 aa9.53□□□□□ -0.88
CAPN3-208ENST00000397204 PRR20AP86496 221 aa9.53□□□□□ -0.88
CAPN3-208ENST00000397204 YWHAHQ04917 246 aaPredicted RBP9.53□□□□□ -0.88
CAPN3-208ENST00000397204 MCL1Q07820 350 aa9.53□□□□□ -0.88
CAPN3-208ENST00000397204 FCHO2Q0JRZ9 810 aa9.53□□□□□ -0.88
CAPN3-208ENST00000397204 ST3GAL1Q11201 340 aa9.53□□□□□ -0.88
CAPN3-208ENST00000397204 LRRC32Q14392 662 aa9.53□□□□□ -0.88
CAPN3-208ENST00000397204 KYAT1Q16773 422 aa9.53□□□□□ -0.88
CAPN3-208ENST00000397204 USP37Q86T82 979 aa9.53□□□□□ -0.88
CAPN3-208ENST00000397204 CCDC83Q8IWF9 413 aa9.53□□□□□ -0.88
CAPN3-208ENST00000397204 FAM184AQ8NB25 1140 aa9.53□□□□□ -0.88
CAPN3-208ENST00000397204 TMEM161BQ8NDZ6 487 aa9.53□□□□□ -0.88
CAPN3-208ENST00000397204 RUSC1Q9BVN2 902 aa9.53□□□□□ -0.88
CAPN3-208ENST00000397204 LRRC3Q9BY71 257 aa9.53□□□□□ -0.88
CAPN3-208ENST00000397204 SLITRK6Q9H5Y7 841 aa9.53□□□□□ -0.88
CAPN3-208ENST00000397204 PARD6AQ9NPB6 346 aa9.53□□□□□ -0.88
CAPN3-208ENST00000397204 MIA3Q5JRA6 1907 aa9.52□□□□□ -0.88
CAPN3-208ENST00000397204 TTC26A0AVF1 554 aa9.52□□□□□ -0.89
CAPN3-208ENST00000397204 MYBPHLA2RUH7 354 aa9.52□□□□□ -0.89
CAPN3-208ENST00000397204 DCDC2BA2VCK2 349 aa9.52□□□□□ -0.89
CAPN3-208ENST00000397204 H0YCG3 227 aa9.52□□□□□ -0.89
CAPN3-208ENST00000397204 SLC30A4O14863 429 aa9.52□□□□□ -0.89
CAPN3-208ENST00000397204 XPOTO43592 962 aaKnown RBP9.52□□□□□ -0.89
CAPN3-208ENST00000397204 MAPTP10636 758 aaKnown RBP9.52□□□□□ -0.89
CAPN3-208ENST00000397204 GJA1P17302 382 aa9.52□□□□□ -0.89
CAPN3-208ENST00000397204 WEE1P30291 646 aa9.52□□□□□ -0.89
CAPN3-208ENST00000397204 HOXA6P31267 233 aa9.52□□□□□ -0.89
CAPN3-208ENST00000397204 KPNA1P52294 538 aaPredicted RBP9.52□□□□□ -0.89
CAPN3-208ENST00000397204 SPEM2Q0P670 501 aa9.52□□□□□ -0.89
CAPN3-208ENST00000397204 DUSP4Q13115 394 aa9.52□□□□□ -0.89
CAPN3-208ENST00000397204 SIM2Q14190 667 aaPredicted RBP9.52□□□□□ -0.89
CAPN3-208ENST00000397204 MYBPC2Q14324 1141 aa9.52□□□□□ -0.89
CAPN3-208ENST00000397204 NOLC1Q14978 699 aaKnown RBP eCLIP9.52□□□□□ -0.89
CAPN3-208ENST00000397204 TEAD2Q15562 447 aa9.52□□□□□ -0.89
CAPN3-208ENST00000397204 CSRP2Q16527 193 aa9.52□□□□□ -0.89
CAPN3-208ENST00000397204 PTPRNQ16849 979 aa9.52□□□□□ -0.89
CAPN3-208ENST00000397204 TUSC1Q2TAM9 212 aa9.52□□□□□ -0.89
CAPN3-208ENST00000397204 DGKKQ5KSL6 1271 aa9.52□□□□□ -0.89
CAPN3-208ENST00000397204 DESI1Q6ICB0 168 aa9.52□□□□□ -0.89
CAPN3-208ENST00000397204 CENPPQ6IPU0 288 aa9.52□□□□□ -0.89
CAPN3-208ENST00000397204 DSTYKQ6XUX3 929 aa9.52□□□□□ -0.89
CAPN3-208ENST00000397204 LONP2Q86WA8 852 aa9.52□□□□□ -0.89
CAPN3-208ENST00000397204 RALGPS2Q86X27 583 aaPredicted RBP9.52□□□□□ -0.89
CAPN3-208ENST00000397204 ARID3BQ8IVW6 561 aaPredicted RBP9.52□□□□□ -0.89
CAPN3-208ENST00000397204 SYNPOQ8N3V7 929 aa9.52□□□□□ -0.89
CAPN3-208ENST00000397204 SYT2Q8N9I0 419 aaPredicted RBP9.52□□□□□ -0.89
CAPN3-208ENST00000397204 SHKBP1Q8TBC3 707 aa9.52□□□□□ -0.89
CAPN3-208ENST00000397204 NETO1Q8TDF5 533 aa9.52□□□□□ -0.89
CAPN3-208ENST00000397204 KCNN1Q92952 543 aa9.52□□□□□ -0.89
CAPN3-208ENST00000397204 CNTNAP3BQ96NU0 1288 aa9.52□□□□□ -0.89
CAPN3-208ENST00000397204 MMTAG2Q9BU76 263 aaKnown RBP9.52□□□□□ -0.89
CAPN3-208ENST00000397204 CNTNAP3Q9BZ76 1288 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms