RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 MMS19Q96T76 1030 aa15.94■□□□□ 0.14
CAPN3-207ENST00000397200 TBC1D13Q9NVG8 400 aa15.94■□□□□ 0.14
CAPN3-207ENST00000397200 HYOU1Q9Y4L1 999 aa15.94■□□□□ 0.14
CAPN3-207ENST00000397200 SRGAP2O75044 1071 aa15.94■□□□□ 0.14
CAPN3-207ENST00000397200 HLA-DRAP01903 254 aa15.94■□□□□ 0.14
CAPN3-207ENST00000397200 ITGB3P05106 788 aa15.94■□□□□ 0.14
CAPN3-207ENST00000397200 SOX4Q06945 474 aaPredicted RBP15.94■□□□□ 0.14
CAPN3-207ENST00000397200 DRAP1Q14919 205 aaPredicted RBP15.94■□□□□ 0.14
CAPN3-207ENST00000397200 TMCO2Q7Z6W1 182 aaPredicted RBP15.94■□□□□ 0.14
CAPN3-207ENST00000397200 VPS36Q86VN1 386 aa15.94■□□□□ 0.14
CAPN3-207ENST00000397200 FAM193BQ96PV7 902 aaPredicted RBP15.94■□□□□ 0.14
CAPN3-207ENST00000397200 SLC9A7Q96T83 725 aa15.94■□□□□ 0.14
CAPN3-207ENST00000397200 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.94■□□□□ 0.14
CAPN3-207ENST00000397200 TLR10Q9BXR5 811 aa15.94■□□□□ 0.14
CAPN3-207ENST00000397200 PACSIN1Q9BY11 444 aa15.94■□□□□ 0.14
CAPN3-207ENST00000397200 COQ4Q9Y3A0 265 aa15.94■□□□□ 0.14
CAPN3-207ENST00000397200 A0A0A6YYK5 440 aaPredicted RBP15.93■□□□□ 0.14
CAPN3-207ENST00000397200 H0YGN5 161 aa15.93■□□□□ 0.14
CAPN3-207ENST00000397200 DDX3XO00571 662 aaKnown RBP eCLIP15.93■□□□□ 0.14
CAPN3-207ENST00000397200 CLSTN1O94985 981 aa15.93■□□□□ 0.14
CAPN3-207ENST00000397200 VNN1O95497 513 aa15.93■□□□□ 0.14
CAPN3-207ENST00000397200 POLR2BP30876 1174 aaKnown RBP15.93■□□□□ 0.14
CAPN3-207ENST00000397200 RBP5P82980 135 aa15.93■□□□□ 0.14
CAPN3-207ENST00000397200 TUSC3Q13454 348 aa15.93■□□□□ 0.14
CAPN3-207ENST00000397200 NCOA4Q13772 614 aa15.93■□□□□ 0.14
CAPN3-207ENST00000397200 PAN2Q504Q3 1202 aaKnown RBP15.93■□□□□ 0.14
CAPN3-207ENST00000397200 PHLDB3Q6NSJ2 640 aa15.93■□□□□ 0.14
CAPN3-207ENST00000397200 WDR93Q6P2C0 686 aa15.93■□□□□ 0.14
CAPN3-207ENST00000397200 LRRC43Q8N309 656 aa15.93■□□□□ 0.14
CAPN3-207ENST00000397200 TMEM130Q8N3G9 435 aa15.93■□□□□ 0.14
CAPN3-207ENST00000397200 PHOSPHO2Q8TCD6 241 aa15.93■□□□□ 0.14
CAPN3-207ENST00000397200 OSBPL9Q96SU4 736 aa15.93■□□□□ 0.14
CAPN3-207ENST00000397200 PNKPQ96T60 521 aa15.93■□□□□ 0.14
CAPN3-207ENST00000397200 GOLGA2P5Q9HBQ8 144 aa15.93■□□□□ 0.14
CAPN3-207ENST00000397200 RAB20Q9NX57 234 aa15.93■□□□□ 0.14
CAPN3-207ENST00000397200 SIX4Q9UIU6 781 aa15.93■□□□□ 0.14
CAPN3-207ENST00000397200 AGAP1Q9UPQ3 857 aa15.93■□□□□ 0.14
CAPN3-207ENST00000397200 PDE2AO00408 941 aaPredicted RBP15.92■□□□□ 0.14
CAPN3-207ENST00000397200 CST3P01034 146 aaPredicted RBP15.92■□□□□ 0.14
CAPN3-207ENST00000397200 CCDC172P0C7W6 258 aa15.92■□□□□ 0.14
CAPN3-207ENST00000397200 LRPAP1P30533 357 aa15.92■□□□□ 0.14
CAPN3-207ENST00000397200 WDR44Q5JSH3 913 aa15.92■□□□□ 0.14
CAPN3-207ENST00000397200 C9orf57Q5W0N0 161 aa15.92■□□□□ 0.14
CAPN3-207ENST00000397200 ALKBH5Q6P6C2 394 aaKnown RBP15.92■□□□□ 0.14
CAPN3-207ENST00000397200 LNX1Q8TBB1 728 aaPredicted RBP15.92■□□□□ 0.14
CAPN3-207ENST00000397200 SEMA4DQ92854 862 aa15.92■□□□□ 0.14
CAPN3-207ENST00000397200 ZNF689Q96CS4 500 aaPredicted RBP15.92■□□□□ 0.14
CAPN3-207ENST00000397200 RNPC3Q96LT9 517 aaKnown RBP15.92■□□□□ 0.14
CAPN3-207ENST00000397200 UROC1Q96N76 676 aa15.92■□□□□ 0.14
CAPN3-207ENST00000397200 YME1L1Q96TA2 773 aa15.92■□□□□ 0.14
CAPN3-207ENST00000397200 ZBED2Q9BTP6 218 aa15.92■□□□□ 0.14
CAPN3-207ENST00000397200 IMPG2Q9BZV3 1241 aa15.92■□□□□ 0.14
CAPN3-207ENST00000397200 UBE2OQ9C0C9 1292 aaKnown RBP15.92■□□□□ 0.14
CAPN3-207ENST00000397200 NCANO14594 1321 aa15.92■□□□□ 0.14
CAPN3-207ENST00000397200 CEP290O15078 2479 aa15.91■□□□□ 0.14
CAPN3-207ENST00000397200 TARSL2A2RTX5 802 aaKnown RBP15.91■□□□□ 0.14
CAPN3-207ENST00000397200 GRID2IPA4D2P6 1211 aa15.91■□□□□ 0.14
CAPN3-207ENST00000397200 CASTOR2A6NHX0 329 aa15.91■□□□□ 0.14
CAPN3-207ENST00000397200 ZNF185O15231 689 aa15.91■□□□□ 0.14
CAPN3-207ENST00000397200 GJB5O95377 273 aa15.91■□□□□ 0.14
CAPN3-207ENST00000397200 PNMA6AP0CW24 399 aaPredicted RBP15.91■□□□□ 0.14
CAPN3-207ENST00000397200 ATP2A2P16615 1042 aaKnown RBP15.91■□□□□ 0.14
CAPN3-207ENST00000397200 MYL6P60660 151 aa15.91■□□□□ 0.14
CAPN3-207ENST00000397200 SGSM1Q2NKQ1 1148 aa15.91■□□□□ 0.14
CAPN3-207ENST00000397200 C9orf50Q5SZB4 431 aa15.91■□□□□ 0.14
CAPN3-207ENST00000397200 MEI1Q5TIA1 1274 aa15.91■□□□□ 0.14
CAPN3-207ENST00000397200 RASIP1Q5U651 963 aa15.91■□□□□ 0.14
CAPN3-207ENST00000397200 ZNF280BQ86YH2 543 aa15.91■□□□□ 0.14
CAPN3-207ENST00000397200 CXorf38Q8TB03 319 aa15.91■□□□□ 0.14
CAPN3-207ENST00000397200 DDX27Q96GQ7 796 aaKnown RBP15.91■□□□□ 0.14
CAPN3-207ENST00000397200 ZNF560Q96MR9 790 aa15.91■□□□□ 0.14
CAPN3-207ENST00000397200 COL4A6Q14031 1691 aa15.91■□□□□ 0.14
CAPN3-207ENST00000397200 PODXLO00592 558 aa15.9■□□□□ 0.14
CAPN3-207ENST00000397200 BUB1O43683 1085 aa15.9■□□□□ 0.14
CAPN3-207ENST00000397200 PALMO75781 387 aa15.9■□□□□ 0.14
CAPN3-207ENST00000397200 DDHD2O94830 711 aa15.9■□□□□ 0.14
CAPN3-207ENST00000397200 ATICP31939 592 aa15.9■□□□□ 0.14
CAPN3-207ENST00000397200 RPL9P32969 192 aaKnown RBP15.9■□□□□ 0.14
CAPN3-207ENST00000397200 CLCNKBP51801 687 aa15.9■□□□□ 0.14
CAPN3-207ENST00000397200 DSC1Q08554 894 aa15.9■□□□□ 0.14
CAPN3-207ENST00000397200 MYO1EQ12965 1108 aa15.9■□□□□ 0.14
CAPN3-207ENST00000397200 BTG3Q14201 252 aaPredicted RBP15.9■□□□□ 0.14
CAPN3-207ENST00000397200 IFI16Q16666 785 aaKnown RBP15.9■□□□□ 0.14
CAPN3-207ENST00000397200 ZNF699Q32M78 642 aa15.9■□□□□ 0.14
CAPN3-207ENST00000397200 SCARA3Q6AZY7 606 aa15.9■□□□□ 0.14
CAPN3-207ENST00000397200 HERC6Q8IVU3 1022 aa15.9■□□□□ 0.14
CAPN3-207ENST00000397200 ARHGEF19Q8IW93 802 aa15.9■□□□□ 0.14
CAPN3-207ENST00000397200 CMTR2Q8IYT2 770 aaKnown RBP15.9■□□□□ 0.14
CAPN3-207ENST00000397200 LRRC52Q8N7C0 313 aa15.9■□□□□ 0.14
CAPN3-207ENST00000397200 COG1Q8WTW3 980 aa15.9■□□□□ 0.14
CAPN3-207ENST00000397200 TAF4BQ92750 862 aa15.9■□□□□ 0.14
CAPN3-207ENST00000397200 GDF15Q99988 308 aa15.9■□□□□ 0.14
CAPN3-207ENST00000397200 PI4K2AQ9BTU6 479 aa15.9■□□□□ 0.14
CAPN3-207ENST00000397200 RC3H2Q9HBD1 1191 aaKnown RBP15.9■□□□□ 0.14
CAPN3-207ENST00000397200 ARFGAP3Q9NP61 516 aa15.9■□□□□ 0.14
CAPN3-207ENST00000397200 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.9■□□□□ 0.14
CAPN3-207ENST00000397200 RNF14Q9UBS8 474 aa15.9■□□□□ 0.14
CAPN3-207ENST00000397200 SCN1AP35498 2009 aa15.9■□□□□ 0.14
CAPN3-207ENST00000397200 PIRO00625 290 aa15.9■□□□□ 0.14
CAPN3-207ENST00000397200 CES2O00748 559 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms