RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 MORC2Q9Y6X9 1032 aaPredicted RBP16.36■□□□□ 0.21
GNE-202ENST00000396594 TRPC5OSA6NMA1 111 aa16.36■□□□□ 0.21
GNE-202ENST00000396594 DFFAO00273 331 aa16.36■□□□□ 0.21
GNE-202ENST00000396594 TEX33O43247 280 aa16.36■□□□□ 0.21
GNE-202ENST00000396594 MAGOHP61326 146 aaKnown RBP16.36■□□□□ 0.21
GNE-202ENST00000396594 FKBP1BP68106 108 aa16.36■□□□□ 0.21
GNE-202ENST00000396594 NSUN2Q08J23 767 aaKnown RBP eCLIP16.36■□□□□ 0.21
GNE-202ENST00000396594 CATSPER3Q86XQ3 398 aa16.36■□□□□ 0.21
GNE-202ENST00000396594 PRPF18Q99633 342 aaKnown RBP16.36■□□□□ 0.21
GNE-202ENST00000396594 KBTBD4Q9NVX7 518 aa16.36■□□□□ 0.21
GNE-202ENST00000396594 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.36■□□□□ 0.21
GNE-202ENST00000396594 MROH2AA6NES4 1674 aa16.35■□□□□ 0.21
GNE-202ENST00000396594 CYP3A4P08684 503 aa16.35■□□□□ 0.21
GNE-202ENST00000396594 DSG3P32926 999 aa16.35■□□□□ 0.21
GNE-202ENST00000396594 HERC6Q8IVU3 1022 aa16.35■□□□□ 0.21
GNE-202ENST00000396594 SLC26A7Q8TE54 656 aa16.35■□□□□ 0.21
GNE-202ENST00000396594 TMEM143Q96AN5 459 aa16.35■□□□□ 0.21
GNE-202ENST00000396594 NDFIP2Q9NV92 336 aa16.35■□□□□ 0.21
GNE-202ENST00000396594 PRRG1O14668 218 aa16.35■□□□□ 0.21
GNE-202ENST00000396594 HMOX2P30519 316 aa16.35■□□□□ 0.21
GNE-202ENST00000396594 SLC7A5Q01650 507 aa16.35■□□□□ 0.21
GNE-202ENST00000396594 PPATQ06203 517 aa16.35■□□□□ 0.21
GNE-202ENST00000396594 SERPINB12Q96P63 405 aa16.35■□□□□ 0.21
GNE-202ENST00000396594 UNC45AQ9H3U1 944 aa16.35■□□□□ 0.21
GNE-202ENST00000396594 ZC3H7BQ9UGR2 993 aaKnown RBP16.35■□□□□ 0.21
GNE-202ENST00000396594 ARHGAP10A1A4S6 786 aa16.35■□□□□ 0.21
GNE-202ENST00000396594 DNAJC6O75061 913 aa16.35■□□□□ 0.21
GNE-202ENST00000396594 TADA3O75528 432 aa16.35■□□□□ 0.21
GNE-202ENST00000396594 LRG1P02750 347 aa16.35■□□□□ 0.21
GNE-202ENST00000396594 NAB1Q13506 487 aa16.35■□□□□ 0.21
GNE-202ENST00000396594 GPC2Q8N158 579 aa16.35■□□□□ 0.21
GNE-202ENST00000396594 FAM167BQ9BTA0 163 aa16.35■□□□□ 0.21
GNE-202ENST00000396594 GANQ9H2C0 597 aa16.35■□□□□ 0.21
GNE-202ENST00000396594 GBA2Q9HCG7 927 aaPredicted RBP16.35■□□□□ 0.21
GNE-202ENST00000396594 PLAGL2Q9UPG8 496 aa16.35■□□□□ 0.21
GNE-202ENST00000396594 HPS5Q9UPZ3 1129 aa16.35■□□□□ 0.21
GNE-202ENST00000396594 MAPK1P28482 360 aa16.35■□□□□ 0.21
GNE-202ENST00000396594 TRABDQ9H4I3 376 aa16.35■□□□□ 0.21
GNE-202ENST00000396594 GIMAP4Q9NUV9 329 aa16.35■□□□□ 0.21
GNE-202ENST00000396594 SLCO1B7G3V0H7 640 aa16.34■□□□□ 0.21
GNE-202ENST00000396594 ERBB2P04626 1255 aa16.34■□□□□ 0.21
GNE-202ENST00000396594 KRT72Q14CN4 511 aa16.34■□□□□ 0.21
GNE-202ENST00000396594 NLRP14Q86W24 1093 aa16.34■□□□□ 0.21
GNE-202ENST00000396594 APLFQ8IW19 511 aaPredicted RBP16.34■□□□□ 0.21
GNE-202ENST00000396594 ELAC2Q9BQ52 826 aaKnown RBP16.34■□□□□ 0.21
GNE-202ENST00000396594 DDX47Q9H0S4 455 aaKnown RBP16.34■□□□□ 0.21
GNE-202ENST00000396594 STN1Q9H668 368 aaKnown RBP16.34■□□□□ 0.21
GNE-202ENST00000396594 KRT82Q9NSB4 513 aa16.34■□□□□ 0.21
GNE-202ENST00000396594 GID8Q9NWU2 228 aa16.34■□□□□ 0.21
GNE-202ENST00000396594 MAGEB16A2A368 324 aa16.34■□□□□ 0.21
GNE-202ENST00000396594 GOLGA7BQ2TAP0 167 aa16.34■□□□□ 0.21
GNE-202ENST00000396594 RBM43Q6ZSC3 357 aaKnown RBP16.34■□□□□ 0.21
GNE-202ENST00000396594 VPS37AQ8NEZ2 397 aa16.34■□□□□ 0.21
GNE-202ENST00000396594 MYCBPQ99417 103 aaPredicted RBP16.34■□□□□ 0.21
GNE-202ENST00000396594 MTG1Q9BT17 334 aaPredicted RBP16.34■□□□□ 0.21
GNE-202ENST00000396594 UBE2OQ9C0C9 1292 aaKnown RBP16.34■□□□□ 0.21
GNE-202ENST00000396594 PXMP2Q9NR77 195 aa16.34■□□□□ 0.21
GNE-202ENST00000396594 A0A0G2JND7 137 aa16.34■□□□□ 0.21
GNE-202ENST00000396594 SEC23AQ15436 765 aa16.34■□□□□ 0.21
GNE-202ENST00000396594 OPTNQ96CV9 577 aa16.34■□□□□ 0.21
GNE-202ENST00000396594 E2F6O75461 281 aa16.34■□□□□ 0.21
GNE-202ENST00000396594 CELF2O95319 508 aaKnown RBP16.34■□□□□ 0.21
GNE-202ENST00000396594 HSPA1AP0DMV8 641 aaKnown RBP16.34■□□□□ 0.21
GNE-202ENST00000396594 HSPA1BP0DMV9 641 aaKnown RBP16.34■□□□□ 0.21
GNE-202ENST00000396594 MYBP10242 640 aa16.34■□□□□ 0.21
GNE-202ENST00000396594 RBBP7Q16576 425 aa16.34■□□□□ 0.21
GNE-202ENST00000396594 HIST2H2ACQ16777 129 aaPredicted RBP16.34■□□□□ 0.21
GNE-202ENST00000396594 HIST2H2AA3Q6FI13 130 aa16.34■□□□□ 0.21
GNE-202ENST00000396594 BTNL9Q6UXG8 535 aa16.34■□□□□ 0.21
GNE-202ENST00000396594 COL23A1Q86Y22 540 aaPredicted RBP16.34■□□□□ 0.21
GNE-202ENST00000396594 ATP8B4Q8TF62 1192 aa16.34■□□□□ 0.21
GNE-202ENST00000396594 RIN2Q8WYP3 895 aaPredicted RBP16.34■□□□□ 0.21
GNE-202ENST00000396594 UROC1Q96N76 676 aa16.34■□□□□ 0.21
GNE-202ENST00000396594 SELENONQ9NZV5 590 aa16.34■□□□□ 0.21
GNE-202ENST00000396594 ATP6V1E1P36543 226 aa16.33■□□□□ 0.21
GNE-202ENST00000396594 ACCSLQ4AC99 568 aa16.33■□□□□ 0.21
GNE-202ENST00000396594 FASTKD1Q53R41 847 aaKnown RBP16.33■□□□□ 0.21
GNE-202ENST00000396594 TRIM68Q6AZZ1 485 aa16.33■□□□□ 0.21
GNE-202ENST00000396594 LZTR1Q8N653 840 aa16.33■□□□□ 0.21
GNE-202ENST00000396594 MPP6Q9NZW5 540 aa16.33■□□□□ 0.21
GNE-202ENST00000396594 WHRNQ9P202 907 aa16.33■□□□□ 0.21
GNE-202ENST00000396594 STK39Q9UEW8 545 aa16.33■□□□□ 0.21
GNE-202ENST00000396594 FBXL5Q9UKA1 691 aa16.33■□□□□ 0.21
GNE-202ENST00000396594 HPSEQ9Y251 543 aa16.33■□□□□ 0.21
GNE-202ENST00000396594 ABCC6O95255 1503 aa16.33■□□□□ 0.21
GNE-202ENST00000396594 PSMA3P25788 255 aa16.33■□□□□ 0.21
GNE-202ENST00000396594 OCA2Q04671 838 aa16.33■□□□□ 0.21
GNE-202ENST00000396594 PTPAQ15257 358 aa16.33■□□□□ 0.21
GNE-202ENST00000396594 ZNF280DQ6N043 979 aa16.33■□□□□ 0.21
GNE-202ENST00000396594 C11orf63Q6NUN7 778 aa16.33■□□□□ 0.21
GNE-202ENST00000396594 MMS22LQ6ZRQ5 1243 aa16.33■□□□□ 0.21
GNE-202ENST00000396594 ENGASEQ8NFI3 743 aa16.33■□□□□ 0.21
GNE-202ENST00000396594 SLC20A1Q8WUM9 679 aa16.33■□□□□ 0.21
GNE-202ENST00000396594 PTPRN2Q92932 1015 aa16.33■□□□□ 0.21
GNE-202ENST00000396594 CYFIP2Q96F07 1278 aa16.33■□□□□ 0.21
GNE-202ENST00000396594 PKP3Q9Y446 797 aa16.33■□□□□ 0.21
GNE-202ENST00000396594 TIMM44O43615 452 aa16.33■□□□□ 0.2
GNE-202ENST00000396594 TBC1D12O60347 775 aa16.33■□□□□ 0.2
GNE-202ENST00000396594 EPHX2P34913 555 aa16.33■□□□□ 0.2
GNE-202ENST00000396594 SPDYCQ5MJ68 293 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms