RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 PRPSAP2O60256 369 aa16.99■□□□□ 0.31
PCDH1-203ENST00000394536 ZBED1O96006 694 aa16.99■□□□□ 0.31
PCDH1-203ENST00000394536 LACTB2Q53H82 288 aaPredicted RBP16.99■□□□□ 0.31
PCDH1-203ENST00000394536 C4orf19Q8IY42 314 aa16.99■□□□□ 0.31
PCDH1-203ENST00000394536 AGGF1Q8N302 714 aaeCLIP16.99■□□□□ 0.31
PCDH1-203ENST00000394536 CCDC33Q8N5R6 958 aa16.99■□□□□ 0.31
PCDH1-203ENST00000394536 TMEM161BQ8NDZ6 487 aa16.99■□□□□ 0.31
PCDH1-203ENST00000394536 ACTL9Q8TC94 416 aa16.99■□□□□ 0.31
PCDH1-203ENST00000394536 C12orf65Q9H3J6 166 aaKnown RBP16.99■□□□□ 0.31
PCDH1-203ENST00000394536 EXTL3O43909 919 aa16.98■□□□□ 0.31
PCDH1-203ENST00000394536 PAEPP09466 180 aa16.98■□□□□ 0.31
PCDH1-203ENST00000394536 SKIP12755 728 aa16.98■□□□□ 0.31
PCDH1-203ENST00000394536 GTF2BQ00403 316 aa16.98■□□□□ 0.31
PCDH1-203ENST00000394536 EMC2Q15006 297 aa16.98■□□□□ 0.31
PCDH1-203ENST00000394536 ZNF667Q5HYK9 610 aa16.98■□□□□ 0.31
PCDH1-203ENST00000394536 TTLL6Q8N841 843 aa16.98■□□□□ 0.31
PCDH1-203ENST00000394536 FERMT1Q9BQL6 677 aa16.98■□□□□ 0.31
PCDH1-203ENST00000394536 RAB6BQ9NRW1 208 aa16.98■□□□□ 0.31
PCDH1-203ENST00000394536 PLIN4Q96Q06 1357 aa16.98■□□□□ 0.31
PCDH1-203ENST00000394536 APRTP07741 180 aa16.98■□□□□ 0.31
PCDH1-203ENST00000394536 MUTP22033 750 aa16.98■□□□□ 0.31
PCDH1-203ENST00000394536 GCLCP48506 637 aaPredicted RBP16.98■□□□□ 0.31
PCDH1-203ENST00000394536 LRRC36Q1X8D7 754 aa16.98■□□□□ 0.31
PCDH1-203ENST00000394536 FAM102AQ5T9C2 384 aaPredicted RBP16.98■□□□□ 0.31
PCDH1-203ENST00000394536 RNF149Q8NC42 400 aa16.98■□□□□ 0.31
PCDH1-203ENST00000394536 ZNF606Q8WXB4 792 aa16.98■□□□□ 0.31
PCDH1-203ENST00000394536 ADPGKQ9BRR6 497 aa16.98■□□□□ 0.31
PCDH1-203ENST00000394536 SENP1Q9P0U3 644 aa16.98■□□□□ 0.31
PCDH1-203ENST00000394536 TTLL3Q9Y4R7 772 aa16.98■□□□□ 0.31
PCDH1-203ENST00000394536 CACNA1SQ13698 1873 aa16.98■□□□□ 0.31
PCDH1-203ENST00000394536 C5orf60A6NFR6 353 aa16.98■□□□□ 0.31
PCDH1-203ENST00000394536 OPHN1O60890 802 aa16.98■□□□□ 0.31
PCDH1-203ENST00000394536 ENO1P06733 434 aaKnown RBP16.98■□□□□ 0.31
PCDH1-203ENST00000394536 OTUD4Q01804 1114 aaKnown RBP16.98■□□□□ 0.31
PCDH1-203ENST00000394536 PTK6Q13882 451 aa16.98■□□□□ 0.31
PCDH1-203ENST00000394536 DUOXA2Q1HG44 320 aa16.98■□□□□ 0.31
PCDH1-203ENST00000394536 KLHL38Q2WGJ6 581 aa16.98■□□□□ 0.31
PCDH1-203ENST00000394536 RSBN1LQ6PCB5 846 aaPredicted RBP16.98■□□□□ 0.31
PCDH1-203ENST00000394536 SPATA18Q8TC71 538 aa16.98■□□□□ 0.31
PCDH1-203ENST00000394536 PLEKHO2Q8TD55 490 aa16.98■□□□□ 0.31
PCDH1-203ENST00000394536 WRNIP1Q96S55 665 aa16.98■□□□□ 0.31
PCDH1-203ENST00000394536 NDC80O14777 642 aa16.97■□□□□ 0.31
PCDH1-203ENST00000394536 ADRA1DP25100 572 aa16.97■□□□□ 0.31
PCDH1-203ENST00000394536 YWHAEP62258 255 aaKnown RBP16.97■□□□□ 0.31
PCDH1-203ENST00000394536 CRYMQ14894 314 aa16.97■□□□□ 0.31
PCDH1-203ENST00000394536 MAPK6Q16659 721 aa16.97■□□□□ 0.31
PCDH1-203ENST00000394536 PIGWQ7Z7B1 504 aa16.97■□□□□ 0.31
PCDH1-203ENST00000394536 MAP7D3Q8IWC1 876 aa16.97■□□□□ 0.31
PCDH1-203ENST00000394536 ABRAQ8N0Z2 381 aa16.97■□□□□ 0.31
PCDH1-203ENST00000394536 FBXO36Q8NEA4 188 aa16.97■□□□□ 0.31
PCDH1-203ENST00000394536 TMC2Q8TDI7 906 aa16.97■□□□□ 0.31
PCDH1-203ENST00000394536 MTMR12Q9C0I1 747 aa16.97■□□□□ 0.31
PCDH1-203ENST00000394536 CYP26B1Q9NR63 512 aa16.97■□□□□ 0.31
PCDH1-203ENST00000394536 COL20A1Q9P218 1284 aa16.97■□□□□ 0.31
PCDH1-203ENST00000394536 NOCTQ9UK39 431 aaKnown RBP16.97■□□□□ 0.31
PCDH1-203ENST00000394536 KDM4FA0A1W2PPD8 638 aa16.97■□□□□ 0.31
PCDH1-203ENST00000394536 SERPINB6P35237 376 aa16.97■□□□□ 0.31
PCDH1-203ENST00000394536 EPHB1P54762 984 aa16.97■□□□□ 0.31
PCDH1-203ENST00000394536 ACTR2P61160 394 aa16.97■□□□□ 0.31
PCDH1-203ENST00000394536 POU5F1Q01860 360 aaKnown RBP16.97■□□□□ 0.31
PCDH1-203ENST00000394536 FASTKD3Q14CZ7 662 aaKnown RBP16.97■□□□□ 0.31
PCDH1-203ENST00000394536 XKR3Q5GH77 459 aa16.97■□□□□ 0.31
PCDH1-203ENST00000394536 ANKRD20A2Q5SQ80 823 aa16.97■□□□□ 0.31
PCDH1-203ENST00000394536 ANKRD20A1Q5TYW2 823 aa16.97■□□□□ 0.31
PCDH1-203ENST00000394536 MIEF2Q96C03 454 aa16.97■□□□□ 0.31
PCDH1-203ENST00000394536 BORCS6Q96GS4 357 aa16.97■□□□□ 0.31
PCDH1-203ENST00000394536 STK32BQ9NY57 414 aa16.97■□□□□ 0.31
PCDH1-203ENST00000394536 ROBO1Q9Y6N7 1651 aa16.97■□□□□ 0.31
PCDH1-203ENST00000394536 KIF1CO43896 1103 aaKnown RBP16.97■□□□□ 0.31
PCDH1-203ENST00000394536 KRT37O76014 449 aa16.97■□□□□ 0.31
PCDH1-203ENST00000394536 LRRC71Q8N4P6 559 aa16.97■□□□□ 0.31
PCDH1-203ENST00000394536 EXD1Q8NHP7 514 aa16.97■□□□□ 0.31
PCDH1-203ENST00000394536 HELQQ8TDG4 1101 aa16.97■□□□□ 0.31
PCDH1-203ENST00000394536 CCDC124Q96CT7 223 aaKnown RBP16.97■□□□□ 0.31
PCDH1-203ENST00000394536 TIPINQ9BVW5 301 aa16.97■□□□□ 0.31
PCDH1-203ENST00000394536 CPSF2Q9P2I0 782 aaKnown RBP16.97■□□□□ 0.31
PCDH1-203ENST00000394536 SCOCQ9UIL1 159 aa16.97■□□□□ 0.31
PCDH1-203ENST00000394536 A0A1W2PPM1 405 aa16.96■□□□□ 0.31
PCDH1-203ENST00000394536 WDR46O15213 610 aaKnown RBP16.96■□□□□ 0.31
PCDH1-203ENST00000394536 KRT7P08729 469 aa16.96■□□□□ 0.31
PCDH1-203ENST00000394536 GPC3P51654 580 aa16.96■□□□□ 0.31
PCDH1-203ENST00000394536 GEMIN4P57678 1058 aaKnown RBP16.96■□□□□ 0.31
PCDH1-203ENST00000394536 PTK7Q13308 1070 aa16.96■□□□□ 0.31
PCDH1-203ENST00000394536 ZNF568Q3ZCX4 644 aa16.96■□□□□ 0.31
PCDH1-203ENST00000394536 EP400NLQ6ZTU2 488 aa16.96■□□□□ 0.31
PCDH1-203ENST00000394536 ZC3H3Q8IXZ2 948 aaKnown RBP16.96■□□□□ 0.31
PCDH1-203ENST00000394536 MANSC1Q9H8J5 431 aa16.96■□□□□ 0.31
PCDH1-203ENST00000394536 MCM8Q9UJA3 840 aa16.96■□□□□ 0.31
PCDH1-203ENST00000394536 PSTPIP1O43586 416 aa16.96■□□□□ 0.31
PCDH1-203ENST00000394536 YY1P25490 414 aa16.96■□□□□ 0.31
PCDH1-203ENST00000394536 PGM1P36871 562 aa16.96■□□□□ 0.31
PCDH1-203ENST00000394536 PGM5Q15124 567 aa16.96■□□□□ 0.31
PCDH1-203ENST00000394536 MTFR1Q15390 333 aa16.96■□□□□ 0.31
PCDH1-203ENST00000394536 MAP4K3Q8IVH8 894 aa16.96■□□□□ 0.31
PCDH1-203ENST00000394536 ZDHHC14Q8IZN3 488 aa16.96■□□□□ 0.31
PCDH1-203ENST00000394536 ARMC2Q8NEN0 867 aa16.96■□□□□ 0.31
PCDH1-203ENST00000394536 TSC22D3Q99576 134 aa16.96■□□□□ 0.31
PCDH1-203ENST00000394536 KIAA1683Q9H0B3 1180 aa16.96■□□□□ 0.31
PCDH1-203ENST00000394536 ASTN2O75129 1339 aaPredicted RBP16.96■□□□□ 0.31
PCDH1-203ENST00000394536 M0QYV0 167 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms