RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 C3orf20Q8ND61 904 aa15.15■□□□□ 0.02
MKS1-203ENST00000393120 OSBPL8Q9BZF1 889 aa15.15■□□□□ 0.02
MKS1-203ENST00000393120 CYP3A43Q9HB55 503 aa15.15■□□□□ 0.02
MKS1-203ENST00000393120 CHST7Q9NS84 486 aa15.15■□□□□ 0.02
MKS1-203ENST00000393120 PTPN22Q9Y2R2 807 aa15.15■□□□□ 0.02
MKS1-203ENST00000393120 NEU2Q9Y3R4 380 aa15.15■□□□□ 0.02
MKS1-203ENST00000393120 H3BRB1 525 aa15.15■□□□□ 0.02
MKS1-203ENST00000393120 MEFVO15553 781 aaPredicted RBP15.15■□□□□ 0.02
MKS1-203ENST00000393120 NFICP08651 508 aa15.15■□□□□ 0.02
MKS1-203ENST00000393120 IVDP26440 423 aa15.15■□□□□ 0.02
MKS1-203ENST00000393120 POLR2BP30876 1174 aaKnown RBP15.15■□□□□ 0.02
MKS1-203ENST00000393120 PTPN7P35236 360 aa15.15■□□□□ 0.02
MKS1-203ENST00000393120 ADCYAP1R1P41586 468 aa15.15■□□□□ 0.02
MKS1-203ENST00000393120 GSCP56915 257 aaPredicted RBP15.15■□□□□ 0.02
MKS1-203ENST00000393120 COPS2P61201 443 aa15.15■□□□□ 0.02
MKS1-203ENST00000393120 RPL7AP62424 266 aaKnown RBP15.15■□□□□ 0.02
MKS1-203ENST00000393120 LACTBP83111 547 aaPredicted RBP15.15■□□□□ 0.02
MKS1-203ENST00000393120 CAV1Q03135 178 aa15.15■□□□□ 0.02
MKS1-203ENST00000393120 KRT17Q04695 432 aa15.15■□□□□ 0.02
MKS1-203ENST00000393120 IFFO1Q0D2I5 559 aa15.15■□□□□ 0.02
MKS1-203ENST00000393120 GRB14Q14449 540 aa15.15■□□□□ 0.02
MKS1-203ENST00000393120 DUSP28Q4G0W2 176 aa15.15■□□□□ 0.02
MKS1-203ENST00000393120 DENND2CQ68D51 928 aa15.15■□□□□ 0.02
MKS1-203ENST00000393120 HOOK3Q86VS8 718 aa15.15■□□□□ 0.02
MKS1-203ENST00000393120 CDR2LQ86X02 465 aaPredicted RBP15.15■□□□□ 0.02
MKS1-203ENST00000393120 NT5DC4Q86YG4 428 aa15.15■□□□□ 0.02
MKS1-203ENST00000393120 BRI3BPQ8WY22 251 aa15.15■□□□□ 0.02
MKS1-203ENST00000393120 RNF25Q96BH1 459 aaPredicted RBP15.15■□□□□ 0.02
MKS1-203ENST00000393120 RBM41Q96IZ5 413 aaKnown RBP15.15■□□□□ 0.02
MKS1-203ENST00000393120 TUT1Q9H6E5 874 aaKnown RBP15.15■□□□□ 0.02
MKS1-203ENST00000393120 AKT3Q9Y243 479 aa15.15■□□□□ 0.02
MKS1-203ENST00000393120 MCM3APO60318 1980 aa15.15■□□□□ 0.02
MKS1-203ENST00000393120 O00370 1275 aa15.14■□□□□ 0.01
MKS1-203ENST00000393120 TP73O15350 636 aa15.14■□□□□ 0.01
MKS1-203ENST00000393120 STAU1O95793 577 aaKnown RBP15.14■□□□□ 0.01
MKS1-203ENST00000393120 ARF4P18085 180 aaPredicted RBP15.14■□□□□ 0.01
MKS1-203ENST00000393120 MDH1P40925 334 aaKnown RBP15.14■□□□□ 0.01
MKS1-203ENST00000393120 ATP1A2P50993 1020 aa15.14■□□□□ 0.01
MKS1-203ENST00000393120 RAD23BP54727 409 aa15.14■□□□□ 0.01
MKS1-203ENST00000393120 ZNF252P-AS1Q0IIN9 211 aa15.14■□□□□ 0.01
MKS1-203ENST00000393120 SLC10A6Q3KNW5 377 aa15.14■□□□□ 0.01
MKS1-203ENST00000393120 WDR72Q3MJ13 1102 aa15.14■□□□□ 0.01
MKS1-203ENST00000393120 ZNF394Q53GI3 561 aa15.14■□□□□ 0.01
MKS1-203ENST00000393120 IQSEC1Q6DN90 963 aa15.14■□□□□ 0.01
MKS1-203ENST00000393120 JADE1Q6IE81 842 aa15.14■□□□□ 0.01
MKS1-203ENST00000393120 RHBDF2Q6PJF5 856 aa15.14■□□□□ 0.01
MKS1-203ENST00000393120 TRMT10CQ7L0Y3 403 aaKnown RBP15.14■□□□□ 0.01
MKS1-203ENST00000393120 ZNF410Q86VK4 478 aa15.14■□□□□ 0.01
MKS1-203ENST00000393120 TLCD1Q96CP7 247 aa15.14■□□□□ 0.01
MKS1-203ENST00000393120 PGM2Q96G03 612 aa15.14■□□□□ 0.01
MKS1-203ENST00000393120 NXF1Q9UBU9 619 aaKnown RBP15.14■□□□□ 0.01
MKS1-203ENST00000393120 A0A1B0GUA9 196 aa15.13■□□□□ 0.01
MKS1-203ENST00000393120 KRT19P08727 400 aa15.13■□□□□ 0.01
MKS1-203ENST00000393120 P4HA1P13674 534 aa15.13■□□□□ 0.01
MKS1-203ENST00000393120 NFX1Q12986 1120 aaKnown RBP15.13■□□□□ 0.01
MKS1-203ENST00000393120 KRT71Q3SY84 523 aa15.13■□□□□ 0.01
MKS1-203ENST00000393120 DRICH1Q6PGQ1 229 aaPredicted RBP15.13■□□□□ 0.01
MKS1-203ENST00000393120 DCUN1D2Q6PH85 259 aa15.13■□□□□ 0.01
MKS1-203ENST00000393120 GPR142Q7Z601 462 aa15.13■□□□□ 0.01
MKS1-203ENST00000393120 CCDC50Q8IVM0 306 aa15.13■□□□□ 0.01
MKS1-203ENST00000393120 SNF8Q96H20 258 aa15.13■□□□□ 0.01
MKS1-203ENST00000393120 WDR35Q9P2L0 1181 aa15.13■□□□□ 0.01
MKS1-203ENST00000393120 POLIQ9UNA4 740 aa15.13■□□□□ 0.01
MKS1-203ENST00000393120 USTQ9Y2C2 406 aa15.13■□□□□ 0.01
MKS1-203ENST00000393120 R3HDM2Q9Y2K5 976 aaKnown RBP15.13■□□□□ 0.01
MKS1-203ENST00000393120 C2CD2Q9Y426 696 aa15.13■□□□□ 0.01
MKS1-203ENST00000393120 SIGLEC16A6NMB1 481 aa15.13■□□□□ 0.01
MKS1-203ENST00000393120 ZNF286BP0CG31 522 aa15.13■□□□□ 0.01
MKS1-203ENST00000393120 SMPD1P17405 629 aa15.13■□□□□ 0.01
MKS1-203ENST00000393120 LSP1P33241 339 aa15.13■□□□□ 0.01
MKS1-203ENST00000393120 LMNB2Q03252 620 aa15.13■□□□□ 0.01
MKS1-203ENST00000393120 PDCLQ13371 301 aa15.13■□□□□ 0.01
MKS1-203ENST00000393120 SNX1Q13596 522 aa15.13■□□□□ 0.01
MKS1-203ENST00000393120 BYSLQ13895 437 aaKnown RBP15.13■□□□□ 0.01
MKS1-203ENST00000393120 SLC29A2Q14542 456 aa15.13■□□□□ 0.01
MKS1-203ENST00000393120 MARCH8Q5T0T0 291 aa15.13■□□□□ 0.01
MKS1-203ENST00000393120 DAB2IPQ5VWQ8 1189 aa15.13■□□□□ 0.01
MKS1-203ENST00000393120 DENND1BQ6P3S1 775 aa15.13■□□□□ 0.01
MKS1-203ENST00000393120 FOXR1Q6PIV2 292 aa15.13■□□□□ 0.01
MKS1-203ENST00000393120 SCARA5Q6ZMJ2 495 aa15.13■□□□□ 0.01
MKS1-203ENST00000393120 DPP9Q86TI2 863 aa15.13■□□□□ 0.01
MKS1-203ENST00000393120 TTC39CQ8N584 583 aa15.13■□□□□ 0.01
MKS1-203ENST00000393120 BBOF1Q8ND07 529 aa15.13■□□□□ 0.01
MKS1-203ENST00000393120 FNIP1Q8TF40 1166 aa15.13■□□□□ 0.01
MKS1-203ENST00000393120 ATG4AQ8WYN0 398 aa15.13■□□□□ 0.01
MKS1-203ENST00000393120 MAML3Q96JK9 1138 aa15.13■□□□□ 0.01
MKS1-203ENST00000393120 MCEEQ96PE7 176 aa15.13■□□□□ 0.01
MKS1-203ENST00000393120 CENPHQ9H3R5 247 aa15.13■□□□□ 0.01
MKS1-203ENST00000393120 SEMA4AQ9H3S1 761 aa15.13■□□□□ 0.01
MKS1-203ENST00000393120 ABHD16BQ9H3Z7 469 aa15.13■□□□□ 0.01
MKS1-203ENST00000393120 DDX56Q9NY93 547 aaKnown RBP15.13■□□□□ 0.01
MKS1-203ENST00000393120 SLC12A6Q9UHW9 1150 aa15.13■□□□□ 0.01
MKS1-203ENST00000393120 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.12■□□□□ 0.01
MKS1-203ENST00000393120 TSPAN1O60635 241 aa15.12■□□□□ 0.01
MKS1-203ENST00000393120 CILPO75339 1184 aa15.12■□□□□ 0.01
MKS1-203ENST00000393120 GJB6O95452 261 aa15.12■□□□□ 0.01
MKS1-203ENST00000393120 ITGB3P05106 788 aa15.12■□□□□ 0.01
MKS1-203ENST00000393120 CDC42EP1Q00587 391 aa15.12■□□□□ 0.01
MKS1-203ENST00000393120 OGDHQ02218 1023 aa15.12■□□□□ 0.01
MKS1-203ENST00000393120 IRF5Q13568 498 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms