RNA–Protein interactions for RNA: ENST00000378518.5

RER1-204, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-204ENST00000378518 ATXN2LQ8WWM7 1075 aaKnown RBP21.47■■□□□ 1.03
RER1-204ENST00000378518 CNOT6LQ96LI5 555 aaKnown RBP21.47■■□□□ 1.03
RER1-204ENST00000378518 MED15Q96RN5 788 aa21.47■■□□□ 1.03
RER1-204ENST00000378518 XYLT2Q9H1B5 865 aa21.47■■□□□ 1.03
RER1-204ENST00000378518 MAGEC2Q9UBF1 373 aaPredicted RBP21.47■■□□□ 1.03
RER1-204ENST00000378518 FBXW11Q9UKB1 542 aa21.47■■□□□ 1.03
RER1-204ENST00000378518 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.47■■□□□ 1.03
RER1-204ENST00000378518 EYSQ5T1H1 3165 aa21.46■■□□□ 1.03
RER1-204ENST00000378518 WDR27A2RRH5 827 aa21.46■■□□□ 1.03
RER1-204ENST00000378518 ELF1P32519 619 aa21.46■■□□□ 1.03
RER1-204ENST00000378518 CETN1Q12798 172 aa21.46■■□□□ 1.03
RER1-204ENST00000378518 SOWAHAQ2M3V2 549 aa21.46■■□□□ 1.03
RER1-204ENST00000378518 PUS10Q3MIT2 529 aaKnown RBP21.46■■□□□ 1.03
RER1-204ENST00000378518 LILRA6Q6PI73 481 aa21.46■■□□□ 1.03
RER1-204ENST00000378518 TRIM59Q8IWR1 403 aa21.46■■□□□ 1.03
RER1-204ENST00000378518 ENOX1Q8TC92 643 aaKnown RBP21.46■■□□□ 1.03
RER1-204ENST00000378518 TAS1R2Q8TE23 839 aa21.46■■□□□ 1.03
RER1-204ENST00000378518 MSLNLQ96KJ4 702 aa21.46■■□□□ 1.03
RER1-204ENST00000378518 NAT10Q9H0A0 1025 aaKnown RBP21.46■■□□□ 1.03
RER1-204ENST00000378518 DDX43Q9NXZ2 648 aaKnown RBP21.46■■□□□ 1.03
RER1-204ENST00000378518 FAM50BQ9Y247 325 aa21.46■■□□□ 1.03
RER1-204ENST00000378518 ASS1P00966 412 aaKnown RBP21.45■■□□□ 1.02
RER1-204ENST00000378518 FAM163BP0C2L3 166 aa21.45■■□□□ 1.02
RER1-204ENST00000378518 SPATA31D3P0C874 917 aa21.45■■□□□ 1.02
RER1-204ENST00000378518 FMO5P49326 533 aa21.45■■□□□ 1.02
RER1-204ENST00000378518 MRPS5P82675 430 aaKnown RBP21.45■■□□□ 1.02
RER1-204ENST00000378518 TSPY1Q01534 308 aa21.45■■□□□ 1.02
RER1-204ENST00000378518 TFF2Q03403 129 aa21.45■■□□□ 1.02
RER1-204ENST00000378518 CLUL1Q15846 466 aa21.45■■□□□ 1.02
RER1-204ENST00000378518 CES5AQ6NT32 575 aa21.45■■□□□ 1.02
RER1-204ENST00000378518 SPATA31D4Q6ZUB0 917 aa21.45■■□□□ 1.02
RER1-204ENST00000378518 CCDC149Q6ZUS6 474 aa21.45■■□□□ 1.02
RER1-204ENST00000378518 DCP1BQ8IZD4 617 aaKnown RBP21.45■■□□□ 1.02
RER1-204ENST00000378518 DNAJC25Q9H1X3 360 aa21.45■■□□□ 1.02
RER1-204ENST00000378518 SNX25Q9H3E2 840 aa21.45■■□□□ 1.02
RER1-204ENST00000378518 RAB20Q9NX57 234 aa21.45■■□□□ 1.02
RER1-204ENST00000378518 MAFFQ9ULX9 164 aa21.45■■□□□ 1.02
RER1-204ENST00000378518 BRWD1Q9NSI6 2320 aa21.44■■□□□ 1.02
RER1-204ENST00000378518 COL6A3P12111 3177 aa21.44■■□□□ 1.02
RER1-204ENST00000378518 TACC1O75410 805 aa21.44■■□□□ 1.02
RER1-204ENST00000378518 ABLIM3O94929 683 aa21.44■■□□□ 1.02
RER1-204ENST00000378518 AFPP02771 609 aaKnown RBP21.44■■□□□ 1.02
RER1-204ENST00000378518 ATF2P15336 505 aa21.44■■□□□ 1.02
RER1-204ENST00000378518 WARSP23381 471 aaKnown RBP21.44■■□□□ 1.02
RER1-204ENST00000378518 PCSK1P29120 753 aa21.44■■□□□ 1.02
RER1-204ENST00000378518 MTIF2P46199 727 aaKnown RBP21.44■■□□□ 1.02
RER1-204ENST00000378518 NOP14P78316 857 aaKnown RBP21.44■■□□□ 1.02
RER1-204ENST00000378518 ITIH3Q06033 890 aa21.44■■□□□ 1.02
RER1-204ENST00000378518 GPR17Q13304 367 aa21.44■■□□□ 1.02
RER1-204ENST00000378518 SMAD4Q13485 552 aaKnown RBP21.44■■□□□ 1.02
RER1-204ENST00000378518 CBWD6Q4V339 395 aa21.44■■□□□ 1.02
RER1-204ENST00000378518 WDR44Q5JSH3 913 aa21.44■■□□□ 1.02
RER1-204ENST00000378518 CBWD3Q5JTY5 395 aa21.44■■□□□ 1.02
RER1-204ENST00000378518 CBWD5Q5RIA9 395 aa21.44■■□□□ 1.02
RER1-204ENST00000378518 C11orf57Q6ZUT1 292 aaPredicted RBP21.44■■□□□ 1.02
RER1-204ENST00000378518 LIMS2Q7Z4I7 341 aa21.44■■□□□ 1.02
RER1-204ENST00000378518 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.44■■□□□ 1.022e-6■■■■□ 20.2
RER1-204ENST00000378518 ACBD6Q9BR61 282 aa21.44■■□□□ 1.02
RER1-204ENST00000378518 AFF4Q9UHB7 1163 aaKnown RBP21.44■■□□□ 1.02
RER1-204ENST00000378518 POLIQ9UNA4 740 aa21.44■■□□□ 1.02
RER1-204ENST00000378518 NFE2L3Q9Y4A8 694 aa21.44■■□□□ 1.02
RER1-204ENST00000378518 SYCE3A1L190 88 aa21.43■■□□□ 1.02
RER1-204ENST00000378518 GABRDO14764 452 aa21.43■■□□□ 1.02
RER1-204ENST00000378518 P4HA2O15460 535 aa21.43■■□□□ 1.02
RER1-204ENST00000378518 C8AP07357 584 aa21.43■■□□□ 1.02
RER1-204ENST00000378518 OR4Q2P0C623 313 aa21.43■■□□□ 1.02
RER1-204ENST00000378518 KCNH2Q12809 1159 aa21.43■■□□□ 1.02
RER1-204ENST00000378518 SMARCB1Q12824 385 aa21.43■■□□□ 1.02
RER1-204ENST00000378518 NFKBIBQ15653 356 aa21.43■■□□□ 1.02
RER1-204ENST00000378518 UVSSAQ2YD98 709 aa21.43■■□□□ 1.02
RER1-204ENST00000378518 PPM1LQ5SGD2 360 aa21.43■■□□□ 1.02
RER1-204ENST00000378518 RARS2Q5T160 578 aaKnown RBP21.43■■□□□ 1.02
RER1-204ENST00000378518 SYCE2Q6PIF2 218 aa21.43■■□□□ 1.02
RER1-204ENST00000378518 SCARA5Q6ZMJ2 495 aa21.43■■□□□ 1.02
RER1-204ENST00000378518 RTL10Q7L3V2 364 aa21.43■■□□□ 1.02
RER1-204ENST00000378518 SMRP1Q8NCR6 262 aa21.43■■□□□ 1.02
RER1-204ENST00000378518 OR6B3Q8NGW1 331 aa21.43■■□□□ 1.02
RER1-204ENST00000378518 OR10T2Q8NGX3 314 aa21.43■■□□□ 1.02
RER1-204ENST00000378518 PI4K2AQ9BTU6 479 aa21.43■■□□□ 1.02
RER1-204ENST00000378518 ZCWPW1Q9H0M4 648 aa21.43■■□□□ 1.02
RER1-204ENST00000378518 ZDHHC7Q9NXF8 308 aa21.43■■□□□ 1.02
RER1-204ENST00000378518 COQ4Q9Y3A0 265 aa21.43■■□□□ 1.02
RER1-204ENST00000378518 C2orf16Q68DN1 1984 aa21.43■■□□□ 1.02
RER1-204ENST00000378518 PRRG1O14668 218 aa21.42■■□□□ 1.02
RER1-204ENST00000378518 PMM2O15305 246 aa21.42■■□□□ 1.02
RER1-204ENST00000378518 ZMYND10O75800 440 aa21.42■■□□□ 1.02
RER1-204ENST00000378518 MYL5Q02045 173 aa21.42■■□□□ 1.02
RER1-204ENST00000378518 ADCY1Q08828 1119 aa21.42■■□□□ 1.02
RER1-204ENST00000378518 ANO6Q4KMQ2 910 aa21.42■■□□□ 1.02
RER1-204ENST00000378518 SLC39A12Q504Y0 691 aa21.42■■□□□ 1.02
RER1-204ENST00000378518 SPOPLQ6IQ16 392 aa21.42■■□□□ 1.02
RER1-204ENST00000378518 PTCRAQ6ISU1 281 aaPredicted RBP21.42■■□□□ 1.02
RER1-204ENST00000378518 RNF19BQ6ZMZ0 732 aa21.42■■□□□ 1.02
RER1-204ENST00000378518 OSTM1Q86WC4 334 aa21.42■■□□□ 1.02
RER1-204ENST00000378518 CMASQ8NFW8 434 aaPredicted RBP21.42■■□□□ 1.02
RER1-204ENST00000378518 SLC7A14Q8TBB6 771 aa21.42■■□□□ 1.02
RER1-204ENST00000378518 KBTBD7Q8WVZ9 684 aa21.42■■□□□ 1.02
RER1-204ENST00000378518 TMEM209Q96SK2 561 aa21.42■■□□□ 1.02
RER1-204ENST00000378518 RTP3Q9BQQ7 232 aa21.42■■□□□ 1.02
RER1-204ENST00000378518 APOL5Q9BWW9 433 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms