RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 RIPK1Q13546 671 aa19.22■□□□□ 0.67
TDP2-202ENST00000378198 PIGHQ14442 188 aaPredicted RBP19.22■□□□□ 0.67
TDP2-202ENST00000378198 DNAJC24Q6P3W2 148 aa19.22■□□□□ 0.67
TDP2-202ENST00000378198 ZPBP2Q6X784 338 aa19.22■□□□□ 0.67
TDP2-202ENST00000378198 SPOCD1Q6ZMY3 1216 aa19.22■□□□□ 0.67
TDP2-202ENST00000378198 SAMD7Q7Z3H4 446 aa19.22■□□□□ 0.67
TDP2-202ENST00000378198 TDRPQ86YL5 185 aa19.22■□□□□ 0.67
TDP2-202ENST00000378198 TMEM35BQ8NCS4 154 aa19.22■□□□□ 0.67
TDP2-202ENST00000378198 DNERQ8NFT8 737 aa19.22■□□□□ 0.67
TDP2-202ENST00000378198 ZNF526Q8TF50 670 aaPredicted RBP19.22■□□□□ 0.67
TDP2-202ENST00000378198 WRNIP1Q96S55 665 aa19.22■□□□□ 0.67
TDP2-202ENST00000378198 NRBP2Q9NSY0 501 aa19.22■□□□□ 0.67
TDP2-202ENST00000378198 KLHL11Q9NVR0 708 aa19.22■□□□□ 0.67
TDP2-202ENST00000378198 DDX56Q9NY93 547 aaKnown RBP19.22■□□□□ 0.67
TDP2-202ENST00000378198 PIM2Q9P1W9 311 aa19.22■□□□□ 0.67
TDP2-202ENST00000378198 EXOC1LA0A1B0GW35 172 aa19.21■□□□□ 0.67
TDP2-202ENST00000378198 ADCY3O60266 1144 aa19.21■□□□□ 0.67
TDP2-202ENST00000378198 ARSEP51690 589 aa19.21■□□□□ 0.67
TDP2-202ENST00000378198 TMED2Q15363 201 aa19.21■□□□□ 0.67
TDP2-202ENST00000378198 CYP4F22Q6NT55 531 aa19.21■□□□□ 0.67
TDP2-202ENST00000378198 RPAINQ86UA6 219 aa19.21■□□□□ 0.67
TDP2-202ENST00000378198 MICALL2Q8IY33 904 aa19.21■□□□□ 0.67
TDP2-202ENST00000378198 FHDC1Q9C0D6 1143 aaPredicted RBP19.21■□□□□ 0.67
TDP2-202ENST00000378198 HOXC10Q9NYD6 342 aa19.21■□□□□ 0.67
TDP2-202ENST00000378198 AGAP1Q9UPQ3 857 aa19.21■□□□□ 0.67
TDP2-202ENST00000378198 FAM47DPA6NHR8 397 aa19.21■□□□□ 0.67
TDP2-202ENST00000378198 CST3P01034 146 aaPredicted RBP19.21■□□□□ 0.67
TDP2-202ENST00000378198 RXRBP28702 533 aa19.21■□□□□ 0.67
TDP2-202ENST00000378198 ZNF252P-AS1Q0IIN9 211 aa19.21■□□□□ 0.67
TDP2-202ENST00000378198 BNIP1Q12981 228 aa19.21■□□□□ 0.67
TDP2-202ENST00000378198 CAPSQ13938 189 aa19.21■□□□□ 0.67
TDP2-202ENST00000378198 MORF4L2Q15014 288 aa19.21■□□□□ 0.67
TDP2-202ENST00000378198 SMYD5Q6GMV2 418 aa19.21■□□□□ 0.67
TDP2-202ENST00000378198 DCUN1D2Q6PH85 259 aa19.21■□□□□ 0.67
TDP2-202ENST00000378198 TBC1D1Q86TI0 1168 aaPredicted RBP19.21■□□□□ 0.67
TDP2-202ENST00000378198 MCEEQ96PE7 176 aa19.21■□□□□ 0.67
TDP2-202ENST00000378198 RXFP1Q9HBX9 757 aa19.21■□□□□ 0.67
TDP2-202ENST00000378198 IVNS1ABPQ9Y6Y0 642 aa19.21■□□□□ 0.67
TDP2-202ENST00000378198 HARSP12081 509 aaKnown RBP19.2■□□□□ 0.66
TDP2-202ENST00000378198 TCF4P15884 667 aa19.2■□□□□ 0.66
TDP2-202ENST00000378198 NCALDP61601 193 aa19.2■□□□□ 0.66
TDP2-202ENST00000378198 ACVR2BQ13705 512 aa19.2■□□□□ 0.66
TDP2-202ENST00000378198 MTFR1Q15390 333 aa19.2■□□□□ 0.66
TDP2-202ENST00000378198 TARBP2Q15633 366 aaKnown RBP19.2■□□□□ 0.66
TDP2-202ENST00000378198 SEZ6Q53EL9 994 aa19.2■□□□□ 0.66
TDP2-202ENST00000378198 TFDP3Q5H9I0 405 aa19.2■□□□□ 0.66
TDP2-202ENST00000378198 TMEM63BQ5T3F8 832 aa19.2■□□□□ 0.66
TDP2-202ENST00000378198 RNF43Q68DV7 783 aa19.2■□□□□ 0.66
TDP2-202ENST00000378198 TRABD2AQ86V40 505 aa19.2■□□□□ 0.66
TDP2-202ENST00000378198 GLIS1Q8NBF1 620 aa19.2■□□□□ 0.66
TDP2-202ENST00000378198 ECT2Q9H8V3 914 aa19.2■□□□□ 0.66
TDP2-202ENST00000378198 PPCSQ9HAB8 311 aa19.2■□□□□ 0.66
TDP2-202ENST00000378198 NOD2Q9HC29 1040 aa19.2■□□□□ 0.66
TDP2-202ENST00000378198 hCG_1818297A0A087WSY0 165 aa19.2■□□□□ 0.66
TDP2-202ENST00000378198 F8VP50 259 aa19.2■□□□□ 0.66
TDP2-202ENST00000378198 ITGAVP06756 1048 aa19.2■□□□□ 0.66
TDP2-202ENST00000378198 NQO1P15559 274 aaKnown RBP19.2■□□□□ 0.66
TDP2-202ENST00000378198 SLC18A1P54219 525 aa19.2■□□□□ 0.66
TDP2-202ENST00000378198 VCPP55072 806 aaKnown RBP19.2■□□□□ 0.66
TDP2-202ENST00000378198 GPS1Q13098 491 aa19.2■□□□□ 0.66
TDP2-202ENST00000378198 SURF1Q15526 300 aa19.2■□□□□ 0.66
TDP2-202ENST00000378198 CCDC142Q17RM4 750 aa19.2■□□□□ 0.66
TDP2-202ENST00000378198 SGSM1Q2NKQ1 1148 aa19.2■□□□□ 0.66
TDP2-202ENST00000378198 PPP1R15BQ5SWA1 713 aa19.2■□□□□ 0.66
TDP2-202ENST00000378198 NIPA2Q8N8Q9 360 aa19.2■□□□□ 0.66
TDP2-202ENST00000378198 NKD2Q969F2 451 aaPredicted RBP19.2■□□□□ 0.66
TDP2-202ENST00000378198 NCAPGQ9BPX3 1015 aa19.2■□□□□ 0.66
TDP2-202ENST00000378198 KLHL14Q9P2G3 628 aa19.2■□□□□ 0.66
TDP2-202ENST00000378198 PECAM1P16284 738 aaPredicted RBP19.19■□□□□ 0.66
TDP2-202ENST00000378198 TAC1P20366 129 aa19.19■□□□□ 0.66
TDP2-202ENST00000378198 EIF4BP23588 611 aaKnown RBP19.19■□□□□ 0.66
TDP2-202ENST00000378198 GCAP28676 217 aa19.19■□□□□ 0.66
TDP2-202ENST00000378198 CDH5P33151 784 aaPredicted RBP19.19■□□□□ 0.66
TDP2-202ENST00000378198 MAP2K2P36507 400 aa19.19■□□□□ 0.66
TDP2-202ENST00000378198 EFNA5P52803 228 aa19.19■□□□□ 0.66
TDP2-202ENST00000378198 OASLQ15646 514 aaKnown RBP19.19■□□□□ 0.66
TDP2-202ENST00000378198 ZKSCAN8Q15776 578 aaPredicted RBP19.19■□□□□ 0.66
TDP2-202ENST00000378198 SEPT14Q6ZU15 432 aa19.19■□□□□ 0.66
TDP2-202ENST00000378198 CEP57Q86XR8 500 aa19.19■□□□□ 0.66
TDP2-202ENST00000378198 CHST13Q8NET6 341 aa19.19■□□□□ 0.66
TDP2-202ENST00000378198 TCP11Q8WWU5 503 aa19.19■□□□□ 0.66
TDP2-202ENST00000378198 SENP1Q9P0U3 644 aa19.19■□□□□ 0.66
TDP2-202ENST00000378198 BAIAP2L1Q9UHR4 511 aa19.19■□□□□ 0.66
TDP2-202ENST00000378198 GGT7Q9UJ14 662 aa19.19■□□□□ 0.66
TDP2-202ENST00000378198 PCDHGC3Q9UN70 934 aa19.19■□□□□ 0.66
TDP2-202ENST00000378198 SPDYE16A6NNV3 312 aaPredicted RBP19.18■□□□□ 0.66
TDP2-202ENST00000378198 ALOX15BO15296 676 aa19.18■□□□□ 0.66
TDP2-202ENST00000378198 PRPF4O43172 522 aaKnown RBP eCLIP19.18■□□□□ 0.661e-16■■■□□ 16.4
TDP2-202ENST00000378198 TOM1L1O75674 476 aa19.18■□□□□ 0.66
TDP2-202ENST00000378198 ZSCAN5DPP0CG00 497 aa19.18■□□□□ 0.66
TDP2-202ENST00000378198 EZRP15311 586 aaKnown RBP19.18■□□□□ 0.66
TDP2-202ENST00000378198 BRD2P25440 801 aaKnown RBP19.18■□□□□ 0.66
TDP2-202ENST00000378198 TNFSF9P41273 254 aa19.18■□□□□ 0.66
TDP2-202ENST00000378198 GMPSP49915 693 aaPredicted RBP19.18■□□□□ 0.66
TDP2-202ENST00000378198 OGDHQ02218 1023 aa19.18■□□□□ 0.66
TDP2-202ENST00000378198 ZNF268Q14587 947 aaPredicted RBP19.18■□□□□ 0.66
TDP2-202ENST00000378198 FAM160B1Q5W0V3 765 aa19.18■□□□□ 0.66
TDP2-202ENST00000378198 ERICH1Q86X53 443 aa19.18■□□□□ 0.66
TDP2-202ENST00000378198 MRPL4Q9BYD3 311 aaKnown RBP19.18■□□□□ 0.66
TDP2-202ENST00000378198 PITPNM3Q9BZ71 974 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms