RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 TRADDQ15628 312 aa13.39□□□□□ -0.27
CLCN6-206ENST00000376496 MAP3K21Q5TCX8 1036 aa13.39□□□□□ -0.27
CLCN6-206ENST00000376496 C9orf57Q5W0N0 161 aa13.39□□□□□ -0.27
CLCN6-206ENST00000376496 C11orf63Q6NUN7 778 aa13.39□□□□□ -0.27
CLCN6-206ENST00000376496 TMCO3Q6UWJ1 677 aa13.39□□□□□ -0.27
CLCN6-206ENST00000376496 SH3TC2Q8TF17 1288 aa13.39□□□□□ -0.27
CLCN6-206ENST00000376496 DDX47Q9H0S4 455 aaKnown RBP13.39□□□□□ -0.27
CLCN6-206ENST00000376496 TRPV6Q9H1D0 765 aa13.39□□□□□ -0.27
CLCN6-206ENST00000376496 FAM49BQ9NUQ9 324 aa13.39□□□□□ -0.27
CLCN6-206ENST00000376496 CNTN3Q9P232 1028 aa13.39□□□□□ -0.27
CLCN6-206ENST00000376496 NOD1Q9Y239 953 aa13.39□□□□□ -0.27
CLCN6-206ENST00000376496 CYP3A5P20815 502 aa13.38□□□□□ -0.27
CLCN6-206ENST00000376496 PTPN11Q06124 597 aaPredicted RBP13.38□□□□□ -0.27
CLCN6-206ENST00000376496 CCDC142Q17RM4 750 aa13.38□□□□□ -0.27
CLCN6-206ENST00000376496 ZNF572Q7Z3I7 529 aaPredicted RBP13.38□□□□□ -0.27
CLCN6-206ENST00000376496 ACOT1Q86TX2 421 aa13.38□□□□□ -0.27
CLCN6-206ENST00000376496 MMGT1Q8N4V1 131 aa13.38□□□□□ -0.27
CLCN6-206ENST00000376496 TMEM176AQ96HP8 235 aa13.38□□□□□ -0.27
CLCN6-206ENST00000376496 PBKQ96KB5 322 aa13.38□□□□□ -0.27
CLCN6-206ENST00000376496 RNPC3Q96LT9 517 aaKnown RBP13.38□□□□□ -0.27
CLCN6-206ENST00000376496 PLEKHA5Q9HAU0 1116 aa13.38□□□□□ -0.27
CLCN6-206ENST00000376496 ARGLU1Q9NWB6 273 aaPredicted RBP13.38□□□□□ -0.27
CLCN6-206ENST00000376496 UVRAGQ9P2Y5 699 aa13.38□□□□□ -0.27
CLCN6-206ENST00000376496 PTGESO14684 152 aa13.38□□□□□ -0.27
CLCN6-206ENST00000376496 MGEA5O60502 916 aa13.38□□□□□ -0.27
CLCN6-206ENST00000376496 MTA2O94776 668 aa13.38□□□□□ -0.27
CLCN6-206ENST00000376496 TCF4P15884 667 aa13.38□□□□□ -0.27
CLCN6-206ENST00000376496 MMP8P22894 467 aa13.38□□□□□ -0.27
CLCN6-206ENST00000376496 AXLP30530 894 aa13.38□□□□□ -0.27
CLCN6-206ENST00000376496 ATICP31939 592 aa13.38□□□□□ -0.27
CLCN6-206ENST00000376496 MLH1P40692 756 aa13.38□□□□□ -0.27
CLCN6-206ENST00000376496 TRIM72Q6ZMU5 477 aa13.38□□□□□ -0.27
CLCN6-206ENST00000376496 APBB1IPQ7Z5R6 666 aaPredicted RBP13.38□□□□□ -0.27
CLCN6-206ENST00000376496 PHF13Q86YI8 300 aaPredicted RBP13.38□□□□□ -0.27
CLCN6-206ENST00000376496 BEST2Q8NFU1 509 aa13.38□□□□□ -0.27
CLCN6-206ENST00000376496 RPGRIP1Q96KN7 1286 aa13.38□□□□□ -0.27
CLCN6-206ENST00000376496 SELENOOQ9BVL4 669 aa13.38□□□□□ -0.27
CLCN6-206ENST00000376496 DPEP3Q9H4B8 488 aa13.38□□□□□ -0.27
CLCN6-206ENST00000376496 TCRBV7S2A1N4TA0A589 114 aa13.37□□□□□ -0.27
CLCN6-206ENST00000376496 PGRMC1O00264 195 aaKnown RBP13.37□□□□□ -0.27
CLCN6-206ENST00000376496 KRIT1O00522 736 aa13.37□□□□□ -0.27
CLCN6-206ENST00000376496 TLR3O15455 904 aaKnown RBP13.37□□□□□ -0.27
CLCN6-206ENST00000376496 PDGFRBP09619 1106 aa13.37□□□□□ -0.27
CLCN6-206ENST00000376496 PYGMP11217 842 aa13.37□□□□□ -0.27
CLCN6-206ENST00000376496 HOXD10P28358 340 aa13.37□□□□□ -0.27
CLCN6-206ENST00000376496 SSR1P43307 286 aaKnown RBP13.37□□□□□ -0.27
CLCN6-206ENST00000376496 MYO1EQ12965 1108 aa13.37□□□□□ -0.27
CLCN6-206ENST00000376496 PTPN20Q4JDL3 420 aa13.37□□□□□ -0.27
CLCN6-206ENST00000376496 C8orf74Q6P047 294 aa13.37□□□□□ -0.27
CLCN6-206ENST00000376496 RSPH3Q86UC2 560 aa13.37□□□□□ -0.27
CLCN6-206ENST00000376496 CD302Q8IX05 232 aa13.37□□□□□ -0.27
CLCN6-206ENST00000376496 TMEM35BQ8NCS4 154 aa13.37□□□□□ -0.27
CLCN6-206ENST00000376496 GAD1Q99259 594 aa13.37□□□□□ -0.27
CLCN6-206ENST00000376496 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.37□□□□□ -0.272e-8■■□□□ 13.2
CLCN6-206ENST00000376496 ERVK-5Q9HDB9 667 aa13.37□□□□□ -0.27
CLCN6-206ENST00000376496 KLHL11Q9NVR0 708 aa13.37□□□□□ -0.27
CLCN6-206ENST00000376496 RAB21Q9UL25 225 aa13.37□□□□□ -0.27
CLCN6-206ENST00000376496 M0QYV0 167 aa13.37□□□□□ -0.27
CLCN6-206ENST00000376496 SASH3O75995 380 aa13.37□□□□□ -0.27
CLCN6-206ENST00000376496 MICAL2O94851 1124 aa13.37□□□□□ -0.27
CLCN6-206ENST00000376496 YY1P25490 414 aa13.37□□□□□ -0.27
CLCN6-206ENST00000376496 PEX5P50542 639 aa13.37□□□□□ -0.27
CLCN6-206ENST00000376496 MGAT3Q09327 533 aa13.37□□□□□ -0.27
CLCN6-206ENST00000376496 TCEAL1Q15170 157 aa13.37□□□□□ -0.27
CLCN6-206ENST00000376496 LONRF2Q1L5Z9 754 aa13.37□□□□□ -0.27
CLCN6-206ENST00000376496 LIN9Q5TKA1 542 aa13.37□□□□□ -0.27
CLCN6-206ENST00000376496 ERICH1Q86X53 443 aa13.37□□□□□ -0.27
CLCN6-206ENST00000376496 CD101Q93033 1021 aa13.37□□□□□ -0.27
CLCN6-206ENST00000376496 MCEEQ96PE7 176 aa13.37□□□□□ -0.27
CLCN6-206ENST00000376496 CPXM1Q96SM3 734 aa13.37□□□□□ -0.27
CLCN6-206ENST00000376496 MIOSQ9NXC5 875 aa13.37□□□□□ -0.27
CLCN6-206ENST00000376496 PADI3Q9ULW8 664 aa13.37□□□□□ -0.27
CLCN6-206ENST00000376496 PTCH2Q9Y6C5 1203 aa13.37□□□□□ -0.27
CLCN6-206ENST00000376496 MYO1FO00160 1098 aa13.36□□□□□ -0.27
CLCN6-206ENST00000376496 TULP2O00295 520 aa13.36□□□□□ -0.27
CLCN6-206ENST00000376496 GLI1P08151 1106 aa13.36□□□□□ -0.27
CLCN6-206ENST00000376496 YWHAEP62258 255 aaKnown RBP13.36□□□□□ -0.27
CLCN6-206ENST00000376496 POU5F1Q01860 360 aaKnown RBP13.36□□□□□ -0.27
CLCN6-206ENST00000376496 OGDHQ02218 1023 aa13.36□□□□□ -0.27
CLCN6-206ENST00000376496 SOWAHAQ2M3V2 549 aa13.36□□□□□ -0.27
CLCN6-206ENST00000376496 RNF180Q86T96 592 aa13.36□□□□□ -0.27
CLCN6-206ENST00000376496 OR6B3Q8NGW1 331 aa13.36□□□□□ -0.27
CLCN6-206ENST00000376496 ACTRT1Q8TDG2 376 aa13.36□□□□□ -0.27
CLCN6-206ENST00000376496 VRTNQ9H8Y1 702 aa13.36□□□□□ -0.27
CLCN6-206ENST00000376496 AVENQ9NQS1 362 aaPredicted RBP13.36□□□□□ -0.27
CLCN6-206ENST00000376496 FAM105AQ9NUU6 356 aa13.36□□□□□ -0.27
CLCN6-206ENST00000376496 BARX2Q9UMQ3 279 aaPredicted RBP13.36□□□□□ -0.27
CLCN6-206ENST00000376496 UBQLN1Q9UMX0 589 aaKnown RBP13.36□□□□□ -0.27
CLCN6-206ENST00000376496 RAD51CO43502 376 aa13.36□□□□□ -0.27
CLCN6-206ENST00000376496 FGFR1P11362 822 aa13.36□□□□□ -0.27
CLCN6-206ENST00000376496 P4HA1P13674 534 aa13.36□□□□□ -0.27
CLCN6-206ENST00000376496 LMO2P25791 158 aa13.36□□□□□ -0.27
CLCN6-206ENST00000376496 TAS2R40P59535 323 aa13.36□□□□□ -0.27
CLCN6-206ENST00000376496 LHX8Q68G74 356 aa13.36□□□□□ -0.27
CLCN6-206ENST00000376496 ZDHHC14Q8IZN3 488 aa13.36□□□□□ -0.27
CLCN6-206ENST00000376496 ACSF2Q96CM8 615 aaPredicted RBP13.36□□□□□ -0.27
CLCN6-206ENST00000376496 ST7Q9NRC1 585 aa13.36□□□□□ -0.27
CLCN6-206ENST00000376496 RALGAPA2Q2PPJ7 1873 aa13.36□□□□□ -0.27
CLCN6-206ENST00000376496 RGS7P49802 495 aa13.36□□□□□ -0.27
CLCN6-206ENST00000376496 PCBP1Q15365 356 aaKnown RBP eCLIP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms