RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 KIF2BQ8N4N8 673 aa15.37■□□□□ 0.05
MSH5-201ENST00000375703 REPS2Q8NFH8 660 aa15.37■□□□□ 0.05
MSH5-201ENST00000375703 IMPG2Q9BZV3 1241 aa15.37■□□□□ 0.05
MSH5-201ENST00000375703 UBN1Q9NPG3 1134 aa15.37■□□□□ 0.05
MSH5-201ENST00000375703 ZNF302Q9NR11 478 aa15.37■□□□□ 0.05
MSH5-201ENST00000375703 CYP39A1Q9NYL5 469 aa15.37■□□□□ 0.05
MSH5-201ENST00000375703 CST3P01034 146 aaPredicted RBP15.37■□□□□ 0.05
MSH5-201ENST00000375703 CALB1P05937 261 aa15.37■□□□□ 0.05
MSH5-201ENST00000375703 DPEP1P16444 411 aa15.37■□□□□ 0.05
MSH5-201ENST00000375703 ARL2P36404 184 aa15.37■□□□□ 0.05
MSH5-201ENST00000375703 PLCB3Q01970 1234 aa15.37■□□□□ 0.05
MSH5-201ENST00000375703 MCL1Q07820 350 aa15.37■□□□□ 0.05
MSH5-201ENST00000375703 MGAT5Q09328 741 aa15.37■□□□□ 0.05
MSH5-201ENST00000375703 SPOCD1Q6ZMY3 1216 aa15.37■□□□□ 0.05
MSH5-201ENST00000375703 MCEEQ96PE7 176 aa15.37■□□□□ 0.05
MSH5-201ENST00000375703 DHX33Q9H6R0 707 aaKnown RBP15.37■□□□□ 0.05
MSH5-201ENST00000375703 VPS37BQ9H9H4 285 aa15.37■□□□□ 0.05
MSH5-201ENST00000375703 ARHGEF3Q9NR81 526 aa15.37■□□□□ 0.05
MSH5-201ENST00000375703 LOC102724159A0A0B4J2E5 919 aa15.37■□□□□ 0.05
MSH5-201ENST00000375703 STAM2O75886 525 aa15.37■□□□□ 0.05
MSH5-201ENST00000375703 OATP04181 439 aa15.37■□□□□ 0.05
MSH5-201ENST00000375703 MYCNP04198 464 aaPredicted RBP15.37■□□□□ 0.05
MSH5-201ENST00000375703 KRT15P19012 456 aa15.37■□□□□ 0.05
MSH5-201ENST00000375703 KCNA3P22001 575 aa15.37■□□□□ 0.05
MSH5-201ENST00000375703 ACVR2BQ13705 512 aa15.37■□□□□ 0.05
MSH5-201ENST00000375703 TMEM132BQ14DG7 1078 aa15.37■□□□□ 0.05
MSH5-201ENST00000375703 PWP2Q15269 919 aaKnown RBP15.37■□□□□ 0.05
MSH5-201ENST00000375703 LRRC38Q5VT99 294 aa15.37■□□□□ 0.05
MSH5-201ENST00000375703 DNAJC24Q6P3W2 148 aa15.37■□□□□ 0.05
MSH5-201ENST00000375703 TDRPQ86YL5 185 aa15.37■□□□□ 0.05
MSH5-201ENST00000375703 SLC7A3Q8WY07 619 aa15.37■□□□□ 0.05
MSH5-201ENST00000375703 TRABDQ9H4I3 376 aa15.37■□□□□ 0.05
MSH5-201ENST00000375703 ZNF214Q9UL59 606 aaPredicted RBP15.37■□□□□ 0.05
MSH5-201ENST00000375703 MAFBQ9Y5Q3 323 aaPredicted RBP15.37■□□□□ 0.05
MSH5-201ENST00000375703 ASMTLO95671 621 aa15.36■□□□□ 0.05
MSH5-201ENST00000375703 KRT16P08779 473 aa15.36■□□□□ 0.05
MSH5-201ENST00000375703 OAZ1P54368 228 aa15.36■□□□□ 0.05
MSH5-201ENST00000375703 ZNF252P-AS1Q0IIN9 211 aa15.36■□□□□ 0.05
MSH5-201ENST00000375703 FASTKD3Q14CZ7 662 aaKnown RBP15.36■□□□□ 0.05
MSH5-201ENST00000375703 MORF4L2Q15014 288 aa15.36■□□□□ 0.05
MSH5-201ENST00000375703 CAPN12Q6ZSI9 719 aa15.36■□□□□ 0.05
MSH5-201ENST00000375703 ECHDC2Q86YB7 292 aa15.36■□□□□ 0.05
MSH5-201ENST00000375703 HAUS1Q96CS2 278 aa15.36■□□□□ 0.05
MSH5-201ENST00000375703 STK38LQ9Y2H1 464 aa15.36■□□□□ 0.05
MSH5-201ENST00000375703 L3MBTL1Q9Y468 752 aa15.36■□□□□ 0.05
MSH5-201ENST00000375703 A0A1B0GUA9 196 aa15.36■□□□□ 0.05
MSH5-201ENST00000375703 ELF1P32519 619 aa15.36■□□□□ 0.05
MSH5-201ENST00000375703 ZNF132P52740 706 aa15.36■□□□□ 0.05
MSH5-201ENST00000375703 PKN2Q16513 984 aaKnown RBP15.36■□□□□ 0.05
MSH5-201ENST00000375703 ZNF394Q53GI3 561 aa15.36■□□□□ 0.05
MSH5-201ENST00000375703 TFDP3Q5H9I0 405 aa15.36■□□□□ 0.05
MSH5-201ENST00000375703 NBPF12Q5TAG4 269 aaPredicted RBP15.36■□□□□ 0.05
MSH5-201ENST00000375703 TXNRD3NBQ6F5E7 133 aa15.36■□□□□ 0.05
MSH5-201ENST00000375703 ZBED8Q8IZ13 594 aa15.36■□□□□ 0.05
MSH5-201ENST00000375703 ZNF280CQ8ND82 737 aa15.36■□□□□ 0.05
MSH5-201ENST00000375703 DENND1AQ8TEH3 1009 aa15.36■□□□□ 0.05
MSH5-201ENST00000375703 KCNN1Q92952 543 aa15.36■□□□□ 0.05
MSH5-201ENST00000375703 ACSF2Q96CM8 615 aaPredicted RBP15.36■□□□□ 0.05
MSH5-201ENST00000375703 MRRFQ96E11 262 aaKnown RBP15.36■□□□□ 0.05
MSH5-201ENST00000375703 SMC6Q96SB8 1091 aa15.36■□□□□ 0.05
MSH5-201ENST00000375703 TRIM33Q9UPN9 1127 aa15.36■□□□□ 0.05
MSH5-201ENST00000375703 RGPD3A6NKT7 1758 aaPredicted RBP15.36■□□□□ 0.05
MSH5-201ENST00000375703 RGPD4Q7Z3J3 1758 aa15.36■□□□□ 0.05
MSH5-201ENST00000375703 ADGRA2Q96PE1 1338 aa15.35■□□□□ 0.05
MSH5-201ENST00000375703 ALOX15BO15296 676 aa15.35■□□□□ 0.05
MSH5-201ENST00000375703 MAGEB2O15479 319 aa15.35■□□□□ 0.05
MSH5-201ENST00000375703 IFNB1P01574 187 aa15.35■□□□□ 0.05
MSH5-201ENST00000375703 EDN1P05305 212 aa15.35■□□□□ 0.05
MSH5-201ENST00000375703 VCPP55072 806 aaKnown RBP15.35■□□□□ 0.05
MSH5-201ENST00000375703 OGDHQ02218 1023 aa15.35■□□□□ 0.05
MSH5-201ENST00000375703 DNAJC3Q13217 504 aa15.35■□□□□ 0.05
MSH5-201ENST00000375703 SPARCL1Q14515 664 aa15.35■□□□□ 0.05
MSH5-201ENST00000375703 ASRGL1Q7L266 308 aa15.35■□□□□ 0.05
MSH5-201ENST00000375703 TMEM35BQ8NCS4 154 aa15.35■□□□□ 0.05
MSH5-201ENST00000375703 AGAP11Q8TF27 550 aa15.35■□□□□ 0.05
MSH5-201ENST00000375703 ZNF526Q8TF50 670 aaPredicted RBP15.35■□□□□ 0.05
MSH5-201ENST00000375703 N4BP2L2Q92802 583 aaPredicted RBP15.35■□□□□ 0.05
MSH5-201ENST00000375703 TMEM121Q9BTD3 319 aa15.35■□□□□ 0.05
MSH5-201ENST00000375703 AS3MTQ9HBK9 375 aa15.35■□□□□ 0.05
MSH5-201ENST00000375703 STK32BQ9NY57 414 aa15.35■□□□□ 0.05
MSH5-201ENST00000375703 hCG_1818297A0A087WSY0 165 aa15.35■□□□□ 0.05
MSH5-201ENST00000375703 LRRD1A4D1F6 860 aa15.35■□□□□ 0.05
MSH5-201ENST00000375703 SGK1O00141 431 aa15.35■□□□□ 0.05
MSH5-201ENST00000375703 ATP2A1O14983 1001 aa15.35■□□□□ 0.05
MSH5-201ENST00000375703 PRPF4O43172 522 aaKnown RBP eCLIP15.35■□□□□ 0.05
MSH5-201ENST00000375703 ATG7O95352 703 aa15.35■□□□□ 0.05
MSH5-201ENST00000375703 ALADP13716 330 aa15.35■□□□□ 0.05
MSH5-201ENST00000375703 HMGCS2P54868 508 aa15.35■□□□□ 0.05
MSH5-201ENST00000375703 TGFB2P61812 414 aa15.35■□□□□ 0.05
MSH5-201ENST00000375703 CCDC15Q0P6D6 951 aa15.35■□□□□ 0.05
MSH5-201ENST00000375703 PIGHQ14442 188 aaPredicted RBP15.35■□□□□ 0.05
MSH5-201ENST00000375703 OASLQ15646 514 aaKnown RBP15.35■□□□□ 0.05
MSH5-201ENST00000375703 WDR72Q3MJ13 1102 aa15.35■□□□□ 0.05
MSH5-201ENST00000375703 ACCSLQ4AC99 568 aa15.35■□□□□ 0.05
MSH5-201ENST00000375703 CENPUQ71F23 418 aa15.35■□□□□ 0.05
MSH5-201ENST00000375703 STAMBPL1Q96FJ0 436 aa15.35■□□□□ 0.05
MSH5-201ENST00000375703 THOC1Q96FV9 657 aaKnown RBP15.35■□□□□ 0.05
MSH5-201ENST00000375703 TMEM134Q9H6X4 195 aa15.35■□□□□ 0.05
MSH5-201ENST00000375703 ACAD9Q9H845 621 aa15.35■□□□□ 0.05
MSH5-201ENST00000375703 KIF9Q9HAQ2 790 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms