RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 ZNF568Q3ZCX4 644 aa13.2□□□□□ -0.3
LSM2-208ENST00000375661 CTXN3Q4LDR2 81 aa13.2□□□□□ -0.3
LSM2-208ENST00000375661 ZNF280DQ6N043 979 aa13.2□□□□□ -0.3
LSM2-208ENST00000375661 APPL2Q8NEU8 664 aa13.2□□□□□ -0.3
LSM2-208ENST00000375661 DDX1Q92499 740 aaKnown RBP13.2□□□□□ -0.3
LSM2-208ENST00000375661 ACAP3Q96P50 834 aa13.2□□□□□ -0.3
LSM2-208ENST00000375661 ACO2Q99798 780 aaKnown RBP13.2□□□□□ -0.3
LSM2-208ENST00000375661 OXCT2Q9BYC2 517 aaPredicted RBP13.2□□□□□ -0.3
LSM2-208ENST00000375661 MRPL4Q9BYD3 311 aaKnown RBP13.2□□□□□ -0.3
LSM2-208ENST00000375661 CDT1Q9H211 546 aa13.2□□□□□ -0.3
LSM2-208ENST00000375661 PARVGQ9HBI0 331 aa13.2□□□□□ -0.3
LSM2-208ENST00000375661 PTPRHQ9HD43 1115 aa13.2□□□□□ -0.3
LSM2-208ENST00000375661 ASAH2Q9NR71 780 aa13.2□□□□□ -0.3
LSM2-208ENST00000375661 CNTN3Q9P232 1028 aa13.2□□□□□ -0.3
LSM2-208ENST00000375661 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.2□□□□□ -0.3
LSM2-208ENST00000375661 TPRP12270 2363 aaKnown RBP13.19□□□□□ -0.3
LSM2-208ENST00000375661 ARNTLO00327 626 aa13.19□□□□□ -0.3
LSM2-208ENST00000375661 CHADO15335 359 aa13.19□□□□□ -0.3
LSM2-208ENST00000375661 SLC16A4O15374 487 aa13.19□□□□□ -0.3
LSM2-208ENST00000375661 TBCAO75347 108 aaKnown RBP13.19□□□□□ -0.3
LSM2-208ENST00000375661 MOSPD3O75425 235 aa13.19□□□□□ -0.3
LSM2-208ENST00000375661 MCF2P10911 925 aa13.19□□□□□ -0.3
LSM2-208ENST00000375661 IDEP14735 1019 aa13.19□□□□□ -0.3
LSM2-208ENST00000375661 ARPP19P56211 112 aa13.19□□□□□ -0.3
LSM2-208ENST00000375661 DMP1Q13316 513 aaPredicted RBP13.19□□□□□ -0.3
LSM2-208ENST00000375661 SIM2Q14190 667 aaPredicted RBP13.19□□□□□ -0.3
LSM2-208ENST00000375661 PRR23BQ6ZRT6 265 aa13.19□□□□□ -0.3
LSM2-208ENST00000375661 TAS1R3Q7RTX0 852 aa13.19□□□□□ -0.3
LSM2-208ENST00000375661 SFR1Q86XK3 245 aa13.19□□□□□ -0.3
LSM2-208ENST00000375661 MYCT1Q8N699 235 aa13.19□□□□□ -0.3
LSM2-208ENST00000375661 CEP120Q8N960 986 aa13.19□□□□□ -0.3
LSM2-208ENST00000375661 ZSCAN18Q8TBC5 510 aaPredicted RBP13.19□□□□□ -0.3
LSM2-208ENST00000375661 ZSWIM3Q96MP5 696 aa13.19□□□□□ -0.3
LSM2-208ENST00000375661 TIGD1Q96MW7 591 aa13.19□□□□□ -0.3
LSM2-208ENST00000375661 ZMAT2Q96NC0 199 aaKnown RBP13.19□□□□□ -0.3
LSM2-208ENST00000375661 ZHX3Q9H4I2 956 aa13.19□□□□□ -0.3
LSM2-208ENST00000375661 C8orf33Q9H7E9 229 aaPredicted RBP13.19□□□□□ -0.3
LSM2-208ENST00000375661 KMT5AQ9NQR1 393 aa13.19□□□□□ -0.3
LSM2-208ENST00000375661 SEMA4GQ9NTN9 838 aa13.19□□□□□ -0.3
LSM2-208ENST00000375661 LARSQ9P2J5 1176 aaKnown RBP13.19□□□□□ -0.3
LSM2-208ENST00000375661 ARHGAP28Q9P2N2 729 aa13.19□□□□□ -0.3
LSM2-208ENST00000375661 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.19□□□□□ -0.3
LSM2-208ENST00000375661 KIF26AQ9ULI4 1882 aaPredicted RBP13.19□□□□□ -0.3
LSM2-208ENST00000375661 KLRC4O43908 158 aa13.18□□□□□ -0.3
LSM2-208ENST00000375661 TRAK2O60296 914 aa13.18□□□□□ -0.3
LSM2-208ENST00000375661 PROZP22891 400 aa13.18□□□□□ -0.3
LSM2-208ENST00000375661 CCNE1P24864 410 aa13.18□□□□□ -0.3
LSM2-208ENST00000375661 NMT1P30419 496 aaKnown RBP13.18□□□□□ -0.3
LSM2-208ENST00000375661 HOXA6P31267 233 aa13.18□□□□□ -0.3
LSM2-208ENST00000375661 MCM4P33991 863 aa13.18□□□□□ -0.3
LSM2-208ENST00000375661 NCKAP1LP55160 1127 aa13.18□□□□□ -0.3
LSM2-208ENST00000375661 ASIC1P78348 528 aa13.18□□□□□ -0.3
LSM2-208ENST00000375661 SATB1Q01826 763 aa13.18□□□□□ -0.3
LSM2-208ENST00000375661 EHHADHQ08426 723 aa13.18□□□□□ -0.3
LSM2-208ENST00000375661 TWF1Q12792 350 aa13.18□□□□□ -0.3
LSM2-208ENST00000375661 PLD1Q13393 1074 aa13.18□□□□□ -0.3
LSM2-208ENST00000375661 ST3GAL2Q16842 350 aa13.18□□□□□ -0.3
LSM2-208ENST00000375661 PPM1JQ5JR12 505 aa13.18□□□□□ -0.3
LSM2-208ENST00000375661 DGKKQ5KSL6 1271 aa13.18□□□□□ -0.3
LSM2-208ENST00000375661 PRR23CQ6ZRP0 262 aa13.18□□□□□ -0.3
LSM2-208ENST00000375661 UNC13DQ70J99 1090 aa13.18□□□□□ -0.3
LSM2-208ENST00000375661 LONP2Q86WA8 852 aa13.18□□□□□ -0.3
LSM2-208ENST00000375661 YAF2Q8IY57 180 aa13.18□□□□□ -0.3
LSM2-208ENST00000375661 HS6ST3Q8IZP7 471 aa13.18□□□□□ -0.3
LSM2-208ENST00000375661 TMEM161BQ8NDZ6 487 aa13.18□□□□□ -0.3
LSM2-208ENST00000375661 BEST2Q8NFU1 509 aa13.18□□□□□ -0.3
LSM2-208ENST00000375661 CSGALNACT1Q8TDX6 532 aa13.18□□□□□ -0.3
LSM2-208ENST00000375661 KCNN1Q92952 543 aa13.18□□□□□ -0.3
LSM2-208ENST00000375661 PANK4Q9NVE7 773 aa13.18□□□□□ -0.3
LSM2-208ENST00000375661 CEP72Q9P209 647 aa13.18□□□□□ -0.3
LSM2-208ENST00000375661 KCNG1Q9UIX4 513 aa13.18□□□□□ -0.3
LSM2-208ENST00000375661 PCDHB8Q9UN66 801 aa13.18□□□□□ -0.3
LSM2-208ENST00000375661 SPAG17Q6Q759 2223 aa13.17□□□□□ -0.3
LSM2-208ENST00000375661 ACACBO00763 2458 aa13.17□□□□□ -0.3
LSM2-208ENST00000375661 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.17□□□□□ -0.3
LSM2-208ENST00000375661 PVALEFA0A1B0GWK0 134 aa13.17□□□□□ -0.3
LSM2-208ENST00000375661 HEPACAM2A8MVW5 462 aa13.17□□□□□ -0.3
LSM2-208ENST00000375661 NRG2O14511 850 aaPredicted RBP13.17□□□□□ -0.3
LSM2-208ENST00000375661 ABLIM1O14639 778 aa13.17□□□□□ -0.3
LSM2-208ENST00000375661 OAZ2O95190 189 aa13.17□□□□□ -0.3
LSM2-208ENST00000375661 MAPTP10636 758 aaKnown RBP13.17□□□□□ -0.3
LSM2-208ENST00000375661 MYL4P12829 197 aa13.17□□□□□ -0.3
LSM2-208ENST00000375661 GAP43P17677 238 aa13.17□□□□□ -0.3
LSM2-208ENST00000375661 VIPR2P41587 438 aa13.17□□□□□ -0.3
LSM2-208ENST00000375661 SMTNP53814 917 aa13.17□□□□□ -0.3
LSM2-208ENST00000375661 OSTNP61366 133 aa13.17□□□□□ -0.3
LSM2-208ENST00000375661 FCHO2Q0JRZ9 810 aa13.17□□□□□ -0.3
LSM2-208ENST00000375661 DPYDQ12882 1025 aa13.17□□□□□ -0.3
LSM2-208ENST00000375661 LPAL2Q16609 132 aa13.17□□□□□ -0.3
LSM2-208ENST00000375661 MPZL3Q6UWV2 235 aa13.17□□□□□ -0.3
LSM2-208ENST00000375661 ZNF720Q7Z2F6 126 aa13.17□□□□□ -0.3
LSM2-208ENST00000375661 HAUS6Q7Z4H7 955 aa13.17□□□□□ -0.3
LSM2-208ENST00000375661 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.17□□□□□ -0.3
LSM2-208ENST00000375661 CCDC65Q8IXS2 484 aa13.17□□□□□ -0.3
LSM2-208ENST00000375661 ELOA2Q8IYF1 753 aaPredicted RBP13.17□□□□□ -0.3
LSM2-208ENST00000375661 SYNPOQ8N3V7 929 aa13.17□□□□□ -0.3
LSM2-208ENST00000375661 HPS3Q969F9 1004 aa13.17□□□□□ -0.3
LSM2-208ENST00000375661 TCHPQ9BT92 498 aa13.17□□□□□ -0.3
LSM2-208ENST00000375661 STRA6Q9BX79 667 aa13.17□□□□□ -0.3
LSM2-208ENST00000375661 FGFBP2Q9BYJ0 223 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms