RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 IPPQ9Y573 584 aa17.95■□□□□ 0.46
PTPN20-203ENST00000374342 SPDYE4A6NLX3 237 aa17.94■□□□□ 0.46
PTPN20-203ENST00000374342 TLR3O15455 904 aaKnown RBP17.94■□□□□ 0.46
PTPN20-203ENST00000374342 GJB6O95452 261 aa17.94■□□□□ 0.46
PTPN20-203ENST00000374342 HMGCRP04035 888 aa17.94■□□□□ 0.46
PTPN20-203ENST00000374342 CALB1P05937 261 aa17.94■□□□□ 0.46
PTPN20-203ENST00000374342 CTNNA2P26232 953 aa17.94■□□□□ 0.46
PTPN20-203ENST00000374342 KCNA10Q16322 511 aa17.94■□□□□ 0.46
PTPN20-203ENST00000374342 GLE1Q53GS7 698 aaKnown RBP17.94■□□□□ 0.46
PTPN20-203ENST00000374342 BEND6Q5SZJ8 279 aaPredicted RBP17.94■□□□□ 0.46
PTPN20-203ENST00000374342 AADACL2Q6P093 401 aa17.94■□□□□ 0.46
PTPN20-203ENST00000374342 RUBCNQ92622 972 aa17.94■□□□□ 0.46
PTPN20-203ENST00000374342 RNF39Q9H2S5 420 aa17.94■□□□□ 0.46
PTPN20-203ENST00000374342 MRPL47Q9HD33 250 aaKnown RBP17.94■□□□□ 0.46
PTPN20-203ENST00000374342 TTC7AQ9ULT0 858 aaPredicted RBP17.94■□□□□ 0.46
PTPN20-203ENST00000374342 CENPFP49454 3210 aa17.94■□□□□ 0.46
PTPN20-203ENST00000374342 CCDC66A2RUB6 948 aa17.94■□□□□ 0.46
PTPN20-203ENST00000374342 MYO1FO00160 1098 aa17.94■□□□□ 0.46
PTPN20-203ENST00000374342 ITGA4P13612 1032 aa17.94■□□□□ 0.46
PTPN20-203ENST00000374342 CDH5P33151 784 aaPredicted RBP17.94■□□□□ 0.46
PTPN20-203ENST00000374342 MAMLD1Q13495 774 aa17.94■□□□□ 0.46
PTPN20-203ENST00000374342 ZBTB6Q15916 424 aa17.94■□□□□ 0.46
PTPN20-203ENST00000374342 SEL1L2Q5TEA6 688 aa17.94■□□□□ 0.46
PTPN20-203ENST00000374342 PLEKHA7Q6IQ23 1121 aa17.94■□□□□ 0.46
PTPN20-203ENST00000374342 ALKAL1Q6UXT8 129 aa17.94■□□□□ 0.46
PTPN20-203ENST00000374342 SERINC5Q86VE9 423 aa17.94■□□□□ 0.46
PTPN20-203ENST00000374342 TMEM176AQ96HP8 235 aa17.94■□□□□ 0.46
PTPN20-203ENST00000374342 UBQLN1Q9UMX0 589 aaKnown RBP17.94■□□□□ 0.46
PTPN20-203ENST00000374342 CCDC188H7C350 402 aa17.93■□□□□ 0.46
PTPN20-203ENST00000374342 SASH3O75995 380 aa17.93■□□□□ 0.46
PTPN20-203ENST00000374342 HEXIM1O94992 359 aaKnown RBP17.93■□□□□ 0.46
PTPN20-203ENST00000374342 MYBL2P10244 700 aa17.93■□□□□ 0.46
PTPN20-203ENST00000374342 NDST1P52848 882 aa17.93■□□□□ 0.46
PTPN20-203ENST00000374342 INCA1Q0VD86 236 aa17.93■□□□□ 0.46
PTPN20-203ENST00000374342 MAP9Q49MG5 647 aa17.93■□□□□ 0.46
PTPN20-203ENST00000374342 ADAT2Q7Z6V5 191 aaKnown RBP17.93■□□□□ 0.46
PTPN20-203ENST00000374342 SMG8Q8ND04 991 aaKnown RBP17.93■□□□□ 0.46
PTPN20-203ENST00000374342 KLHDC9Q8NEP7 349 aa17.93■□□□□ 0.46
PTPN20-203ENST00000374342 ZNF518BQ9C0D4 1074 aa17.93■□□□□ 0.46
PTPN20-203ENST00000374342 DDX47Q9H0S4 455 aaKnown RBP17.93■□□□□ 0.46
PTPN20-203ENST00000374342 PARVAQ9NVD7 372 aa17.93■□□□□ 0.46
PTPN20-203ENST00000374342 BARX2Q9UMQ3 279 aaPredicted RBP17.93■□□□□ 0.46
PTPN20-203ENST00000374342 SNX9Q9Y5X1 595 aa17.93■□□□□ 0.46
PTPN20-203ENST00000374342 RAD51CO43502 376 aa17.92■□□□□ 0.46
PTPN20-203ENST00000374342 RPS6KA5O75582 802 aa17.92■□□□□ 0.46
PTPN20-203ENST00000374342 HOXD10P28358 340 aa17.92■□□□□ 0.46
PTPN20-203ENST00000374342 PEX5P50542 639 aa17.92■□□□□ 0.46
PTPN20-203ENST00000374342 CYP4A22Q5TCH4 519 aa17.92■□□□□ 0.46
PTPN20-203ENST00000374342 DNAJC24Q6P3W2 148 aa17.92■□□□□ 0.46
PTPN20-203ENST00000374342 DPH6Q7L8W6 267 aa17.92■□□□□ 0.46
PTPN20-203ENST00000374342 SESTD1Q86VW0 696 aa17.92■□□□□ 0.46
PTPN20-203ENST00000374342 ERICH1Q86X53 443 aa17.92■□□□□ 0.46
PTPN20-203ENST00000374342 WDTC1Q8N5D0 677 aa17.92■□□□□ 0.46
PTPN20-203ENST00000374342 LRRC52Q8N7C0 313 aa17.92■□□□□ 0.46
PTPN20-203ENST00000374342 NAP1L3Q99457 506 aaPredicted RBP17.92■□□□□ 0.46
PTPN20-203ENST00000374342 SENP6Q9GZR1 1112 aaPredicted RBP17.92■□□□□ 0.46
PTPN20-203ENST00000374342 SMIM28A0A1B0GU29 152 aa17.92■□□□□ 0.46
PTPN20-203ENST00000374342 M0QYV0 167 aa17.92■□□□□ 0.46
PTPN20-203ENST00000374342 PROSCO94903 275 aa17.92■□□□□ 0.46
PTPN20-203ENST00000374342 CST5P28325 142 aaPredicted RBP17.92■□□□□ 0.46
PTPN20-203ENST00000374342 DAB2IPQ5VWQ8 1189 aa17.92■□□□□ 0.46
PTPN20-203ENST00000374342 C9orf57Q5W0N0 161 aa17.92■□□□□ 0.46
PTPN20-203ENST00000374342 RAET1EQ8TD07 263 aa17.92■□□□□ 0.46
PTPN20-203ENST00000374342 FUT8Q9BYC5 575 aa17.92■□□□□ 0.46
PTPN20-203ENST00000374342 PCDHA3Q9Y5H8 950 aa17.92■□□□□ 0.46
PTPN20-203ENST00000374342 ZSCAN5CA6NGD5 496 aaPredicted RBP17.91■□□□□ 0.46
PTPN20-203ENST00000374342 MICAL2O94851 1124 aa17.91■□□□□ 0.46
PTPN20-203ENST00000374342 CHRNA1P02708 482 aa17.91■□□□□ 0.46
PTPN20-203ENST00000374342 TNNT3P45378 269 aaPredicted RBP17.91■□□□□ 0.46
PTPN20-203ENST00000374342 APLP1P51693 650 aa17.91■□□□□ 0.46
PTPN20-203ENST00000374342 RWDD2BP57060 319 aa17.91■□□□□ 0.46
PTPN20-203ENST00000374342 NFX1Q12986 1120 aaKnown RBP17.91■□□□□ 0.46
PTPN20-203ENST00000374342 CLUL1Q15846 466 aa17.91■□□□□ 0.46
PTPN20-203ENST00000374342 PTGISQ16647 500 aa17.91■□□□□ 0.46
PTPN20-203ENST00000374342 SGO2Q562F6 1265 aa17.91■□□□□ 0.46
PTPN20-203ENST00000374342 CCSAPQ6IQ19 270 aaPredicted RBP17.91■□□□□ 0.46
PTPN20-203ENST00000374342 TTC39CQ8N584 583 aa17.91■□□□□ 0.46
PTPN20-203ENST00000374342 PCSK9Q8NBP7 692 aaKnown RBP17.91■□□□□ 0.46
PTPN20-203ENST00000374342 ARRDC4Q8NCT1 418 aa17.91■□□□□ 0.46
PTPN20-203ENST00000374342 FEZF2Q8TBJ5 459 aa17.91■□□□□ 0.46
PTPN20-203ENST00000374342 UBE2Q2Q8WVN8 375 aa17.91■□□□□ 0.46
PTPN20-203ENST00000374342 HEXIM2Q96MH2 286 aaKnown RBP17.91■□□□□ 0.46
PTPN20-203ENST00000374342 MCEEQ96PE7 176 aa17.91■□□□□ 0.46
PTPN20-203ENST00000374342 MRPL45Q9BRJ2 306 aaKnown RBP17.91■□□□□ 0.46
PTPN20-203ENST00000374342 CFHR5Q9BXR6 569 aa17.91■□□□□ 0.46
PTPN20-203ENST00000374342 DDX20Q9UHI6 824 aaKnown RBP17.91■□□□□ 0.46
PTPN20-203ENST00000374342 CYTH4Q9UIA0 394 aa17.91■□□□□ 0.46
PTPN20-203ENST00000374342 ST3GAL5Q9UNP4 418 aa17.91■□□□□ 0.46
PTPN20-203ENST00000374342 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.91■□□□□ 0.46
PTPN20-203ENST00000374342 GOLGA6L10A0A0M3HER8 536 aa17.9■□□□□ 0.46
PTPN20-203ENST00000374342 GRIN2DO15399 1336 aa17.9■□□□□ 0.46
PTPN20-203ENST00000374342 ATP8B1O43520 1251 aa17.9■□□□□ 0.46
PTPN20-203ENST00000374342 XPOTO43592 962 aaKnown RBP17.9■□□□□ 0.46
PTPN20-203ENST00000374342 CD4P01730 458 aa17.9■□□□□ 0.46
PTPN20-203ENST00000374342 GLI1P08151 1106 aa17.9■□□□□ 0.46
PTPN20-203ENST00000374342 PYGMP11217 842 aa17.9■□□□□ 0.46
PTPN20-203ENST00000374342 VDRP11473 427 aa17.9■□□□□ 0.46
PTPN20-203ENST00000374342 KCNE1P15382 129 aa17.9■□□□□ 0.46
PTPN20-203ENST00000374342 ATF7P17544 494 aaPredicted RBP17.9■□□□□ 0.46
PTPN20-203ENST00000374342 THPOP40225 353 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms