RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 FOXD4L6Q3SYB3 417 aaPredicted RBP20.82■□□□□ 0.92
TRAPPC3-204ENST00000373166 FOXD4L3Q6VB84 417 aaPredicted RBP20.82■□□□□ 0.92
TRAPPC3-204ENST00000373166 FAM200AQ8TCP9 573 aa20.82■□□□□ 0.92
TRAPPC3-204ENST00000373166 RBM12Q9NTZ6 932 aaKnown RBP20.82■□□□□ 0.92
TRAPPC3-204ENST00000373166 ANKFY1Q9P2R3 1169 aa20.82■□□□□ 0.92
TRAPPC3-204ENST00000373166 YIPF1Q9Y548 306 aa20.82■□□□□ 0.92
TRAPPC3-204ENST00000373166 NCANO14594 1321 aa20.81■□□□□ 0.92
TRAPPC3-204ENST00000373166 A0A1W2PRU2 124 aa20.81■□□□□ 0.92
TRAPPC3-204ENST00000373166 K7ESF4 209 aa20.81■□□□□ 0.92
TRAPPC3-204ENST00000373166 EPHB3P54753 998 aa20.81■□□□□ 0.92
TRAPPC3-204ENST00000373166 PKP1Q13835 747 aa20.81■□□□□ 0.92
TRAPPC3-204ENST00000373166 HEATR6Q6AI08 1181 aaKnown RBP20.81■□□□□ 0.92
TRAPPC3-204ENST00000373166 ATL3Q6DD88 541 aa20.81■□□□□ 0.92
TRAPPC3-204ENST00000373166 CEP68Q76N32 757 aa20.81■□□□□ 0.92
TRAPPC3-204ENST00000373166 HAUS6Q7Z4H7 955 aa20.81■□□□□ 0.92
TRAPPC3-204ENST00000373166 RALGPS2Q86X27 583 aaPredicted RBP20.81■□□□□ 0.92
TRAPPC3-204ENST00000373166 BEST2Q8NFU1 509 aa20.81■□□□□ 0.92
TRAPPC3-204ENST00000373166 RSPRY1Q96DX4 576 aa20.81■□□□□ 0.92
TRAPPC3-204ENST00000373166 BICD1Q96G01 975 aa20.81■□□□□ 0.92
TRAPPC3-204ENST00000373166 MYBPHLA2RUH7 354 aa20.8■□□□□ 0.92
TRAPPC3-204ENST00000373166 SPECC1L-ADORA2AF8WAN1 911 aa20.8■□□□□ 0.92
TRAPPC3-204ENST00000373166 ABLIM1O14639 778 aa20.8■□□□□ 0.92
TRAPPC3-204ENST00000373166 TRAK2O60296 914 aa20.8■□□□□ 0.92
TRAPPC3-204ENST00000373166 GDF9O60383 454 aa20.8■□□□□ 0.92
TRAPPC3-204ENST00000373166 CUTAO60888 179 aa20.8■□□□□ 0.92
TRAPPC3-204ENST00000373166 TOM1L1O75674 476 aa20.8■□□□□ 0.92
TRAPPC3-204ENST00000373166 OAZ2O95190 189 aa20.8■□□□□ 0.92
TRAPPC3-204ENST00000373166 ABCD1P33897 745 aa20.8■□□□□ 0.92
TRAPPC3-204ENST00000373166 ALDH1A3P47895 512 aa20.8■□□□□ 0.92
TRAPPC3-204ENST00000373166 SOX9P48436 509 aa20.8■□□□□ 0.92
TRAPPC3-204ENST00000373166 NOLC1Q14978 699 aaKnown RBP eCLIP20.8■□□□□ 0.92
TRAPPC3-204ENST00000373166 SLC10A6Q3KNW5 377 aa20.8■□□□□ 0.92
TRAPPC3-204ENST00000373166 ZPBP2Q6X784 338 aa20.8■□□□□ 0.92
TRAPPC3-204ENST00000373166 Q6ZS52 159 aa20.8■□□□□ 0.92
TRAPPC3-204ENST00000373166 SV2BQ7L1I2 683 aa20.8■□□□□ 0.92
TRAPPC3-204ENST00000373166 ARID3BQ8IVW6 561 aaPredicted RBP20.8■□□□□ 0.92
TRAPPC3-204ENST00000373166 PGLYRP2Q96PD5 576 aa20.8■□□□□ 0.92
TRAPPC3-204ENST00000373166 LRRC3Q9BY71 257 aa20.8■□□□□ 0.92
TRAPPC3-204ENST00000373166 M0QZQ0 153 aa20.79■□□□□ 0.92
TRAPPC3-204ENST00000373166 DPYSL4O14531 572 aa20.79■□□□□ 0.92
TRAPPC3-204ENST00000373166 MEFVO15553 781 aaPredicted RBP20.79■□□□□ 0.92
TRAPPC3-204ENST00000373166 KCNA4P22459 653 aa20.79■□□□□ 0.92
TRAPPC3-204ENST00000373166 HOXA6P31267 233 aa20.79■□□□□ 0.92
TRAPPC3-204ENST00000373166 CTHP32929 405 aa20.79■□□□□ 0.92
TRAPPC3-204ENST00000373166 MATR3P43243 847 aaKnown RBP eCLIP20.79■□□□□ 0.92
TRAPPC3-204ENST00000373166 DUSP4Q13115 394 aa20.79■□□□□ 0.92
TRAPPC3-204ENST00000373166 ARHGAP29Q52LW3 1261 aa20.79■□□□□ 0.92
TRAPPC3-204ENST00000373166 IL31Q6EBC2 164 aa20.79■□□□□ 0.92
TRAPPC3-204ENST00000373166 DYMQ7RTS9 669 aa20.79■□□□□ 0.92
TRAPPC3-204ENST00000373166 USP37Q86T82 979 aa20.79■□□□□ 0.92
TRAPPC3-204ENST00000373166 TMC8Q8IU68 726 aa20.79■□□□□ 0.92
TRAPPC3-204ENST00000373166 FAM160A2Q8N612 972 aaPredicted RBP20.79■□□□□ 0.92
TRAPPC3-204ENST00000373166 PDILTQ8N807 584 aa20.79■□□□□ 0.92
TRAPPC3-204ENST00000373166 KCNN1Q92952 543 aa20.79■□□□□ 0.92
TRAPPC3-204ENST00000373166 ZBTB45Q96K62 511 aaPredicted RBP20.79■□□□□ 0.92
TRAPPC3-204ENST00000373166 TUBGCP4Q9UGJ1 667 aa20.79■□□□□ 0.92
TRAPPC3-204ENST00000373166 CFAP45Q9UL16 551 aa20.79■□□□□ 0.92
TRAPPC3-204ENST00000373166 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.79■□□□□ 0.92
TRAPPC3-204ENST00000373166 OR6C75A6NL08 312 aa20.78■□□□□ 0.92
TRAPPC3-204ENST00000373166 HNRNPDLO14979 420 aaKnown RBP20.78■□□□□ 0.92
TRAPPC3-204ENST00000373166 LIG4P49917 911 aa20.78■□□□□ 0.92
TRAPPC3-204ENST00000373166 BECN1Q14457 450 aa20.78■□□□□ 0.92
TRAPPC3-204ENST00000373166 SEZ6Q53EL9 994 aa20.78■□□□□ 0.92
TRAPPC3-204ENST00000373166 TXNDC11Q6PKC3 985 aa20.78■□□□□ 0.92
TRAPPC3-204ENST00000373166 SYNPOQ8N3V7 929 aa20.78■□□□□ 0.92
TRAPPC3-204ENST00000373166 PANK2Q9BZ23 570 aa20.78■□□□□ 0.92
TRAPPC3-204ENST00000373166 DNAJC25Q9H1X3 360 aa20.78■□□□□ 0.92
TRAPPC3-204ENST00000373166 PLEKHA5Q9HAU0 1116 aa20.78■□□□□ 0.92
TRAPPC3-204ENST00000373166 TBX20Q9UMR3 447 aa20.78■□□□□ 0.92
TRAPPC3-204ENST00000373166 ASB3Q9Y575 518 aa20.78■□□□□ 0.92
TRAPPC3-204ENST00000373166 TIMM13Q9Y5L4 95 aaPredicted RBP20.78■□□□□ 0.92
TRAPPC3-204ENST00000373166 COL4A2P08572 1712 aa20.78■□□□□ 0.92
TRAPPC3-204ENST00000373166 CHD8Q9HCK8 2581 aa20.77■□□□□ 0.92
TRAPPC3-204ENST00000373166 A0A087X0B3 334 aa20.77■□□□□ 0.92
TRAPPC3-204ENST00000373166 CLDN3O15551 220 aa20.77■□□□□ 0.92
TRAPPC3-204ENST00000373166 VNN2O95498 520 aa20.77■□□□□ 0.92
TRAPPC3-204ENST00000373166 FGF19O95750 216 aa20.77■□□□□ 0.92
TRAPPC3-204ENST00000373166 OR4Q2P0C623 313 aa20.77■□□□□ 0.92
TRAPPC3-204ENST00000373166 GPR17Q13304 367 aa20.77■□□□□ 0.92
TRAPPC3-204ENST00000373166 AASDHQ4L235 1098 aaPredicted RBP20.77■□□□□ 0.92
TRAPPC3-204ENST00000373166 WDR5BQ86VZ2 330 aa20.77■□□□□ 0.92
TRAPPC3-204ENST00000373166 GPIHBP1Q8IV16 184 aa20.77■□□□□ 0.92
TRAPPC3-204ENST00000373166 TTC8Q8TAM2 541 aa20.77■□□□□ 0.92
TRAPPC3-204ENST00000373166 ATXN3LQ9H3M9 355 aa20.77■□□□□ 0.92
TRAPPC3-204ENST00000373166 OBP2AQ9NY56 170 aa20.77■□□□□ 0.92
TRAPPC3-204ENST00000373166 GTSE1Q9NYZ3 720 aa20.77■□□□□ 0.92
TRAPPC3-204ENST00000373166 MYMKA6NI61 221 aa20.76■□□□□ 0.91
TRAPPC3-204ENST00000373166 GAP43P17677 238 aa20.76■□□□□ 0.91
TRAPPC3-204ENST00000373166 LRPAP1P30533 357 aa20.76■□□□□ 0.91
TRAPPC3-204ENST00000373166 ME1P48163 572 aa20.76■□□□□ 0.91
TRAPPC3-204ENST00000373166 DNM1Q05193 864 aaKnown RBP20.76■□□□□ 0.91
TRAPPC3-204ENST00000373166 CCINQ13939 588 aa20.76■□□□□ 0.91
TRAPPC3-204ENST00000373166 PON2Q15165 354 aa20.76■□□□□ 0.91
TRAPPC3-204ENST00000373166 ARHGAP15Q53QZ3 475 aa20.76■□□□□ 0.91
TRAPPC3-204ENST00000373166 WDR44Q5JSH3 913 aa20.76■□□□□ 0.91
TRAPPC3-204ENST00000373166 STXBP5Q5T5C0 1151 aa20.76■□□□□ 0.91
TRAPPC3-204ENST00000373166 CENPPQ6IPU0 288 aa20.76■□□□□ 0.91
TRAPPC3-204ENST00000373166 DSTYKQ6XUX3 929 aa20.76■□□□□ 0.91
TRAPPC3-204ENST00000373166 DNAJB7Q7Z6W7 309 aaPredicted RBP20.76■□□□□ 0.91
TRAPPC3-204ENST00000373166 SFR1Q86XK3 245 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms