RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 PLEKHM3Q6ZWE6 761 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 PRPF39Q86UA1 669 aaKnown RBP4.22□□□□□ -1.73
MCF2-203ENST00000370576 CCDC83Q8IWF9 413 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 ZBTB34Q8NCN2 500 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 RUBCNQ92622 972 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 SLF1Q9BQI6 1058 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 CCDC68Q9H2F9 335 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 CUEDC2Q9H467 287 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 SPTLC3Q9NUV7 552 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 NENFQ9UMX5 172 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 PCDHA4Q9UN74 947 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 PLAGL2Q9UPG8 496 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 GREB1Q4ZG55 1949 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 IGLV3-22A0A075B6J6 115 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 TTLL8A6PVC2 850 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 B4E1Z4 1266 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 ZBTB43O43298 467 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 KLRC4O43908 158 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 GJB3O75712 270 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 FAM155BO75949 473 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 FGF18O76093 207 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 ALDH1A2O94788 518 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 HOXA6P31267 233 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 ETV1P50549 477 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 KLHL30Q0D2K2 578 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 CUL4BQ13620 913 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 EARS2Q5JPH6 523 aaKnown RBP4.22□□□□□ -1.73
MCF2-203ENST00000370576 FBXO47Q5MNV8 452 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 NBPF12Q5TAG4 269 aaPredicted RBP4.22□□□□□ -1.73
MCF2-203ENST00000370576 TTC19Q6DKK2 380 aaPredicted RBP4.22□□□□□ -1.73
MCF2-203ENST00000370576 LRRC69Q6ZNQ3 347 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 DHX40Q8IX18 779 aaKnown RBP4.22□□□□□ -1.73
MCF2-203ENST00000370576 PHKBQ93100 1093 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 PPP1R14AQ96A00 147 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 FERMT2Q96AC1 680 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 PIGSQ96S52 555 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 P2RX7Q99572 595 aaKnown RBP4.22□□□□□ -1.73
MCF2-203ENST00000370576 SYT17Q9BSW7 474 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 TMEM106CQ9BVX2 250 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 ADAM33Q9BZ11 813 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 GLT8D2Q9H1C3 349 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 MAGEH1Q9H213 219 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 MRPL46Q9H2W6 279 aaKnown RBP4.22□□□□□ -1.73
MCF2-203ENST00000370576 EHD1Q9H4M9 534 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 SUV39H2Q9H5I1 410 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 CNTD2Q9H8S5 307 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 TRPM5Q9NZQ8 1165 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 KLF18A0A0U1RQI7 1052 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 WNT7AO00755 349 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 AP5Z1O43299 807 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 SMPD2O60906 423 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 GSNP06396 782 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 CYP2D6P10635 497 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 HOXD8P13378 290 aaPredicted RBP4.22□□□□□ -1.73
MCF2-203ENST00000370576 TSHRP16473 764 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 AP2B1P63010 937 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 BMT2Q1RMZ1 405 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 CDKAL1Q5VV42 579 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 KRT40Q6A162 431 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 TMEM179Q6ZVK1 233 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 KDELC2Q7Z4H8 507 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 TNS4Q8IZW8 715 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 CAMKK1Q8N5S9 505 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 FAM71DQ8N9W8 422 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 ETNPPLQ8TBG4 499 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 CCHCR1Q8TD31 782 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 AK8Q96MA6 479 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 MTRQ99707 1265 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 NAPBQ9H115 298 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 TASP1Q9H6P5 420 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 ZNF287Q9HBT7 754 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 PRDM5Q9NQX1 630 aaPredicted RBP4.22□□□□□ -1.73
MCF2-203ENST00000370576 PAPOLBQ9NRJ5 636 aaKnown RBP4.22□□□□□ -1.73
MCF2-203ENST00000370576 DDX18Q9NVP1 670 aaKnown RBP4.22□□□□□ -1.73
MCF2-203ENST00000370576 ZNF70Q9UC06 446 aaPredicted RBP4.22□□□□□ -1.73
MCF2-203ENST00000370576 PPM1HQ9ULR3 514 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 HPCAL4Q9UM19 191 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 PCDHA7Q9UN72 937 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 ATP23Q9Y6H3 246 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 PTPRSQ13332 1948 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 CLRN2A0PK11 232 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 MINDY4BA8MYZ0 360 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 CHURC1-FNTBB4DL54 471 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 TRAF5O00463 557 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 XPOTO43592 962 aaKnown RBP4.21□□□□□ -1.74
MCF2-203ENST00000370576 ASLP04424 464 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 ASGR1P07306 291 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 XRCC6P12956 609 aaKnown RBP eCLIP4.21□□□□□ -1.74
MCF2-203ENST00000370576 JAK1P23458 1154 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 EDNRBP24530 442 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 LIG3P49916 1009 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 MECP2P51608 486 aaKnown RBP4.21□□□□□ -1.74
MCF2-203ENST00000370576 RPS26P62854 115 aaKnown RBP4.21□□□□□ -1.74
MCF2-203ENST00000370576 PTK2Q05397 1052 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 ZNF460Q14592 562 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 CNGA3Q16281 694 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 DPP8Q6V1X1 898 aaPredicted RBP4.21□□□□□ -1.74
MCF2-203ENST00000370576 TRIM72Q6ZMU5 477 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 RUFY4Q6ZNE9 571 aa4.21□□□□□ -1.74
MCF2-203ENST00000370576 GALNT7Q86SF2 657 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms