RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 CACNA2D1P54289 1103 aa18.39■□□□□ 0.53
CHTOP-203ENST00000368690 SHROOM1Q2M3G4 852 aaPredicted RBP18.39■□□□□ 0.53
CHTOP-203ENST00000368690 PCNX4Q63HM2 1172 aa18.39■□□□□ 0.53
CHTOP-203ENST00000368690 PRUNE1Q86TP1 453 aa18.39■□□□□ 0.53
CHTOP-203ENST00000368690 PPM1KQ8N3J5 372 aa18.39■□□□□ 0.53
CHTOP-203ENST00000368690 CYP2W1Q8TAV3 490 aa18.39■□□□□ 0.53
CHTOP-203ENST00000368690 FAM151AQ8WW52 585 aa18.39■□□□□ 0.53
CHTOP-203ENST00000368690 IWS1Q96ST2 819 aa18.39■□□□□ 0.53
CHTOP-203ENST00000368690 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.39■□□□□ 0.53
CHTOP-203ENST00000368690 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.39■□□□□ 0.53
CHTOP-203ENST00000368690 CAPN9O14815 690 aa18.38■□□□□ 0.53
CHTOP-203ENST00000368690 TM9SF1O15321 606 aa18.38■□□□□ 0.53
CHTOP-203ENST00000368690 RALAP11233 206 aa18.38■□□□□ 0.53
CHTOP-203ENST00000368690 SSR1P43307 286 aaKnown RBP18.38■□□□□ 0.53
CHTOP-203ENST00000368690 DAB2IPQ5VWQ8 1189 aa18.38■□□□□ 0.53
CHTOP-203ENST00000368690 LVRNQ6Q4G3 990 aa18.38■□□□□ 0.53
CHTOP-203ENST00000368690 KATNAL2Q8IYT4 538 aa18.38■□□□□ 0.53
CHTOP-203ENST00000368690 PTPRN2Q92932 1015 aa18.38■□□□□ 0.53
CHTOP-203ENST00000368690 VPS11Q9H270 941 aa18.38■□□□□ 0.53
CHTOP-203ENST00000368690 NPHS2Q9NP85 383 aa18.38■□□□□ 0.53
CHTOP-203ENST00000368690 DMAP1Q9NPF5 467 aaPredicted RBP18.38■□□□□ 0.53
CHTOP-203ENST00000368690 SIPA1L1O43166 1804 aa18.38■□□□□ 0.53
CHTOP-203ENST00000368690 K7ENM7 598 aa18.38■□□□□ 0.53
CHTOP-203ENST00000368690 ALOX15BO15296 676 aa18.38■□□□□ 0.53
CHTOP-203ENST00000368690 GYG2O15488 501 aa18.38■□□□□ 0.53
CHTOP-203ENST00000368690 MAP3K7O43318 606 aa18.38■□□□□ 0.53
CHTOP-203ENST00000368690 TGDSO95455 350 aa18.38■□□□□ 0.53
CHTOP-203ENST00000368690 YBX3P16989 372 aaKnown RBP eCLIP18.38■□□□□ 0.531e-9■■□□□ 12.3
CHTOP-203ENST00000368690 GPC3P51654 580 aa18.38■□□□□ 0.53
CHTOP-203ENST00000368690 MORF4L2Q15014 288 aa18.38■□□□□ 0.53
CHTOP-203ENST00000368690 P3H1Q32P28 736 aa18.38■□□□□ 0.53
CHTOP-203ENST00000368690 PLEKHG4Q58EX7 1191 aa18.38■□□□□ 0.53
CHTOP-203ENST00000368690 FOXB2Q5VYV0 432 aa18.38■□□□□ 0.53
CHTOP-203ENST00000368690 MCOLN2Q8IZK6 566 aa18.38■□□□□ 0.53
CHTOP-203ENST00000368690 DAW1Q8N136 415 aa18.38■□□□□ 0.53
CHTOP-203ENST00000368690 ARHGAP24Q8N264 748 aa18.38■□□□□ 0.53
CHTOP-203ENST00000368690 HELQQ8TDG4 1101 aa18.38■□□□□ 0.53
CHTOP-203ENST00000368690 AZIN2Q96A70 460 aa18.38■□□□□ 0.53
CHTOP-203ENST00000368690 ALKBH8Q96BT7 664 aaKnown RBP18.38■□□□□ 0.53
CHTOP-203ENST00000368690 WDR11Q9BZH6 1224 aa18.38■□□□□ 0.53
CHTOP-203ENST00000368690 PHACTR1Q9C0D0 580 aa18.38■□□□□ 0.53
CHTOP-203ENST00000368690 HSPBP1Q9NZL4 362 aa18.38■□□□□ 0.53
CHTOP-203ENST00000368690 KANSL3Q9P2N6 904 aa18.38■□□□□ 0.53
CHTOP-203ENST00000368690 CNTNAP1P78357 1384 aa18.37■□□□□ 0.53
CHTOP-203ENST00000368690 POC1B-GALNT4F8VUJ3 575 aa18.37■□□□□ 0.53
CHTOP-203ENST00000368690 PROSCO94903 275 aa18.37■□□□□ 0.53
CHTOP-203ENST00000368690 FDX1P10109 184 aa18.37■□□□□ 0.53
CHTOP-203ENST00000368690 UNGP13051 313 aaPredicted RBP18.37■□□□□ 0.53
CHTOP-203ENST00000368690 ZNF280AP59817 542 aaPredicted RBP18.37■□□□□ 0.53
CHTOP-203ENST00000368690 LAMB3Q13751 1172 aa18.37■□□□□ 0.53
CHTOP-203ENST00000368690 LLGL1Q15334 1064 aa18.37■□□□□ 0.53
CHTOP-203ENST00000368690 EFHC2Q5JST6 749 aa18.37■□□□□ 0.53
CHTOP-203ENST00000368690 SDCCAG8Q86SQ7 713 aaPredicted RBP18.37■□□□□ 0.53
CHTOP-203ENST00000368690 CDAN1Q8IWY9 1227 aa18.37■□□□□ 0.53
CHTOP-203ENST00000368690 RHOT1Q8IXI2 618 aa18.37■□□□□ 0.53
CHTOP-203ENST00000368690 C4orf33Q8N1A6 199 aa18.37■□□□□ 0.53
CHTOP-203ENST00000368690 EXD1Q8NHP7 514 aa18.37■□□□□ 0.53
CHTOP-203ENST00000368690 PLEKHO2Q8TD55 490 aa18.37■□□□□ 0.53
CHTOP-203ENST00000368690 NCSTNQ92542 709 aa18.37■□□□□ 0.53
CHTOP-203ENST00000368690 STMN2Q93045 179 aa18.37■□□□□ 0.53
CHTOP-203ENST00000368690 FAM210AQ96ND0 272 aa18.37■□□□□ 0.53
CHTOP-203ENST00000368690 ZNF184Q99676 751 aaPredicted RBP18.37■□□□□ 0.53
CHTOP-203ENST00000368690 TRIM55Q9BYV6 548 aa18.37■□□□□ 0.53
CHTOP-203ENST00000368690 OSBPL8Q9BZF1 889 aa18.37■□□□□ 0.53
CHTOP-203ENST00000368690 RNF181Q9P0P0 153 aa18.37■□□□□ 0.53
CHTOP-203ENST00000368690 MTO1Q9Y2Z2 717 aaKnown RBP18.37■□□□□ 0.53
CHTOP-203ENST00000368690 SLC4A7Q9Y6M7 1214 aa18.37■□□□□ 0.53
CHTOP-203ENST00000368690 ARHGEF35A5YM69 484 aa18.37■□□□□ 0.53
CHTOP-203ENST00000368690 F8W8V4 182 aa18.37■□□□□ 0.53
CHTOP-203ENST00000368690 ZBTB39O15060 712 aa18.37■□□□□ 0.53
CHTOP-203ENST00000368690 TBX10O75333 385 aa18.37■□□□□ 0.53
CHTOP-203ENST00000368690 KRT36O76013 467 aa18.37■□□□□ 0.53
CHTOP-203ENST00000368690 IL1BP01584 269 aa18.37■□□□□ 0.53
CHTOP-203ENST00000368690 FGFR1P11362 822 aa18.37■□□□□ 0.53
CHTOP-203ENST00000368690 EEF2P13639 858 aaKnown RBP18.37■□□□□ 0.53
CHTOP-203ENST00000368690 PLS3P13797 630 aa18.37■□□□□ 0.53
CHTOP-203ENST00000368690 SESN3P58005 492 aa18.37■□□□□ 0.53
CHTOP-203ENST00000368690 ZC3H18Q86VM9 953 aaKnown RBP18.37■□□□□ 0.53
CHTOP-203ENST00000368690 ZNF276Q8N554 614 aa18.37■□□□□ 0.53
CHTOP-203ENST00000368690 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.37■□□□□ 0.53
CHTOP-203ENST00000368690 WDR18Q9BV38 432 aa18.37■□□□□ 0.53
CHTOP-203ENST00000368690 ST6GALNAC4Q9H4F1 302 aa18.37■□□□□ 0.53
CHTOP-203ENST00000368690 ARL8BQ9NVJ2 186 aa18.37■□□□□ 0.53
CHTOP-203ENST00000368690 PSMC4P43686 418 aa18.36■□□□□ 0.53
CHTOP-203ENST00000368690 RAP1GDS1P52306 607 aa18.36■□□□□ 0.53
CHTOP-203ENST00000368690 MAPK6Q16659 721 aa18.36■□□□□ 0.53
CHTOP-203ENST00000368690 ABCB5Q2M3G0 1257 aa18.36■□□□□ 0.53
CHTOP-203ENST00000368690 ENOSF1Q7L5Y1 443 aa18.36■□□□□ 0.53
CHTOP-203ENST00000368690 SMC1BQ8NDV3 1235 aa18.36■□□□□ 0.53
CHTOP-203ENST00000368690 PHC3Q8NDX5 983 aa18.36■□□□□ 0.53
CHTOP-203ENST00000368690 MCUR1Q96AQ8 359 aa18.36■□□□□ 0.53
CHTOP-203ENST00000368690 SKA1Q96BD8 255 aa18.36■□□□□ 0.53
CHTOP-203ENST00000368690 GMCL1Q96IK5 515 aa18.36■□□□□ 0.53
CHTOP-203ENST00000368690 GBP5Q96PP8 586 aa18.36■□□□□ 0.53
CHTOP-203ENST00000368690 PCIF1Q9H4Z3 704 aa18.36■□□□□ 0.53
CHTOP-203ENST00000368690 ACP6Q9NPH0 428 aa18.36■□□□□ 0.53
CHTOP-203ENST00000368690 DNAJB4Q9UDY4 337 aa18.36■□□□□ 0.53
CHTOP-203ENST00000368690 ANGPTL2Q9UKU9 493 aa18.36■□□□□ 0.53
CHTOP-203ENST00000368690 UMODL1Q5DID0 1318 aa18.36■□□□□ 0.53
CHTOP-203ENST00000368690 ATP2A1O14983 1001 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms