RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 OR6B3Q8NGW1 331 aa12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 INPP5DQ92835 1189 aa12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 E2F7Q96AV8 911 aa12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 FAM8A1Q9UBU6 413 aa12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 RNF103-CHMP3A0A140T963 221 aa12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 EMC2Q15006 297 aa12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 TATDN2Q93075 761 aa12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 FAR2Q96K12 515 aa12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 AVENQ9NQS1 362 aaPredicted RBP12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 GON4LQ3T8J9 2241 aa12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 MAGEB2O15479 319 aa12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 ALDH18A1P54886 795 aaKnown RBP12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 CATSPER4Q7RTX7 472 aa12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 PCYOX1LQ8NBM8 494 aa12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 DDI1Q8WTU0 396 aa12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 ABTB1Q969K4 478 aaPredicted RBP12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 NAF1Q96HR8 494 aaKnown RBP12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 KCNH7Q9NS40 1196 aa12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 KIAA1257Q9ULG3 409 aa12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 LAMB4A4D0S4 1761 aa12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 KITP10721 976 aa12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 RBP3P10745 1247 aa12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 KCNJ1P48048 391 aa12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 GCNT1Q02742 428 aa12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 DNAJC3Q13217 504 aa12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 RCN1Q15293 331 aa12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 WDR59Q6PJI9 974 aa12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 DPP9Q86TI2 863 aa12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 B2RBV5 119 aa12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 TULP2O00295 520 aa12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 HSPA1AP0DMV8 641 aaKnown RBP12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 HSPA1BP0DMV9 641 aaKnown RBP12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 ACADSBP45954 432 aa12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 KCNMA1Q12791 1236 aa12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 TMEM154Q6P9G4 183 aa12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 CD248Q9HCU0 757 aa12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 POLBP06746 335 aa12.34□□□□□ -0.43
CDC42BPA-202ENST00000366764 PDK2Q15119 407 aa12.34□□□□□ -0.43
CDC42BPA-202ENST00000366764 MCUQ8NE86 351 aa12.34□□□□□ -0.43
CDC42BPA-202ENST00000366764 DHX35Q9H5Z1 703 aaKnown RBP12.34□□□□□ -0.43
CDC42BPA-202ENST00000366764 PPME1Q9Y570 386 aa12.34□□□□□ -0.43
CDC42BPA-202ENST00000366764 STRNO43815 780 aa12.34□□□□□ -0.43
CDC42BPA-202ENST00000366764 UBOX5O94941 541 aa12.34□□□□□ -0.43
CDC42BPA-202ENST00000366764 ATP6V1G2O95670 118 aa12.34□□□□□ -0.43
CDC42BPA-202ENST00000366764 HADHAP40939 763 aa12.34□□□□□ -0.43
CDC42BPA-202ENST00000366764 SLC35C1Q96A29 364 aa12.34□□□□□ -0.43
CDC42BPA-202ENST00000366764 EPAS1Q99814 870 aa12.34□□□□□ -0.43
CDC42BPA-202ENST00000366764 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.34□□□□□ -0.43
CDC42BPA-202ENST00000366764 FDFT1P37268 417 aa12.34□□□□□ -0.43
CDC42BPA-202ENST00000366764 OSTNP61366 133 aa12.34□□□□□ -0.43
CDC42BPA-202ENST00000366764 CDC42EP5Q6NZY7 148 aa12.34□□□□□ -0.43
CDC42BPA-202ENST00000366764 FUKQ8N0W3 1084 aa12.34□□□□□ -0.43
CDC42BPA-202ENST00000366764 RBM46Q8TBY0 533 aaKnown RBP12.34□□□□□ -0.43
CDC42BPA-202ENST00000366764 TDRD3Q9H7E2 651 aaKnown RBP12.34□□□□□ -0.43
CDC42BPA-202ENST00000366764 RIPK2O43353 540 aa12.34□□□□□ -0.43
CDC42BPA-202ENST00000366764 PROSCO94903 275 aa12.34□□□□□ -0.43
CDC42BPA-202ENST00000366764 ZNF394Q53GI3 561 aa12.34□□□□□ -0.43
CDC42BPA-202ENST00000366764 ERMARDQ5T6L9 678 aa12.34□□□□□ -0.43
CDC42BPA-202ENST00000366764 PRPF39Q86UA1 669 aaKnown RBP12.34□□□□□ -0.43
CDC42BPA-202ENST00000366764 TERB1Q8NA31 727 aa12.34□□□□□ -0.43
CDC42BPA-202ENST00000366764 ZNF398Q8TD17 642 aa12.34□□□□□ -0.43
CDC42BPA-202ENST00000366764 GPRASP2Q96D09 838 aa12.34□□□□□ -0.43
CDC42BPA-202ENST00000366764 GTSE1Q9NYZ3 720 aa12.34□□□□□ -0.43
CDC42BPA-202ENST00000366764 TNS2Q63HR2 1409 aa12.34□□□□□ -0.43
CDC42BPA-202ENST00000366764 MRC1P22897 1456 aa12.34□□□□□ -0.43
CDC42BPA-202ENST00000366764 FKBP6O75344 327 aa12.34□□□□□ -0.43
CDC42BPA-202ENST00000366764 MED24O75448 989 aa12.34□□□□□ -0.43
CDC42BPA-202ENST00000366764 WDR72Q3MJ13 1102 aa12.34□□□□□ -0.43
CDC42BPA-202ENST00000366764 CCNYL1Q8N7R7 359 aa12.34□□□□□ -0.43
CDC42BPA-202ENST00000366764 RGPD2P0DJD1 1756 aa12.34□□□□□ -0.43
CDC42BPA-202ENST00000366764 SPATA31A1Q5TZJ5 1347 aa12.34□□□□□ -0.43
CDC42BPA-202ENST00000366764 CTCFP49711 727 aaPredicted RBP12.34□□□□□ -0.43
CDC42BPA-202ENST00000366764 KRT27Q7Z3Y8 459 aa12.34□□□□□ -0.43
CDC42BPA-202ENST00000366764 ICAM1P05362 532 aa12.34□□□□□ -0.43
CDC42BPA-202ENST00000366764 HSD17B4P51659 736 aa12.34□□□□□ -0.43
CDC42BPA-202ENST00000366764 EZH2Q15910 746 aaKnown RBP12.34□□□□□ -0.43
CDC42BPA-202ENST00000366764 LRRC37A3O60309 1634 aa12.34□□□□□ -0.43
CDC42BPA-202ENST00000366764 ANKMY2Q8IV38 441 aa12.34□□□□□ -0.43
CDC42BPA-202ENST00000366764 TBC1D23Q9NUY8 699 aa12.34□□□□□ -0.43
CDC42BPA-202ENST00000366764 MAGEC3Q8TD91 643 aa12.33□□□□□ -0.43
CDC42BPA-202ENST00000366764 HIC2Q96JB3 615 aa12.33□□□□□ -0.43
CDC42BPA-202ENST00000366764 THTPAQ9BU02 230 aa12.33□□□□□ -0.43
CDC42BPA-202ENST00000366764 DLGAP2Q9P1A6 1054 aa12.33□□□□□ -0.43
CDC42BPA-202ENST00000366764 RBAK-RBAKDNI3L0D1 243 aa12.33□□□□□ -0.44
CDC42BPA-202ENST00000366764 ATMINO43313 823 aaPredicted RBP12.33□□□□□ -0.44
CDC42BPA-202ENST00000366764 CYP4F11Q9HBI6 524 aa12.33□□□□□ -0.44
CDC42BPA-202ENST00000366764 PKD2L2Q9NZM6 624 aa12.33□□□□□ -0.44
CDC42BPA-202ENST00000366764 TMEM132DQ14C87 1099 aa12.33□□□□□ -0.44
CDC42BPA-202ENST00000366764 CALML6Q8TD86 181 aa12.33□□□□□ -0.44
CDC42BPA-202ENST00000366764 AP5M1Q9H0R1 490 aa12.33□□□□□ -0.44
CDC42BPA-202ENST00000366764 TTC36A6NLP5 189 aa12.33□□□□□ -0.44
CDC42BPA-202ENST00000366764 HNRNPRO43390 633 aaKnown RBP12.33□□□□□ -0.44
CDC42BPA-202ENST00000366764 TARSP26639 723 aaKnown RBP12.33□□□□□ -0.44
CDC42BPA-202ENST00000366764 FAM163AQ96GL9 167 aaPredicted RBP12.33□□□□□ -0.44
CDC42BPA-202ENST00000366764 ZDHHC15Q96MV8 337 aa12.33□□□□□ -0.44
CDC42BPA-202ENST00000366764 DCDC2Q9UHG0 476 aa12.33□□□□□ -0.44
CDC42BPA-202ENST00000366764 PCDHA3Q9Y5H8 950 aa12.33□□□□□ -0.44
CDC42BPA-202ENST00000366764 SNX5Q9Y5X3 404 aa12.33□□□□□ -0.44
CDC42BPA-202ENST00000366764 CST8O60676 142 aa12.33□□□□□ -0.44
CDC42BPA-202ENST00000366764 FGRP09769 529 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms