RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 NEBLO76041 1014 aa11□□□□□ -0.65
SMPD4-201ENST00000351288 MUTP22033 750 aa11□□□□□ -0.65
SMPD4-201ENST00000351288 NCKAP1LP55160 1127 aa11□□□□□ -0.65
SMPD4-201ENST00000351288 CCDC121Q6ZUS5 278 aa11□□□□□ -0.65
SMPD4-201ENST00000351288 ARFGAP2Q8N6H7 521 aa11□□□□□ -0.65
SMPD4-201ENST00000351288 KCTD6Q8NC69 237 aa11□□□□□ -0.65
SMPD4-201ENST00000351288 RDM1Q8NG50 284 aa11□□□□□ -0.65
SMPD4-201ENST00000351288 UPF1Q92900 1129 aaKnown RBP eCLIP11□□□□□ -0.651e-11■■■■■ 41.1
SMPD4-201ENST00000351288 TIPINQ9BVW5 301 aa11□□□□□ -0.65
SMPD4-201ENST00000351288 CDC42EP4Q9H3Q1 356 aaKnown RBP11□□□□□ -0.65
SMPD4-201ENST00000351288 ANAPC5Q9UJX4 755 aa11□□□□□ -0.65
SMPD4-201ENST00000351288 DNM1LO00429 736 aa10.99□□□□□ -0.65
SMPD4-201ENST00000351288 TRAPPC3O43617 180 aa10.99□□□□□ -0.65
SMPD4-201ENST00000351288 HBP1O60381 514 aa10.99□□□□□ -0.65
SMPD4-201ENST00000351288 PPFIA2O75334 1257 aa10.99□□□□□ -0.65
SMPD4-201ENST00000351288 STAG3L1P0CL83 205 aa10.99□□□□□ -0.65
SMPD4-201ENST00000351288 CYP2C9P11712 490 aa10.99□□□□□ -0.65
SMPD4-201ENST00000351288 OAZ1P54368 228 aa10.99□□□□□ -0.65
SMPD4-201ENST00000351288 ACAD10Q6JQN1 1059 aa10.99□□□□□ -0.65
SMPD4-201ENST00000351288 CTAGE3PQ8IX95 158 aa10.99□□□□□ -0.65
SMPD4-201ENST00000351288 LRRC34Q8IZ02 419 aa10.99□□□□□ -0.65
SMPD4-201ENST00000351288 REPS2Q8NFH8 660 aa10.99□□□□□ -0.65
SMPD4-201ENST00000351288 ZNF606Q8WXB4 792 aa10.99□□□□□ -0.65
SMPD4-201ENST00000351288 OSBPL7Q9BZF2 842 aa10.99□□□□□ -0.65
SMPD4-201ENST00000351288 CD248Q9HCU0 757 aa10.99□□□□□ -0.65
SMPD4-201ENST00000351288 GINM1Q9NU53 330 aa10.99□□□□□ -0.65
SMPD4-201ENST00000351288 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.99□□□□□ -0.65
SMPD4-201ENST00000351288 SEPT10Q9P0V9 454 aa10.99□□□□□ -0.65
SMPD4-201ENST00000351288 PGAP2Q9UHJ9 254 aa10.99□□□□□ -0.65
SMPD4-201ENST00000351288 ATAD5Q96QE3 1844 aa10.99□□□□□ -0.65
SMPD4-201ENST00000351288 GRIN3BO60391 1043 aa10.99□□□□□ -0.65
SMPD4-201ENST00000351288 BANF1O75531 89 aa10.99□□□□□ -0.65
SMPD4-201ENST00000351288 GARTP22102 1010 aa10.99□□□□□ -0.65
SMPD4-201ENST00000351288 HNRNPH1P31943 449 aaKnown RBP10.99□□□□□ -0.65
SMPD4-201ENST00000351288 CASC4Q6P4E1 433 aa10.99□□□□□ -0.65
SMPD4-201ENST00000351288 KCNV1Q6PIU1 500 aa10.99□□□□□ -0.65
SMPD4-201ENST00000351288 DDX1Q92499 740 aaKnown RBP10.99□□□□□ -0.65
SMPD4-201ENST00000351288 ACAP3Q96P50 834 aa10.99□□□□□ -0.65
SMPD4-201ENST00000351288 APOBEC3GQ9HC16 384 aaKnown RBP10.99□□□□□ -0.65
SMPD4-201ENST00000351288 INTS9Q9NV88 658 aaKnown RBP10.99□□□□□ -0.65
SMPD4-201ENST00000351288 MROH7Q68CQ1 1323 aa10.99□□□□□ -0.65
SMPD4-201ENST00000351288 MIF4GDA9UHW6 222 aaKnown RBP10.99□□□□□ -0.65
SMPD4-201ENST00000351288 RASGRF2O14827 1237 aa10.99□□□□□ -0.65
SMPD4-201ENST00000351288 P4HA1P13674 534 aa10.99□□□□□ -0.65
SMPD4-201ENST00000351288 ATP4AP20648 1035 aa10.99□□□□□ -0.65
SMPD4-201ENST00000351288 CHRNA3P32297 505 aa10.99□□□□□ -0.65
SMPD4-201ENST00000351288 GBP2P32456 591 aaPredicted RBP10.99□□□□□ -0.65
SMPD4-201ENST00000351288 RFC5P40937 340 aa10.99□□□□□ -0.65
SMPD4-201ENST00000351288 ITGA8P53708 1063 aa10.99□□□□□ -0.65
SMPD4-201ENST00000351288 TXNRD3NBQ6F5E7 133 aa10.99□□□□□ -0.65
SMPD4-201ENST00000351288 LRIG3Q6UXM1 1119 aa10.99□□□□□ -0.65
SMPD4-201ENST00000351288 ZBED3Q96IU2 234 aaPredicted RBP10.99□□□□□ -0.65
SMPD4-201ENST00000351288 C17orf75Q9HAS0 396 aa10.99□□□□□ -0.65
SMPD4-201ENST00000351288 HAUS2Q9NVX0 235 aa10.99□□□□□ -0.65
SMPD4-201ENST00000351288 SLC5A4Q9NY91 659 aa10.99□□□□□ -0.65
SMPD4-201ENST00000351288 IKBKGQ9Y6K9 419 aa10.99□□□□□ -0.65
SMPD4-201ENST00000351288 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.98□□□□□ -0.65
SMPD4-201ENST00000351288 M0QZ92 97 aa10.98□□□□□ -0.65
SMPD4-201ENST00000351288 CXCL11O14625 94 aa10.98□□□□□ -0.65
SMPD4-201ENST00000351288 RIPK2O43353 540 aa10.98□□□□□ -0.65
SMPD4-201ENST00000351288 NFICP08651 508 aa10.98□□□□□ -0.65
SMPD4-201ENST00000351288 CETPP11597 493 aa10.98□□□□□ -0.65
SMPD4-201ENST00000351288 NRLP54845 237 aa10.98□□□□□ -0.65
SMPD4-201ENST00000351288 TNFAIP2Q03169 654 aa10.98□□□□□ -0.65
SMPD4-201ENST00000351288 NFIL3Q16649 462 aa10.98□□□□□ -0.65
SMPD4-201ENST00000351288 GNASQ5JWF2 1037 aa10.98□□□□□ -0.65
SMPD4-201ENST00000351288 CCDC13Q8IYE1 715 aa10.98□□□□□ -0.65
SMPD4-201ENST00000351288 TJP2Q9UDY2 1190 aa10.98□□□□□ -0.65
SMPD4-201ENST00000351288 GTF3C4Q9UKN8 822 aa10.98□□□□□ -0.65
SMPD4-201ENST00000351288 A8MXQ7 604 aa10.98□□□□□ -0.65
SMPD4-201ENST00000351288 BTBD19C9JJ37 291 aa10.98□□□□□ -0.65
SMPD4-201ENST00000351288 LGALS2P05162 132 aa10.98□□□□□ -0.65
SMPD4-201ENST00000351288 KRT3P12035 628 aa10.98□□□□□ -0.65
SMPD4-201ENST00000351288 LCP1P13796 627 aa10.98□□□□□ -0.65
SMPD4-201ENST00000351288 SIX1Q15475 284 aaPredicted RBP10.98□□□□□ -0.65
SMPD4-201ENST00000351288 CELF3Q5SZQ8 465 aaKnown RBP10.98□□□□□ -0.65
SMPD4-201ENST00000351288 ACOT1Q86TX2 421 aa10.98□□□□□ -0.65
SMPD4-201ENST00000351288 DNAJB3Q8WWF6 145 aa10.98□□□□□ -0.65
SMPD4-201ENST00000351288 XPO6Q96QU8 1125 aaKnown RBP10.98□□□□□ -0.65
SMPD4-201ENST00000351288 NIF3L1Q9GZT8 377 aa10.98□□□□□ -0.65
SMPD4-201ENST00000351288 C2orf40Q9H1Z8 148 aa10.98□□□□□ -0.65
SMPD4-201ENST00000351288 GPATCH2LQ9NWQ4 482 aa10.98□□□□□ -0.65
SMPD4-201ENST00000351288 PCDHA3Q9Y5H8 950 aa10.98□□□□□ -0.65
SMPD4-201ENST00000351288 KIAA1217Q5T5P2 1943 aa10.98□□□□□ -0.65
SMPD4-201ENST00000351288 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.98□□□□□ -0.65
SMPD4-201ENST00000351288 CAPN9O14815 690 aa10.98□□□□□ -0.65
SMPD4-201ENST00000351288 CLTAP09496 248 aa10.98□□□□□ -0.65
SMPD4-201ENST00000351288 TMEM132DQ14C87 1099 aa10.98□□□□□ -0.65
SMPD4-201ENST00000351288 HADHQ16836 314 aaKnown RBP10.98□□□□□ -0.65
SMPD4-201ENST00000351288 CLEC16AQ2KHT3 1053 aa10.98□□□□□ -0.65
SMPD4-201ENST00000351288 BBS9Q3SYG4 887 aa10.98□□□□□ -0.65
SMPD4-201ENST00000351288 C11orf63Q6NUN7 778 aa10.98□□□□□ -0.65
SMPD4-201ENST00000351288 C1orf228Q6PIY5 440 aa10.98□□□□□ -0.65
SMPD4-201ENST00000351288 MCOLN2Q8IZK6 566 aa10.98□□□□□ -0.65
SMPD4-201ENST00000351288 CACNA2D3Q8IZS8 1091 aa10.98□□□□□ -0.65
SMPD4-201ENST00000351288 NETO2Q8NC67 525 aa10.98□□□□□ -0.65
SMPD4-201ENST00000351288 CD101Q93033 1021 aa10.98□□□□□ -0.65
SMPD4-201ENST00000351288 HPDLQ96IR7 371 aa10.98□□□□□ -0.65
SMPD4-201ENST00000351288 WNT8AQ9H1J5 351 aa10.98□□□□□ -0.65
SMPD4-201ENST00000351288 TIMM13Q9Y5L4 95 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms