RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 RIT2Q99578 217 aa24.13■■□□□ 1.45
NPAS3-201ENST00000346562 KCNQ2O43526 872 aa24.12■■□□□ 1.45
NPAS3-201ENST00000346562 RHOBTB1O94844 696 aa24.12■■□□□ 1.45
NPAS3-201ENST00000346562 KCNK10P57789 538 aa24.12■■□□□ 1.45
NPAS3-201ENST00000346562 PTK7Q13308 1070 aa24.12■■□□□ 1.45
NPAS3-201ENST00000346562 COPG1Q9Y678 874 aaKnown RBP24.12■■□□□ 1.45
NPAS3-201ENST00000346562 ABCC3O15438 1527 aa24.12■■□□□ 1.45
NPAS3-201ENST00000346562 TCP11X1B4DZS4 312 aa24.12■■□□□ 1.45
NPAS3-201ENST00000346562 P4HA2O15460 535 aa24.12■■□□□ 1.45
NPAS3-201ENST00000346562 DEPDC1Q5TB30 811 aa24.12■■□□□ 1.45
NPAS3-201ENST00000346562 PLD3Q8IV08 490 aa24.12■■□□□ 1.45
NPAS3-201ENST00000346562 RDM1Q8NG50 284 aa24.12■■□□□ 1.45
NPAS3-201ENST00000346562 OSBPL1AQ9BXW6 950 aa24.12■■□□□ 1.45
NPAS3-201ENST00000346562 ALDH7A1P49419 539 aaKnown RBP24.12■■□□□ 1.45
NPAS3-201ENST00000346562 PCYT1AP49585 367 aa24.12■■□□□ 1.45
NPAS3-201ENST00000346562 GALCP54803 685 aa24.12■■□□□ 1.45
NPAS3-201ENST00000346562 RFX8Q6ZV50 586 aa24.12■■□□□ 1.45
NPAS3-201ENST00000346562 GUCY1A2P33402 732 aa24.12■■□□□ 1.45
NPAS3-201ENST00000346562 PLA2G4FQ68DD2 849 aa24.12■■□□□ 1.45
NPAS3-201ENST00000346562 POTEAQ6S8J7 498 aa24.12■■□□□ 1.45
NPAS3-201ENST00000346562 SNX12Q9UMY4 172 aa24.12■■□□□ 1.45
NPAS3-201ENST00000346562 SSU72P8A0A1W2PR75 194 aa24.11■■□□□ 1.45
NPAS3-201ENST00000346562 PSMD14O00487 310 aa24.11■■□□□ 1.45
NPAS3-201ENST00000346562 DEAF1O75398 565 aaPredicted RBP24.11■■□□□ 1.45
NPAS3-201ENST00000346562 CENPCQ03188 943 aa24.11■■□□□ 1.45
NPAS3-201ENST00000346562 CNGA3Q16281 694 aa24.11■■□□□ 1.45
NPAS3-201ENST00000346562 AASDHQ4L235 1098 aaPredicted RBP24.11■■□□□ 1.45
NPAS3-201ENST00000346562 STYK1Q6J9G0 422 aa24.11■■□□□ 1.45
NPAS3-201ENST00000346562 KCNK16Q96T55 309 aa24.11■■□□□ 1.45
NPAS3-201ENST00000346562 DNAJC7Q99615 494 aa24.11■■□□□ 1.45
NPAS3-201ENST00000346562 ZSCAN32Q9NX65 697 aa24.11■■□□□ 1.45
NPAS3-201ENST00000346562 FOXN1O15353 648 aa24.11■■□□□ 1.45
NPAS3-201ENST00000346562 KLHL2O95198 593 aa24.11■■□□□ 1.45
NPAS3-201ENST00000346562 SRGNP10124 158 aa24.11■■□□□ 1.45
NPAS3-201ENST00000346562 NCAM1P13591 858 aa24.11■■□□□ 1.45
NPAS3-201ENST00000346562 SLC11A2P49281 568 aa24.11■■□□□ 1.45
NPAS3-201ENST00000346562 EDRF1Q3B7T1 1238 aa24.11■■□□□ 1.45
NPAS3-201ENST00000346562 MYOZ2Q9NPC6 264 aa24.11■■□□□ 1.45
NPAS3-201ENST00000346562 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.11■■□□□ 1.45
NPAS3-201ENST00000346562 ITIH6Q6UXX5 1313 aa24.11■■□□□ 1.45
NPAS3-201ENST00000346562 EGFRP00533 1210 aa24.11■■□□□ 1.45
NPAS3-201ENST00000346562 UCHL3P15374 230 aa24.11■■□□□ 1.45
NPAS3-201ENST00000346562 RGS2P41220 211 aa24.11■■□□□ 1.45
NPAS3-201ENST00000346562 NPEPPSP55786 919 aa24.11■■□□□ 1.45
NPAS3-201ENST00000346562 MDH1BQ5I0G3 518 aa24.11■■□□□ 1.45
NPAS3-201ENST00000346562 RBBP8Q99708 897 aa24.11■■□□□ 1.45
NPAS3-201ENST00000346562 PCDHB2Q9Y5E7 798 aa24.11■■□□□ 1.45
NPAS3-201ENST00000346562 CHRM3P20309 590 aa24.11■■□□□ 1.45
NPAS3-201ENST00000346562 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.11■■□□□ 1.45
NPAS3-201ENST00000346562 SPACA6W5XKT8 324 aa24.11■■□□□ 1.45
NPAS3-201ENST00000346562 RASSF10A6NK89 507 aa24.11■■□□□ 1.45
NPAS3-201ENST00000346562 CENPAP49450 140 aa24.11■■□□□ 1.45
NPAS3-201ENST00000346562 TRIM28Q13263 835 aaKnown RBP24.11■■□□□ 1.45
NPAS3-201ENST00000346562 ADCY10Q96PN6 1610 aa24.11■■□□□ 1.45
NPAS3-201ENST00000346562 RHOBTB3O94955 611 aa24.1■■□□□ 1.45
NPAS3-201ENST00000346562 MLNP12872 115 aa24.1■■□□□ 1.45
NPAS3-201ENST00000346562 PRR5LQ6MZQ0 368 aa24.1■■□□□ 1.45
NPAS3-201ENST00000346562 KRCC1Q9NPI7 259 aaPredicted RBP24.1■■□□□ 1.45
NPAS3-201ENST00000346562 METTL5Q9NRN9 209 aaKnown RBP24.1■■□□□ 1.45
NPAS3-201ENST00000346562 CAMSAP3Q9P1Y5 1249 aaPredicted RBP24.1■■□□□ 1.45
NPAS3-201ENST00000346562 PREX2Q70Z35 1606 aa24.1■■□□□ 1.45
NPAS3-201ENST00000346562 PRR23D1E9PI22 279 aaPredicted RBP24.1■■□□□ 1.45
NPAS3-201ENST00000346562 PRR23D2P0DMB1 279 aaPredicted RBP24.1■■□□□ 1.45
NPAS3-201ENST00000346562 VCAM1P19320 739 aa24.1■■□□□ 1.45
NPAS3-201ENST00000346562 DPYDQ12882 1025 aa24.1■■□□□ 1.45
NPAS3-201ENST00000346562 TSGA10IPQ3SY00 556 aa24.1■■□□□ 1.45
NPAS3-201ENST00000346562 ADSSL1Q8N142 457 aa24.1■■□□□ 1.45
NPAS3-201ENST00000346562 RSPH10B2B2RC85 870 aa24.1■■□□□ 1.45
NPAS3-201ENST00000346562 GAS2O43903 313 aaKnown RBP24.1■■□□□ 1.45
NPAS3-201ENST00000346562 CDH16O75309 829 aa24.1■■□□□ 1.45
NPAS3-201ENST00000346562 DAB1O75553 588 aa24.1■■□□□ 1.45
NPAS3-201ENST00000346562 CELF2O95319 508 aaKnown RBP24.1■■□□□ 1.45
NPAS3-201ENST00000346562 RSPH10BP0C881 870 aa24.1■■□□□ 1.45
NPAS3-201ENST00000346562 S100A5P33763 92 aa24.1■■□□□ 1.45
NPAS3-201ENST00000346562 HUNKP57058 714 aa24.1■■□□□ 1.45
NPAS3-201ENST00000346562 TTLL9Q3SXZ7 439 aa24.1■■□□□ 1.45
NPAS3-201ENST00000346562 STAMBPL1Q96FJ0 436 aa24.1■■□□□ 1.45
NPAS3-201ENST00000346562 ANKEF1Q9NU02 776 aa24.1■■□□□ 1.45
NPAS3-201ENST00000346562 ATP11BQ9Y2G3 1177 aa24.1■■□□□ 1.45
NPAS3-201ENST00000346562 PLA2R1Q13018 1463 aa24.1■■□□□ 1.45
NPAS3-201ENST00000346562 GRAP2O75791 330 aa24.1■■□□□ 1.45
NPAS3-201ENST00000346562 ANXA9O76027 345 aa24.1■■□□□ 1.45
NPAS3-201ENST00000346562 CYP2C8P10632 490 aa24.1■■□□□ 1.45
NPAS3-201ENST00000346562 ENO3P13929 434 aaPredicted RBP24.1■■□□□ 1.45
NPAS3-201ENST00000346562 TRPC1P48995 793 aa24.1■■□□□ 1.45
NPAS3-201ENST00000346562 RABGAP1LQ5R372 815 aa24.1■■□□□ 1.45
NPAS3-201ENST00000346562 UCMAQ8WVF2 138 aa24.1■■□□□ 1.45
NPAS3-201ENST00000346562 HPDLQ96IR7 371 aa24.1■■□□□ 1.45
NPAS3-201ENST00000346562 BRD8Q9H0E9 1235 aa24.1■■□□□ 1.45
NPAS3-201ENST00000346562 TET3O43151 1660 aa24.1■■□□□ 1.45
NPAS3-201ENST00000346562 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP24.09■■□□□ 1.45
NPAS3-201ENST00000346562 GTF2A2P52657 109 aa24.09■■□□□ 1.45
NPAS3-201ENST00000346562 NCKAP1LP55160 1127 aa24.09■■□□□ 1.45
NPAS3-201ENST00000346562 HNRNPH2P55795 449 aaKnown RBP24.09■■□□□ 1.45
NPAS3-201ENST00000346562 ZNF177Q13360 481 aaPredicted RBP24.09■■□□□ 1.45
NPAS3-201ENST00000346562 E4F1Q66K89 784 aaPredicted RBP24.09■■□□□ 1.45
NPAS3-201ENST00000346562 GPAT2Q6NUI2 795 aa24.09■■□□□ 1.45
NPAS3-201ENST00000346562 ANKRD13AQ8IZ07 590 aa24.09■■□□□ 1.45
NPAS3-201ENST00000346562 SLC25A13Q9UJS0 675 aa24.09■■□□□ 1.45
NPAS3-201ENST00000346562 ZNF229Q9UJW7 825 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms