RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 NSMCE3Q96MG7 304 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 ADNPQ9H2P0 1102 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 A0A087WXM4 84 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 SYN2Q92777 582 aaPredicted RBP3.93□□□□□ -1.78
SYNE2-202ENST00000344113 ZNF274Q96GC6 653 aaPredicted RBP3.93□□□□□ -1.78
SYNE2-202ENST00000344113 SURF6O75683 361 aaKnown RBP3.93□□□□□ -1.78
SYNE2-202ENST00000344113 SFTPCP11686 197 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 CKBP12277 381 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 GDI2P50395 445 aaKnown RBP3.93□□□□□ -1.78
SYNE2-202ENST00000344113 CPXCR1Q8N123 301 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 RMND5BQ96G75 393 aaPredicted RBP3.93□□□□□ -1.78
SYNE2-202ENST00000344113 PHB2Q99623 299 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 CHID1Q9BWS9 393 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 SNX25Q9H3E2 840 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 RUBCNLQ9H714 662 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 RTEL1Q9NZ71 1219 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 JCADQ9P266 1359 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 EML1O00423 815 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 MAP3K6O95382 1288 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 EIF4BP23588 611 aaKnown RBP3.93□□□□□ -1.78
SYNE2-202ENST00000344113 UBXN2AP68543 259 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 NEK5Q6P3R8 708 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 AACSQ86V21 672 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 TTC30AQ86WT1 665 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 ZCCHC7Q8N3Z6 543 aaKnown RBP3.93□□□□□ -1.78
SYNE2-202ENST00000344113 HIPK4Q8NE63 616 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 APPL2Q8NEU8 664 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 AENQ8WTP8 325 aaKnown RBP3.93□□□□□ -1.78
SYNE2-202ENST00000344113 SNX19Q92543 992 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 C7orf34Q96L11 122 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 CD248Q9HCU0 757 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 NLRC4Q9NPP4 1024 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 PCDHB15Q9Y5E8 787 aa3.93□□□□□ -1.78
SYNE2-202ENST00000344113 ERBB3P21860 1342 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 PGRMC1O00264 195 aaKnown RBP3.92□□□□□ -1.78
SYNE2-202ENST00000344113 HSF2Q03933 536 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 C2CD6Q53TS8 623 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 DHX32Q7L7V1 743 aaKnown RBP3.92□□□□□ -1.78
SYNE2-202ENST00000344113 BPHLQ86WA6 291 aaPredicted RBP3.92□□□□□ -1.78
SYNE2-202ENST00000344113 ARMC5Q96C12 935 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 KLHL3Q9UH77 587 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 DTNAQ9Y4J8 743 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 TKTP29401 623 aaKnown RBP3.92□□□□□ -1.78
SYNE2-202ENST00000344113 RSBN1Q5VWQ0 802 aaPredicted RBP3.92□□□□□ -1.78
SYNE2-202ENST00000344113 PCYOX1LQ8NBM8 494 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 SMAD5Q99717 465 aaKnown RBP3.92□□□□□ -1.78
SYNE2-202ENST00000344113 THTPAQ9BU02 230 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 XPO4Q9C0E2 1151 aaKnown RBP3.92□□□□□ -1.78
SYNE2-202ENST00000344113 KCNK13Q9HB14 408 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 CNOT11Q9UKZ1 510 aaKnown RBP3.92□□□□□ -1.78
SYNE2-202ENST00000344113 GNGT2O14610 69 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 POLR2BP30876 1174 aaKnown RBP3.92□□□□□ -1.78
SYNE2-202ENST00000344113 STAT5AP42229 794 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 MAGEA2P43356 314 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 STAT5BP51692 787 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 FAM199XQ6PEV8 388 aaPredicted RBP3.92□□□□□ -1.78
SYNE2-202ENST00000344113 DNAJC14Q6Y2X3 702 aaPredicted RBP3.92□□□□□ -1.78
SYNE2-202ENST00000344113 SH3BP5LQ7L8J4 393 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 ZNF75CPQ92670 426 aaPredicted RBP3.92□□□□□ -1.78
SYNE2-202ENST00000344113 RHBDF1Q96CC6 855 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 ZNF496Q96IT1 587 aaPredicted RBP3.92□□□□□ -1.78
SYNE2-202ENST00000344113 PPP1R10Q96QC0 940 aaKnown RBP3.92□□□□□ -1.78
SYNE2-202ENST00000344113 ZMYND12Q9H0C1 365 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 KCNF1Q9H3M0 494 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 AKAP7Q9P0M2 348 aaPredicted RBP3.92□□□□□ -1.78
SYNE2-202ENST00000344113 ATP10AO60312 1499 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 STK36Q9NRP7 1315 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 PDGFRBP09619 1106 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 ABCE1P61221 599 aaKnown RBP3.92□□□□□ -1.78
SYNE2-202ENST00000344113 PAK1Q13153 545 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 SLC45A4Q5BKX6 768 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 ANKRD26P1Q6NSI1 321 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 HEXDCQ8WVB3 486 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 TSSK1BQ9BXA7 367 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 SETD4Q9NVD3 440 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 SAMM50Q9Y512 469 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 H7C2Y5 167 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 KPNA5O15131 536 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 DLGAP3O95886 979 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 ZNF23P17027 643 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 PROZP22891 400 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 IDUAP35475 653 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 RAB44Q7Z6P3 723 aaPredicted RBP3.92□□□□□ -1.78
SYNE2-202ENST00000344113 VTA1Q9NP79 307 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 ERAP1Q9NZ08 941 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 ST14Q9Y5Y6 855 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 ARHGEF35A5YM69 484 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 STX16-NPEPL1H3BU86 382 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 SPTLC2O15270 562 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 ZBED6P86452 979 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 KLHL38Q2WGJ6 581 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 AOPEPQ8N6M6 819 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 REXO5Q96IC2 774 aaKnown RBP3.92□□□□□ -1.78
SYNE2-202ENST00000344113 EFCAB6Q5THR3 1501 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 GATCO43716 136 aaKnown RBP3.92□□□□□ -1.78
SYNE2-202ENST00000344113 NMT2O60551 498 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 ILF3Q12906 894 aaKnown RBP eCLIP3.92□□□□□ -1.78
SYNE2-202ENST00000344113 WDR44Q5JSH3 913 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 DLG3Q92796 817 aa3.92□□□□□ -1.78
SYNE2-202ENST00000344113 ZNF594Q96JF6 807 aaPredicted RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms