RNA–Protein interactions for RNA: ENST00000343017.11

SNX18-202, Transcript of sorting nexin 18, humanhuman

BASIC

Gene SNX18, Length 3,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18-202ENST00000343017 TSSK1BQ9BXA7 367 aa16.07■□□□□ 0.16
SNX18-202ENST00000343017 CLIC5Q9NZA1 410 aa16.07■□□□□ 0.16
SNX18-202ENST00000343017 PHF24Q9UPV7 400 aa16.07■□□□□ 0.16
SNX18-202ENST00000343017 MYH11P35749 1972 aa16.06■□□□□ 0.16
SNX18-202ENST00000343017 E5RJQ4 531 aa16.06■□□□□ 0.16
SNX18-202ENST00000343017 GRIN3BO60391 1043 aa16.06■□□□□ 0.16
SNX18-202ENST00000343017 KRT5P13647 590 aa16.06■□□□□ 0.16
SNX18-202ENST00000343017 ARSEP51690 589 aa16.06■□□□□ 0.16
SNX18-202ENST00000343017 KLF1Q13351 362 aaPredicted RBP16.06■□□□□ 0.16
SNX18-202ENST00000343017 PANX3Q96QZ0 392 aa16.06■□□□□ 0.16
SNX18-202ENST00000343017 OSBPL8Q9BZF1 889 aa16.06■□□□□ 0.16
SNX18-202ENST00000343017 VCX3BQ9H321 246 aa16.06■□□□□ 0.16
SNX18-202ENST00000343017 ZNF395Q9H8N7 513 aaPredicted RBP16.06■□□□□ 0.16
SNX18-202ENST00000343017 VCX3AQ9NNX9 186 aa16.06■□□□□ 0.16
SNX18-202ENST00000343017 TOPORSQ9NS56 1045 aaPredicted RBP16.06■□□□□ 0.16
SNX18-202ENST00000343017 IGKV6D-41A0A0C4DH26 115 aa16.06■□□□□ 0.16
SNX18-202ENST00000343017 IFNB1P01574 187 aa16.06■□□□□ 0.16
SNX18-202ENST00000343017 ABHD2P08910 425 aa16.06■□□□□ 0.16
SNX18-202ENST00000343017 BGNP21810 368 aa16.06■□□□□ 0.16
SNX18-202ENST00000343017 GPX6P59796 221 aa16.06■□□□□ 0.16
SNX18-202ENST00000343017 DSG1Q02413 1049 aa16.06■□□□□ 0.16
SNX18-202ENST00000343017 CETN1Q12798 172 aa16.06■□□□□ 0.16
SNX18-202ENST00000343017 MFSD14BQ5SR56 506 aa16.06■□□□□ 0.16
SNX18-202ENST00000343017 ACAD10Q6JQN1 1059 aa16.06■□□□□ 0.16
SNX18-202ENST00000343017 CCDC62Q6P9F0 684 aa16.06■□□□□ 0.16
SNX18-202ENST00000343017 RAPH1Q70E73 1250 aa16.06■□□□□ 0.16
SNX18-202ENST00000343017 TTC17Q96AE7 1141 aa16.06■□□□□ 0.16
SNX18-202ENST00000343017 SKA1Q96BD8 255 aa16.06■□□□□ 0.16
SNX18-202ENST00000343017 ACSF2Q96CM8 615 aaPredicted RBP16.06■□□□□ 0.16
SNX18-202ENST00000343017 ATXN10Q9UBB4 475 aa16.06■□□□□ 0.16
SNX18-202ENST00000343017 WNK3Q9BYP7 1800 aa16.06■□□□□ 0.16
SNX18-202ENST00000343017 HARSP12081 509 aaKnown RBP16.05■□□□□ 0.16
SNX18-202ENST00000343017 CDK16Q00536 496 aa16.05■□□□□ 0.16
SNX18-202ENST00000343017 CDC16Q13042 620 aa16.05■□□□□ 0.16
SNX18-202ENST00000343017 LSAMPQ13449 338 aa16.05■□□□□ 0.16
SNX18-202ENST00000343017 RBM15BQ8NDT2 890 aaKnown RBP16.05■□□□□ 0.16
SNX18-202ENST00000343017 PI4K2AQ9BTU6 479 aa16.05■□□□□ 0.16
SNX18-202ENST00000343017 TAF1LQ8IZX4 1826 aa16.05■□□□□ 0.16
SNX18-202ENST00000343017 C10orf71Q711Q0 1435 aa16.05■□□□□ 0.16
SNX18-202ENST00000343017 K7ENM7 598 aa16.05■□□□□ 0.16
SNX18-202ENST00000343017 TCF4P15884 667 aa16.05■□□□□ 0.16
SNX18-202ENST00000343017 MAN1A1P33908 653 aa16.05■□□□□ 0.16
SNX18-202ENST00000343017 MXI1P50539 228 aa16.05■□□□□ 0.16
SNX18-202ENST00000343017 CDK7P50613 346 aa16.05■□□□□ 0.16
SNX18-202ENST00000343017 RASA2Q15283 850 aa16.05■□□□□ 0.16
SNX18-202ENST00000343017 CCNG2Q16589 344 aa16.05■□□□□ 0.16
SNX18-202ENST00000343017 Q4G0T1 1027 aa16.05■□□□□ 0.16
SNX18-202ENST00000343017 SATL1Q86VE3 508 aa16.05■□□□□ 0.16
SNX18-202ENST00000343017 NR1H4Q96RI1 486 aaPredicted RBP16.05■□□□□ 0.16
SNX18-202ENST00000343017 POLR3CQ9BUI4 534 aaPredicted RBP16.05■□□□□ 0.16
SNX18-202ENST00000343017 DDX43Q9NXZ2 648 aaKnown RBP16.05■□□□□ 0.16
SNX18-202ENST00000343017 CYP3A4P08684 503 aa16.05■□□□□ 0.16
SNX18-202ENST00000343017 GPATCH4Q5T3I0 446 aaKnown RBP16.05■□□□□ 0.16
SNX18-202ENST00000343017 RELL1Q8IUW5 271 aa16.05■□□□□ 0.16
SNX18-202ENST00000343017 TTC25Q96NG3 672 aa16.05■□□□□ 0.16
SNX18-202ENST00000343017 PSMC3IPQ9P2W1 217 aaPredicted RBP16.05■□□□□ 0.16
SNX18-202ENST00000343017 DLDP09622 509 aaKnown RBP16.04■□□□□ 0.16
SNX18-202ENST00000343017 GABPAQ06546 454 aa16.04■□□□□ 0.16
SNX18-202ENST00000343017 IKQ13123 557 aaPredicted RBP16.04■□□□□ 0.16
SNX18-202ENST00000343017 LPCAT4Q643R3 524 aa16.04■□□□□ 0.16
SNX18-202ENST00000343017 DAW1Q8N136 415 aa16.04■□□□□ 0.16
SNX18-202ENST00000343017 DDX1Q92499 740 aaKnown RBP16.04■□□□□ 0.16
SNX18-202ENST00000343017 FAM20AQ96MK3 541 aa16.04■□□□□ 0.16
SNX18-202ENST00000343017 TMEM165Q9HC07 324 aa16.04■□□□□ 0.16
SNX18-202ENST00000343017 STK32BQ9NY57 414 aa16.04■□□□□ 0.16
SNX18-202ENST00000343017 DNALI1O14645 258 aaPredicted RBP16.04■□□□□ 0.16
SNX18-202ENST00000343017 HNRNPCL1O60812 293 aaKnown RBP16.04■□□□□ 0.16
SNX18-202ENST00000343017 ATF7P17544 494 aaPredicted RBP16.04■□□□□ 0.16
SNX18-202ENST00000343017 GPSM2P81274 684 aa16.04■□□□□ 0.16
SNX18-202ENST00000343017 TTLL12Q14166 644 aaPredicted RBP16.04■□□□□ 0.16
SNX18-202ENST00000343017 NFIL3Q16649 462 aa16.04■□□□□ 0.16
SNX18-202ENST00000343017 GSTA3Q16772 222 aa16.04■□□□□ 0.16
SNX18-202ENST00000343017 MSS51Q4VC12 460 aa16.04■□□□□ 0.16
SNX18-202ENST00000343017 MARK2Q7KZI7 788 aaKnown RBP16.04■□□□□ 0.16
SNX18-202ENST00000343017 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.04■□□□□ 0.16
SNX18-202ENST00000343017 SESTD1Q86VW0 696 aa16.04■□□□□ 0.16
SNX18-202ENST00000343017 TDRPQ86YL5 185 aa16.04■□□□□ 0.16
SNX18-202ENST00000343017 NCSTNQ92542 709 aa16.04■□□□□ 0.16
SNX18-202ENST00000343017 OXNAD1Q96HP4 312 aaPredicted RBP16.04■□□□□ 0.16
SNX18-202ENST00000343017 HIC2Q96JB3 615 aa16.04■□□□□ 0.16
SNX18-202ENST00000343017 FAM111AQ96PZ2 611 aa16.04■□□□□ 0.16
SNX18-202ENST00000343017 NDE1Q9NXR1 346 aa16.04■□□□□ 0.16
SNX18-202ENST00000343017 ANGPTL2Q9UKU9 493 aa16.04■□□□□ 0.16
SNX18-202ENST00000343017 PGM3O95394 542 aa16.03■□□□□ 0.16
SNX18-202ENST00000343017 APBA3O96018 575 aa16.03■□□□□ 0.16
SNX18-202ENST00000343017 ADRB2P07550 413 aa16.03■□□□□ 0.16
SNX18-202ENST00000343017 CFHP08603 1231 aa16.03■□□□□ 0.16
SNX18-202ENST00000343017 KITP10721 976 aa16.03■□□□□ 0.16
SNX18-202ENST00000343017 RFX1P22670 979 aa16.03■□□□□ 0.16
SNX18-202ENST00000343017 CENPCQ03188 943 aa16.03■□□□□ 0.16
SNX18-202ENST00000343017 GRAPQ13588 217 aa16.03■□□□□ 0.16
SNX18-202ENST00000343017 SLC15A2Q16348 729 aa16.03■□□□□ 0.16
SNX18-202ENST00000343017 SPDYAQ5MJ70 313 aa16.03■□□□□ 0.16
SNX18-202ENST00000343017 OTOP1Q7RTM1 612 aa16.03■□□□□ 0.16
SNX18-202ENST00000343017 PASD1Q8IV76 773 aa16.03■□□□□ 0.16
SNX18-202ENST00000343017 BBOF1Q8ND07 529 aa16.03■□□□□ 0.16
SNX18-202ENST00000343017 GRAPLQ8TC17 118 aaPredicted RBP16.03■□□□□ 0.16
SNX18-202ENST00000343017 PYDC1Q8WXC3 89 aa16.03■□□□□ 0.16
SNX18-202ENST00000343017 SHC3Q92529 594 aa16.03■□□□□ 0.16
SNX18-202ENST00000343017 WDR18Q9BV38 432 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms