RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 OSBPL8Q9BZF1 889 aa21.31■■□□□ 1
SPG7-202ENST00000341316 FZD8Q9H461 694 aa21.31■■□□□ 1
SPG7-202ENST00000341316 PI4K2BG5E9Z4 385 aa21.3■■□□□ 1
SPG7-202ENST00000341316 INO80B-WBP1J3KQ70 363 aa21.3■■□□□ 1
SPG7-202ENST00000341316 TXNP10599 105 aaKnown RBP21.3■■□□□ 1
SPG7-202ENST00000341316 ASPAP45381 313 aa21.3■■□□□ 1
SPG7-202ENST00000341316 VPS41P49754 854 aa21.3■■□□□ 1
SPG7-202ENST00000341316 CDR1P51861 262 aa21.3■■□□□ 1
SPG7-202ENST00000341316 ERMARDQ5T6L9 678 aa21.3■■□□□ 1
SPG7-202ENST00000341316 GPAT2Q6NUI2 795 aa21.3■■□□□ 1
SPG7-202ENST00000341316 CHADLQ6NUI6 762 aa21.3■■□□□ 1
SPG7-202ENST00000341316 PRUNE1Q86TP1 453 aa21.3■■□□□ 1
SPG7-202ENST00000341316 PWWP2AQ96N64 755 aa21.3■■□□□ 1
SPG7-202ENST00000341316 FAM129AQ9BZQ8 928 aa21.3■■□□□ 1
SPG7-202ENST00000341316 INO80BQ9C086 356 aaPredicted RBP21.3■■□□□ 1
SPG7-202ENST00000341316 CDC42EP4Q9H3Q1 356 aaKnown RBP21.3■■□□□ 1
SPG7-202ENST00000341316 RNPEPQ9H4A4 650 aa21.3■■□□□ 1
SPG7-202ENST00000341316 RNF181Q9P0P0 153 aa21.3■■□□□ 1
SPG7-202ENST00000341316 ACKR2O00590 384 aa21.3■■□□□ 1
SPG7-202ENST00000341316 ITGA8P53708 1063 aa21.3■■□□□ 1
SPG7-202ENST00000341316 TRPC3Q13507 836 aa21.3■■□□□ 1
SPG7-202ENST00000341316 TTLL12Q14166 644 aaPredicted RBP21.3■■□□□ 1
SPG7-202ENST00000341316 EFCAB12Q6NXP0 572 aa21.3■■□□□ 1
SPG7-202ENST00000341316 ATL2Q8NHH9 583 aa21.3■■□□□ 1
SPG7-202ENST00000341316 EXD1Q8NHP7 514 aa21.3■■□□□ 1
SPG7-202ENST00000341316 OPTNQ96CV9 577 aa21.3■■□□□ 1
SPG7-202ENST00000341316 SNF8Q96H20 258 aa21.3■■□□□ 1
SPG7-202ENST00000341316 MCEEQ96PE7 176 aa21.3■■□□□ 1
SPG7-202ENST00000341316 C2orf40Q9H1Z8 148 aa21.3■■□□□ 1
SPG7-202ENST00000341316 ADAM7Q9H2U9 754 aa21.3■■□□□ 1
SPG7-202ENST00000341316 DNAJC17Q9NVM6 304 aaKnown RBP21.3■■□□□ 1
SPG7-202ENST00000341316 POLIQ9UNA4 740 aa21.3■■□□□ 1
SPG7-202ENST00000341316 F8VP50 259 aa21.29■■□□□ 1
SPG7-202ENST00000341316 CSDE1O75534 798 aaKnown RBP21.29■■□□□ 1
SPG7-202ENST00000341316 KRT10P13645 584 aa21.29■■□□□ 1
SPG7-202ENST00000341316 ITIH2P19823 946 aa21.29■■□□□ 1
SPG7-202ENST00000341316 MAN1A1P33908 653 aa21.29■■□□□ 1
SPG7-202ENST00000341316 MBTD1Q05BQ5 628 aa21.29■■□□□ 1
SPG7-202ENST00000341316 ZNF699Q32M78 642 aa21.29■■□□□ 1
SPG7-202ENST00000341316 GJC2Q5T442 439 aaPredicted RBP21.29■■□□□ 1
SPG7-202ENST00000341316 CHMP6Q96FZ7 201 aa21.29■■□□□ 1
SPG7-202ENST00000341316 MPHOSPH6Q99547 160 aaKnown RBP21.29■■□□□ 1
SPG7-202ENST00000341316 SELENOSQ9BQE4 189 aa21.29■■□□□ 1
SPG7-202ENST00000341316 TMEM109Q9BVC6 243 aa21.29■■□□□ 1
SPG7-202ENST00000341316 CD248Q9HCU0 757 aa21.29■■□□□ 1
SPG7-202ENST00000341316 IP6K2Q9UHH9 426 aa21.29■■□□□ 1
SPG7-202ENST00000341316 MCM3APO60318 1980 aa21.29■■□□□ 1
SPG7-202ENST00000341316 ATP2C2O75185 946 aa21.29■■□□□ 1
SPG7-202ENST00000341316 CHN1P15882 459 aa21.29■■□□□ 1
SPG7-202ENST00000341316 PPIL2Q13356 520 aa21.29■■□□□ 1
SPG7-202ENST00000341316 CCNG2Q16589 344 aa21.29■■□□□ 1
SPG7-202ENST00000341316 TXNRD3NBQ6F5E7 133 aa21.29■■□□□ 1
SPG7-202ENST00000341316 SYDE1Q6ZW31 735 aaPredicted RBP21.29■■□□□ 1
SPG7-202ENST00000341316 RGS16O15492 202 aaPredicted RBP21.28■■□□□ 1
SPG7-202ENST00000341316 ITGBL1O95965 494 aaPredicted RBP21.28■■□□□ 1
SPG7-202ENST00000341316 CXCL8P10145 99 aa21.28■■□□□ 1
SPG7-202ENST00000341316 RAP1GAPP47736 663 aa21.28■■□□□ 1
SPG7-202ENST00000341316 CYP4A22Q5TCH4 519 aa21.28■■□□□ 1
SPG7-202ENST00000341316 CCDC91Q7Z6B0 441 aa21.28■■□□□ 1
SPG7-202ENST00000341316 GRK7Q8WTQ7 553 aa21.28■■□□□ 1
SPG7-202ENST00000341316 CENPTQ96BT3 561 aa21.28■■□□□ 1
SPG7-202ENST00000341316 CDT1Q9H211 546 aa21.28■■□□□ 1
SPG7-202ENST00000341316 SMARCAD1Q9H4L7 1026 aa21.28■■□□□ 1
SPG7-202ENST00000341316 NXF1Q9UBU9 619 aaKnown RBP21.28■■□□□ 1
SPG7-202ENST00000341316 IVNS1ABPQ9Y6Y0 642 aa21.28■■□□□ 1
SPG7-202ENST00000341316 B4GALT4O60513 344 aa21.27■■□□□ 1
SPG7-202ENST00000341316 ACSL3O95573 720 aa21.27■■□□□ 1
SPG7-202ENST00000341316 LSM8O95777 96 aaKnown RBP21.27■■□□□ 1
SPG7-202ENST00000341316 GAS8O95995 478 aa21.27■■□□□ 1
SPG7-202ENST00000341316 ADCY8P40145 1251 aa21.27■■□□□ 1
SPG7-202ENST00000341316 NFX1Q12986 1120 aaKnown RBP21.27■■□□□ 1
SPG7-202ENST00000341316 PPP1R15BQ5SWA1 713 aa21.27■■□□□ 1
SPG7-202ENST00000341316 C6orf118Q5T5N4 469 aa21.27■■□□□ 1
SPG7-202ENST00000341316 GPR25O00155 361 aa21.27■■□□□ 1
SPG7-202ENST00000341316 ATF2P15336 505 aa21.27■■□□□ 1
SPG7-202ENST00000341316 MMP13P45452 471 aa21.27■■□□□ 1
SPG7-202ENST00000341316 SCTRP47872 440 aa21.27■■□□□ 1
SPG7-202ENST00000341316 IGBP1P78318 339 aa21.27■■□□□ 1
SPG7-202ENST00000341316 AUHQ13825 339 aaKnown RBP21.27■■□□□ 1
SPG7-202ENST00000341316 SURF1Q15526 300 aa21.27■■□□□ 1
SPG7-202ENST00000341316 TNFAIP8L3Q5GJ75 292 aa21.27■■□□□ 1
SPG7-202ENST00000341316 PPP1R2P3Q6NXS1 205 aa21.27■■□□□ 1
SPG7-202ENST00000341316 DENND1BQ6P3S1 775 aa21.27■■□□□ 1
SPG7-202ENST00000341316 DNAJC24Q6P3W2 148 aa21.27■■□□□ 1
SPG7-202ENST00000341316 TRMT10CQ7L0Y3 403 aaKnown RBP21.27■■□□□ 1
SPG7-202ENST00000341316 TMEM35BQ8NCS4 154 aa21.27■■□□□ 1
SPG7-202ENST00000341316 ACSF2Q96CM8 615 aaPredicted RBP21.27■■□□□ 1
SPG7-202ENST00000341316 SCLT1Q96NL6 688 aa21.27■■□□□ 1
SPG7-202ENST00000341316 HAUS2Q9NVX0 235 aa21.27■■□□□ 1
SPG7-202ENST00000341316 TJP2Q9UDY2 1190 aa21.27■■□□□ 1
SPG7-202ENST00000341316 SIX4Q9UIU6 781 aa21.27■■□□□ 1
SPG7-202ENST00000341316 RASGRF2O14827 1237 aa21.26■□□□□ 0.99
SPG7-202ENST00000341316 HBP1O60381 514 aa21.26■□□□□ 0.99
SPG7-202ENST00000341316 CALB1P05937 261 aa21.26■□□□□ 0.99
SPG7-202ENST00000341316 GJA5P36382 358 aa21.26■□□□□ 0.99
SPG7-202ENST00000341316 LACTB2Q53H82 288 aaPredicted RBP21.26■□□□□ 0.99
SPG7-202ENST00000341316 KAZNQ674X7 775 aa21.26■□□□□ 0.99
SPG7-202ENST00000341316 MFSD7Q6UXD7 560 aa21.26■□□□□ 0.99
SPG7-202ENST00000341316 EXOC8Q8IYI6 725 aa21.26■□□□□ 0.99
SPG7-202ENST00000341316 SLITRK1Q96PX8 696 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms