RNA–Protein interactions for RNA: ENST00000341165.10

NBR1-201, Transcript of NBR1, autophagy cargo receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NBR1, Length 4,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBR1-201ENST00000341165 UNGP13051 313 aaPredicted RBP8.44□□□□□ -1.06
NBR1-201ENST00000341165 SNX16P57768 344 aa8.44□□□□□ -1.06
NBR1-201ENST00000341165 COPS2P61201 443 aa8.44□□□□□ -1.06
NBR1-201ENST00000341165 PLCB3Q01970 1234 aa8.44□□□□□ -1.06
NBR1-201ENST00000341165 IFT88Q13099 833 aa8.44□□□□□ -1.06
NBR1-201ENST00000341165 ZNF699Q32M78 642 aa8.44□□□□□ -1.06
NBR1-201ENST00000341165 C6orf163Q5TEZ5 329 aa8.44□□□□□ -1.06
NBR1-201ENST00000341165 GPC2Q8N158 579 aa8.44□□□□□ -1.06
NBR1-201ENST00000341165 KCNN1Q92952 543 aa8.44□□□□□ -1.06
NBR1-201ENST00000341165 CYFIP2Q96F07 1278 aa8.44□□□□□ -1.06
NBR1-201ENST00000341165 TTC25Q96NG3 672 aa8.44□□□□□ -1.06
NBR1-201ENST00000341165 SERPINB12Q96P63 405 aa8.44□□□□□ -1.06
NBR1-201ENST00000341165 RPF1Q9H9Y2 349 aaKnown RBP8.44□□□□□ -1.06
NBR1-201ENST00000341165 ZDHHC18Q9NUE0 388 aa8.44□□□□□ -1.06
NBR1-201ENST00000341165 TMA7Q9Y2S6 64 aaKnown RBP8.44□□□□□ -1.06
NBR1-201ENST00000341165 NFS1Q9Y697 457 aa8.44□□□□□ -1.06
NBR1-201ENST00000341165 MAFO75444 373 aaPredicted RBP8.44□□□□□ -1.06
NBR1-201ENST00000341165 CYP1A1P04798 512 aaPredicted RBP8.44□□□□□ -1.06
NBR1-201ENST00000341165 SRGAP2CP0DJJ0 459 aa8.44□□□□□ -1.06
NBR1-201ENST00000341165 CHRM1P11229 460 aaPredicted RBP8.44□□□□□ -1.06
NBR1-201ENST00000341165 CD19P15391 556 aa8.44□□□□□ -1.06
NBR1-201ENST00000341165 TCF7P36402 384 aaPredicted RBP8.44□□□□□ -1.06
NBR1-201ENST00000341165 MARCKSL1P49006 195 aa8.44□□□□□ -1.06
NBR1-201ENST00000341165 CLDN10P78369 228 aa8.44□□□□□ -1.06
NBR1-201ENST00000341165 TFAMQ00059 246 aaKnown RBP8.44□□□□□ -1.06
NBR1-201ENST00000341165 MCL1Q07820 350 aa8.44□□□□□ -1.06
NBR1-201ENST00000341165 PTK6Q13882 451 aa8.44□□□□□ -1.06
NBR1-201ENST00000341165 MUM1Q2TAK8 710 aa8.44□□□□□ -1.06
NBR1-201ENST00000341165 PASD1Q8IV76 773 aa8.44□□□□□ -1.06
NBR1-201ENST00000341165 KATNAL2Q8IYT4 538 aa8.44□□□□□ -1.06
NBR1-201ENST00000341165 TTC39CQ8N584 583 aa8.44□□□□□ -1.06
NBR1-201ENST00000341165 RMDN2Q96LZ7 410 aa8.44□□□□□ -1.06
NBR1-201ENST00000341165 XPO6Q96QU8 1125 aaKnown RBP8.44□□□□□ -1.06
NBR1-201ENST00000341165 OSBPL8Q9BZF1 889 aa8.44□□□□□ -1.06
NBR1-201ENST00000341165 PALMDQ9NP74 551 aa8.44□□□□□ -1.06
NBR1-201ENST00000341165 KCNK9Q9NPC2 374 aa8.44□□□□□ -1.06
NBR1-201ENST00000341165 ZNF148Q9UQR1 794 aa8.44□□□□□ -1.06
NBR1-201ENST00000341165 A0A0B4J269 797 aa8.43□□□□□ -1.06
NBR1-201ENST00000341165 RIPK2O43353 540 aa8.43□□□□□ -1.06
NBR1-201ENST00000341165 NR1H3Q13133 447 aa8.43□□□□□ -1.06
NBR1-201ENST00000341165 PRAMEF18Q5VWM3 479 aa8.43□□□□□ -1.06
NBR1-201ENST00000341165 TRIM74Q86UV6 250 aa8.43□□□□□ -1.06
NBR1-201ENST00000341165 TRIM73Q86UV7 250 aa8.43□□□□□ -1.06
NBR1-201ENST00000341165 TTC13Q8NBP0 860 aa8.43□□□□□ -1.06
NBR1-201ENST00000341165 SNRNP27Q8WVK2 155 aaKnown RBP8.43□□□□□ -1.06
NBR1-201ENST00000341165 DDX1Q92499 740 aaKnown RBP8.43□□□□□ -1.06
NBR1-201ENST00000341165 DCLK3Q9C098 648 aa8.43□□□□□ -1.06
NBR1-201ENST00000341165 SMARCAD1Q9H4L7 1026 aa8.43□□□□□ -1.06
NBR1-201ENST00000341165 GPRC5DQ9NZD1 345 aa8.43□□□□□ -1.06
NBR1-201ENST00000341165 ATP2A2P16615 1042 aaKnown RBP8.43□□□□□ -1.06
NBR1-201ENST00000341165 ATF7P17544 494 aaPredicted RBP8.43□□□□□ -1.06
NBR1-201ENST00000341165 UBA1P22314 1058 aaKnown RBP8.43□□□□□ -1.06
NBR1-201ENST00000341165 TMOD1P28289 359 aa8.43□□□□□ -1.06
NBR1-201ENST00000341165 FLT3P36888 993 aa8.43□□□□□ -1.06
NBR1-201ENST00000341165 MYO1EQ12965 1108 aa8.43□□□□□ -1.06
NBR1-201ENST00000341165 PCGF5Q86SE9 256 aa8.43□□□□□ -1.06
NBR1-201ENST00000341165 FRMD8P1Q9BZ68 369 aaPredicted RBP8.43□□□□□ -1.06
NBR1-201ENST00000341165 SPATC1LQ9H0A9 340 aa8.43□□□□□ -1.06
NBR1-201ENST00000341165 PRM3Q9NNZ6 103 aa8.43□□□□□ -1.06
NBR1-201ENST00000341165 WDR35Q9P2L0 1181 aa8.43□□□□□ -1.06
NBR1-201ENST00000341165 INO80B-WBP1J3KQ70 363 aa8.43□□□□□ -1.06
NBR1-201ENST00000341165 TRAPPC3O43617 180 aa8.43□□□□□ -1.06
NBR1-201ENST00000341165 FGFR4P22455 802 aa8.43□□□□□ -1.06
NBR1-201ENST00000341165 KCNJ1P48048 391 aa8.43□□□□□ -1.06
NBR1-201ENST00000341165 STAT4Q14765 748 aa8.43□□□□□ -1.06
NBR1-201ENST00000341165 C16orf87Q6PH81 154 aa8.43□□□□□ -1.06
NBR1-201ENST00000341165 LBX2Q6XYB7 198 aa8.43□□□□□ -1.06
NBR1-201ENST00000341165 C15orf39Q6ZRI6 1047 aa8.43□□□□□ -1.06
NBR1-201ENST00000341165 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.43□□□□□ -1.066e-13■□□□□ 8.1
NBR1-201ENST00000341165 PRPF31Q8WWY3 499 aaKnown RBP8.43□□□□□ -1.06
NBR1-201ENST00000341165 WNK4Q96J92 1243 aa8.43□□□□□ -1.06
NBR1-201ENST00000341165 INO80BQ9C086 356 aaPredicted RBP8.43□□□□□ -1.06
NBR1-201ENST00000341165 PPCSQ9HAB8 311 aa8.43□□□□□ -1.06
NBR1-201ENST00000341165 ACP6Q9NPH0 428 aa8.43□□□□□ -1.06
NBR1-201ENST00000341165 NR2E1Q9Y466 385 aa8.43□□□□□ -1.06
NBR1-201ENST00000341165 TNS1Q9HBL0 1735 aaKnown RBP8.43□□□□□ -1.06
NBR1-201ENST00000341165 KRT19P08727 400 aa8.42□□□□□ -1.06
NBR1-201ENST00000341165 PHKA2P46019 1235 aa8.42□□□□□ -1.06
NBR1-201ENST00000341165 TTLL4Q14679 1199 aa8.42□□□□□ -1.06
NBR1-201ENST00000341165 ZNF568Q3ZCX4 644 aa8.42□□□□□ -1.06
NBR1-201ENST00000341165 ZNF667Q5HYK9 610 aa8.42□□□□□ -1.06
NBR1-201ENST00000341165 LRRC38Q5VT99 294 aa8.42□□□□□ -1.06
NBR1-201ENST00000341165 AADACL2Q6P093 401 aa8.42□□□□□ -1.06
NBR1-201ENST00000341165 PPP1R21Q6ZMI0 780 aa8.42□□□□□ -1.06
NBR1-201ENST00000341165 MON1BQ7L1V2 547 aa8.42□□□□□ -1.06
NBR1-201ENST00000341165 FASTKD5Q7L8L6 764 aaKnown RBP8.42□□□□□ -1.06
NBR1-201ENST00000341165 RNF149Q8NC42 400 aa8.42□□□□□ -1.06
NBR1-201ENST00000341165 SPDYE1Q8NFV5 336 aaPredicted RBP8.42□□□□□ -1.06
NBR1-201ENST00000341165 PDGFDQ9GZP0 370 aaPredicted RBP8.42□□□□□ -1.06
NBR1-201ENST00000341165 ADGRA3Q8IWK6 1321 aa8.42□□□□□ -1.06
NBR1-201ENST00000341165 ASB14A6NK59 587 aa8.42□□□□□ -1.06
NBR1-201ENST00000341165 CXCL11O14625 94 aa8.42□□□□□ -1.06
NBR1-201ENST00000341165 HBP1O60381 514 aa8.42□□□□□ -1.06
NBR1-201ENST00000341165 STBD1O95210 358 aa8.42□□□□□ -1.06
NBR1-201ENST00000341165 EGFRP00533 1210 aa8.42□□□□□ -1.06
NBR1-201ENST00000341165 KRT7P08729 469 aa8.42□□□□□ -1.06
NBR1-201ENST00000341165 PAEPP09466 180 aa8.42□□□□□ -1.06
NBR1-201ENST00000341165 RALAP11233 206 aa8.42□□□□□ -1.06
NBR1-201ENST00000341165 ZFXP17010 805 aaPredicted RBP8.42□□□□□ -1.06
NBR1-201ENST00000341165 CD58P19256 250 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms