RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 HNRNPH3P31942 346 aaKnown RBP6.82□□□□□ -1.32
HMG20A-201ENST00000336216 PHBP35232 272 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 ARL4AP40617 200 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 HUNKP57058 714 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 MYL6P60660 151 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 OVGP1Q12889 678 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 MAPK7Q13164 816 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 UGCGQ16739 394 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 LRRC36Q1X8D7 754 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 Q4G0T1 1027 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 MDH1BQ5I0G3 518 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 ANKRD20A2Q5SQ80 823 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 ANKRD20A1Q5TYW2 823 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 ATF7IP2Q5U623 682 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 SLC30A9Q6PML9 568 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 HACE1Q8IYU2 909 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 AGR3Q8TD06 166 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 TRPM4Q8TD43 1214 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 CLMNQ96JQ2 1002 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 MTFR1LQ9H019 292 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 KCNMB3Q9NPA1 279 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 SCINQ9Y6U3 715 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 RREB1Q92766 1687 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 ARHGAP42A6NI28 874 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 TNPO2O14787 897 aaKnown RBP6.82□□□□□ -1.32
HMG20A-201ENST00000336216 GH1P01241 217 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 APRTP07741 180 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 VIL1P09327 827 aaKnown RBP6.82□□□□□ -1.32
HMG20A-201ENST00000336216 GNAT1P11488 350 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 SDC4P31431 198 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 RANBP1P43487 201 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 CPA2P48052 419 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 BCAR1P56945 870 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 RRP1BQ14684 758 aaKnown RBP6.82□□□□□ -1.32
HMG20A-201ENST00000336216 TAF1CQ15572 869 aaPredicted RBP6.82□□□□□ -1.32
HMG20A-201ENST00000336216 CCDC62Q6P9F0 684 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 POTEAQ6S8J7 498 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 C1orf186Q6ZWK4 172 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 RAPH1Q70E73 1250 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 PCGF5Q86SE9 256 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 NT5DC3Q86UY8 548 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 GBP7Q8N8V2 638 aaPredicted RBP6.82□□□□□ -1.32
HMG20A-201ENST00000336216 OR6J1Q8NGC5 347 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 AFG1LQ8WV93 481 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 NAF1Q96HR8 494 aaKnown RBP6.82□□□□□ -1.32
HMG20A-201ENST00000336216 SCYL1Q96KG9 808 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 FAM167AQ96KS9 214 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 SH3GL3Q99963 347 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 TMEM8AQ9HCN3 771 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 IGSF9BQ9UPX0 1349 aa6.82□□□□□ -1.32
HMG20A-201ENST00000336216 COL5A3P25940 1745 aaPredicted RBP6.82□□□□□ -1.32
HMG20A-201ENST00000336216 A0A087WZ62 844 aa6.81□□□□□ -1.32
HMG20A-201ENST00000336216 MAPK13O15264 365 aa6.81□□□□□ -1.32
HMG20A-201ENST00000336216 HUS1O60921 280 aa6.81□□□□□ -1.32
HMG20A-201ENST00000336216 PTPRAP18433 802 aa6.81□□□□□ -1.32
HMG20A-201ENST00000336216 CHRNA3P32297 505 aa6.81□□□□□ -1.32
HMG20A-201ENST00000336216 SLC12A2P55011 1212 aa6.81□□□□□ -1.32
HMG20A-201ENST00000336216 MRPS9P82933 396 aaKnown RBP6.81□□□□□ -1.32
HMG20A-201ENST00000336216 P3H1Q32P28 736 aa6.81□□□□□ -1.32
HMG20A-201ENST00000336216 ARMC3Q5W041 872 aa6.81□□□□□ -1.32
HMG20A-201ENST00000336216 PHLDB3Q6NSJ2 640 aa6.81□□□□□ -1.32
HMG20A-201ENST00000336216 ANKRD13AQ8IZ07 590 aa6.81□□□□□ -1.32
HMG20A-201ENST00000336216 SCFD2Q8WU76 684 aa6.81□□□□□ -1.32
HMG20A-201ENST00000336216 SREK1Q8WXA9 508 aaKnown RBP6.81□□□□□ -1.32
HMG20A-201ENST00000336216 MKL1Q969V6 931 aa6.81□□□□□ -1.32
HMG20A-201ENST00000336216 ACAP3Q96P50 834 aa6.81□□□□□ -1.32
HMG20A-201ENST00000336216 TTC1Q99614 292 aa6.81□□□□□ -1.32
HMG20A-201ENST00000336216 FDXACB1Q9BRP7 624 aaPredicted RBP6.81□□□□□ -1.32
HMG20A-201ENST00000336216 OSBPL8Q9BZF1 889 aa6.81□□□□□ -1.32
HMG20A-201ENST00000336216 CDC42EP4Q9H3Q1 356 aaKnown RBP6.81□□□□□ -1.32
HMG20A-201ENST00000336216 NPHS2Q9NP85 383 aa6.81□□□□□ -1.32
HMG20A-201ENST00000336216 BATF3Q9NR55 127 aa6.81□□□□□ -1.32
HMG20A-201ENST00000336216 SCOCQ9UIL1 159 aa6.81□□□□□ -1.32
HMG20A-201ENST00000336216 SCN7AQ01118 1682 aa6.81□□□□□ -1.32
HMG20A-201ENST00000336216 UTRNP46939 3433 aa6.81□□□□□ -1.32
HMG20A-201ENST00000336216 FAM187AA6NFU0 413 aa6.81□□□□□ -1.32
HMG20A-201ENST00000336216 EIF3DO15371 548 aaKnown RBP eCLIP6.81□□□□□ -1.32
HMG20A-201ENST00000336216 CST8O60676 142 aa6.81□□□□□ -1.32
HMG20A-201ENST00000336216 PSMD10O75832 226 aa6.81□□□□□ -1.32
HMG20A-201ENST00000336216 ATXN8OSP0DMR3 200 aa6.81□□□□□ -1.32
HMG20A-201ENST00000336216 CXCL8P10145 99 aa6.81□□□□□ -1.32
HMG20A-201ENST00000336216 TROVE2P10155 538 aaKnown RBP eCLIP6.81□□□□□ -1.32
HMG20A-201ENST00000336216 HSPA6P17066 643 aa6.81□□□□□ -1.32
HMG20A-201ENST00000336216 TNFRSF8P28908 595 aa6.81□□□□□ -1.32
HMG20A-201ENST00000336216 ZNF157P51786 506 aaPredicted RBP6.81□□□□□ -1.32
HMG20A-201ENST00000336216 SESN2P58004 480 aaPredicted RBP6.81□□□□□ -1.32
HMG20A-201ENST00000336216 LMNB2Q03252 620 aa6.81□□□□□ -1.32
HMG20A-201ENST00000336216 XRCC4Q13426 336 aa6.81□□□□□ -1.32
HMG20A-201ENST00000336216 GNASQ5JWF2 1037 aa6.81□□□□□ -1.32
HMG20A-201ENST00000336216 FAM83AQ86UY5 434 aa6.81□□□□□ -1.32
HMG20A-201ENST00000336216 FAM228AQ86W67 206 aa6.81□□□□□ -1.32
HMG20A-201ENST00000336216 ZSWIM2Q8NEG5 633 aa6.81□□□□□ -1.32
HMG20A-201ENST00000336216 LRRN4Q8WUT4 740 aa6.81□□□□□ -1.32
HMG20A-201ENST00000336216 TEKT4Q8WW24 435 aa6.81□□□□□ -1.32
HMG20A-201ENST00000336216 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.81□□□□□ -1.324e-7■■■■■ 58.1
HMG20A-201ENST00000336216 HSD17B14Q9BPX1 270 aa6.81□□□□□ -1.32
HMG20A-201ENST00000336216 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.81□□□□□ -1.32
HMG20A-201ENST00000336216 CPA4Q9UI42 421 aa6.81□□□□□ -1.32
HMG20A-201ENST00000336216 SNX3O60493 162 aa6.81□□□□□ -1.32
HMG20A-201ENST00000336216 TOM1L1O75674 476 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms