RNA–Protein interactions for RNA: ENST00000335790.7

LMO1-201, Transcript of LIM domain only 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LMO1, Length 1,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-201ENST00000335790 PTPN11Q06124 597 aaPredicted RBP14.34□□□□□ -0.11
LMO1-201ENST00000335790 MAMLD1Q13495 774 aa14.34□□□□□ -0.11
LMO1-201ENST00000335790 PPP1R15BQ5SWA1 713 aa14.34□□□□□ -0.11
LMO1-201ENST00000335790 SERINC5Q86VE9 423 aa14.34□□□□□ -0.11
LMO1-201ENST00000335790 BEST2Q8NFU1 509 aa14.34□□□□□ -0.11
LMO1-201ENST00000335790 RNPC3Q96LT9 517 aaKnown RBP14.34□□□□□ -0.11
LMO1-201ENST00000335790 ZMAT2Q96NC0 199 aaKnown RBP14.34□□□□□ -0.11
LMO1-201ENST00000335790 SMYD3Q9H7B4 428 aa14.34□□□□□ -0.11
LMO1-201ENST00000335790 PARVAQ9NVD7 372 aa14.34□□□□□ -0.11
LMO1-201ENST00000335790 ANAPC7Q9UJX3 599 aa14.34□□□□□ -0.11
LMO1-201ENST00000335790 BARX2Q9UMQ3 279 aaPredicted RBP14.34□□□□□ -0.11
LMO1-201ENST00000335790 UBQLN1Q9UMX0 589 aaKnown RBP14.34□□□□□ -0.11
LMO1-201ENST00000335790 TRPV2Q9Y5S1 764 aa14.34□□□□□ -0.11
LMO1-201ENST00000335790 XPOTO43592 962 aaKnown RBP14.33□□□□□ -0.12
LMO1-201ENST00000335790 RECQL4O94761 1208 aa14.33□□□□□ -0.12
LMO1-201ENST00000335790 GNRH1P01148 92 aa14.33□□□□□ -0.12
LMO1-201ENST00000335790 CD4P01730 458 aa14.33□□□□□ -0.12
LMO1-201ENST00000335790 VDRP11473 427 aa14.33□□□□□ -0.12
LMO1-201ENST00000335790 DNA2P51530 1060 aa14.33□□□□□ -0.12
LMO1-201ENST00000335790 CDH8P55286 799 aa14.33□□□□□ -0.12
LMO1-201ENST00000335790 MGAT3Q09327 533 aa14.33□□□□□ -0.12
LMO1-201ENST00000335790 MYO1EQ12965 1108 aa14.33□□□□□ -0.12
LMO1-201ENST00000335790 TRIM32Q13049 653 aa14.33□□□□□ -0.12
LMO1-201ENST00000335790 CNGA2Q16280 664 aa14.33□□□□□ -0.12
LMO1-201ENST00000335790 SCARA5Q6ZMJ2 495 aa14.33□□□□□ -0.12
LMO1-201ENST00000335790 LIMS2Q7Z4I7 341 aa14.33□□□□□ -0.12
LMO1-201ENST00000335790 RSPH3Q86UC2 560 aa14.33□□□□□ -0.12
LMO1-201ENST00000335790 FAM228AQ86W67 206 aa14.33□□□□□ -0.12
LMO1-201ENST00000335790 FEZF2Q8TBJ5 459 aa14.33□□□□□ -0.12
LMO1-201ENST00000335790 PPP1R13LQ8WUF5 828 aa14.33□□□□□ -0.12
LMO1-201ENST00000335790 HDAC7Q8WUI4 952 aa14.33□□□□□ -0.12
LMO1-201ENST00000335790 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.33□□□□□ -0.12
LMO1-201ENST00000335790 KRT35Q92764 455 aa14.33□□□□□ -0.12
LMO1-201ENST00000335790 TMEM176AQ96HP8 235 aa14.33□□□□□ -0.12
LMO1-201ENST00000335790 C11orf70Q9BRQ4 267 aa14.33□□□□□ -0.12
LMO1-201ENST00000335790 UBXN6Q9BZV1 441 aa14.33□□□□□ -0.12
LMO1-201ENST00000335790 ELOVL4Q9GZR5 314 aa14.33□□□□□ -0.12
LMO1-201ENST00000335790 NXF3Q9H4D5 531 aaKnown RBP14.33□□□□□ -0.12
LMO1-201ENST00000335790 CHST12Q9NRB3 414 aa14.33□□□□□ -0.12
LMO1-201ENST00000335790 SRRDQ9UH36 339 aa14.33□□□□□ -0.12
LMO1-201ENST00000335790 STRIP2Q9ULQ0 834 aa14.33□□□□□ -0.12
LMO1-201ENST00000335790 PIN4Q9Y237 131 aaKnown RBP14.33□□□□□ -0.12
LMO1-201ENST00000335790 FRMPD3Q5JV73 1810 aa14.32□□□□□ -0.12
LMO1-201ENST00000335790 TMEM191CA6NGB0 347 aa14.32□□□□□ -0.12
LMO1-201ENST00000335790 MYO1FO00160 1098 aa14.32□□□□□ -0.12
LMO1-201ENST00000335790 KRIT1O00522 736 aa14.32□□□□□ -0.12
LMO1-201ENST00000335790 PIRO00625 290 aa14.32□□□□□ -0.12
LMO1-201ENST00000335790 SPOPO43791 374 aa14.32□□□□□ -0.12
LMO1-201ENST00000335790 SASH3O75995 380 aa14.32□□□□□ -0.12
LMO1-201ENST00000335790 PGK1P00558 417 aa14.32□□□□□ -0.12
LMO1-201ENST00000335790 HMGCRP04035 888 aa14.32□□□□□ -0.12
LMO1-201ENST00000335790 FAM163BP0C2L3 166 aa14.32□□□□□ -0.12
LMO1-201ENST00000335790 HOXD10P28358 340 aa14.32□□□□□ -0.12
LMO1-201ENST00000335790 GUCY2FP51841 1108 aa14.32□□□□□ -0.12
LMO1-201ENST00000335790 STILQ15468 1287 aa14.32□□□□□ -0.12
LMO1-201ENST00000335790 GDF6Q6KF10 455 aaPredicted RBP14.32□□□□□ -0.12
LMO1-201ENST00000335790 CXCL17Q6UXB2 119 aa14.32□□□□□ -0.12
LMO1-201ENST00000335790 MMS22LQ6ZRQ5 1243 aa14.32□□□□□ -0.12
LMO1-201ENST00000335790 HDXQ7Z353 690 aa14.32□□□□□ -0.12
LMO1-201ENST00000335790 PASD1Q8IV76 773 aa14.32□□□□□ -0.12
LMO1-201ENST00000335790 SMG8Q8ND04 991 aaKnown RBP14.32□□□□□ -0.12
LMO1-201ENST00000335790 C3orf20Q8ND61 904 aa14.32□□□□□ -0.12
LMO1-201ENST00000335790 AENQ8WTP8 325 aaKnown RBP14.32□□□□□ -0.12
LMO1-201ENST00000335790 SEC14L1Q92503 715 aa14.32□□□□□ -0.12
LMO1-201ENST00000335790 TWNKQ96RR1 684 aa14.32□□□□□ -0.12
LMO1-201ENST00000335790 KRT12Q99456 494 aa14.32□□□□□ -0.12
LMO1-201ENST00000335790 SENP6Q9GZR1 1112 aaPredicted RBP14.32□□□□□ -0.12
LMO1-201ENST00000335790 VIPAS39Q9H9C1 493 aa14.32□□□□□ -0.12
LMO1-201ENST00000335790 XPNPEP3Q9NQH7 507 aa14.32□□□□□ -0.12
LMO1-201ENST00000335790 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.32□□□□□ -0.12
LMO1-201ENST00000335790 CHORDC1Q9UHD1 332 aaPredicted RBP14.32□□□□□ -0.12
LMO1-201ENST00000335790 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.32□□□□□ -0.12
LMO1-201ENST00000335790 GINS2Q9Y248 185 aa14.32□□□□□ -0.12
LMO1-201ENST00000335790 CEP83Q9Y592 693 aa14.32□□□□□ -0.12
LMO1-201ENST00000335790 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.32□□□□□ -0.12
LMO1-201ENST00000335790 SMIM28A0A1B0GU29 152 aa14.31□□□□□ -0.12
LMO1-201ENST00000335790 M0QZ92 97 aa14.31□□□□□ -0.12
LMO1-201ENST00000335790 O00370 1275 aa14.31□□□□□ -0.12
LMO1-201ENST00000335790 SART1O43290 800 aaKnown RBP14.31□□□□□ -0.12
LMO1-201ENST00000335790 PSTPIP1O43586 416 aa14.31□□□□□ -0.12
LMO1-201ENST00000335790 FGGP02679 453 aa14.31□□□□□ -0.12
LMO1-201ENST00000335790 CCND3P30281 292 aaPredicted RBP14.31□□□□□ -0.12
LMO1-201ENST00000335790 RAP1GAPP47736 663 aa14.31□□□□□ -0.12
LMO1-201ENST00000335790 GABRB2P47870 512 aa14.31□□□□□ -0.12
LMO1-201ENST00000335790 MARCKSL1P49006 195 aa14.31□□□□□ -0.12
LMO1-201ENST00000335790 RWDD2BP57060 319 aa14.31□□□□□ -0.12
LMO1-201ENST00000335790 CYP1B1Q16678 543 aa14.31□□□□□ -0.12
LMO1-201ENST00000335790 PTPROQ16827 1216 aa14.31□□□□□ -0.12
LMO1-201ENST00000335790 ZNF394Q53GI3 561 aa14.31□□□□□ -0.12
LMO1-201ENST00000335790 C9orf57Q5W0N0 161 aa14.31□□□□□ -0.12
LMO1-201ENST00000335790 DENND1BQ6P3S1 775 aa14.31□□□□□ -0.12
LMO1-201ENST00000335790 UNC93AQ86WB7 457 aa14.31□□□□□ -0.12
LMO1-201ENST00000335790 ERICH1Q86X53 443 aa14.31□□□□□ -0.12
LMO1-201ENST00000335790 IFT20Q8IY31 132 aa14.31□□□□□ -0.12
LMO1-201ENST00000335790 TMEM130Q8N3G9 435 aa14.31□□□□□ -0.12
LMO1-201ENST00000335790 NIPA2Q8N8Q9 360 aa14.31□□□□□ -0.12
LMO1-201ENST00000335790 PCSK9Q8NBP7 692 aaKnown RBP14.31□□□□□ -0.12
LMO1-201ENST00000335790 C1orf131Q8NDD1 294 aaKnown RBP14.31□□□□□ -0.12
LMO1-201ENST00000335790 PXYLP1Q8TE99 480 aa14.31□□□□□ -0.12
LMO1-201ENST00000335790 BTBD6Q96KE9 485 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms