RNA–Protein interactions for RNA: ENST00000334731.6

C9orf85-201, Transcript of chromosome 9 open reading frame 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf85, Length 1,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-201ENST00000334731 SCARA3Q6AZY7 606 aa12.11□□□□□ -0.47
C9orf85-201ENST00000334731 TANGO2Q6ICL3 276 aa12.11□□□□□ -0.47
C9orf85-201ENST00000334731 PHLDB3Q6NSJ2 640 aa12.11□□□□□ -0.47
C9orf85-201ENST00000334731 STXBP4Q6ZWJ1 553 aa12.11□□□□□ -0.47
C9orf85-201ENST00000334731 EPM2AIP1Q7L775 607 aaPredicted RBP12.11□□□□□ -0.47
C9orf85-201ENST00000334731 ZNF507Q8TCN5 953 aa12.11□□□□□ -0.47
C9orf85-201ENST00000334731 ATOH1Q92858 354 aaPredicted RBP12.11□□□□□ -0.47
C9orf85-201ENST00000334731 ZSWIM3Q96MP5 696 aa12.11□□□□□ -0.47
C9orf85-201ENST00000334731 PYM1Q9BRP8 204 aaKnown RBP12.11□□□□□ -0.47
C9orf85-201ENST00000334731 LRRC3Q9BY71 257 aa12.11□□□□□ -0.47
C9orf85-201ENST00000334731 PLA2G2FQ9BZM2 168 aa12.11□□□□□ -0.47
C9orf85-201ENST00000334731 ZCWPW1Q9H0M4 648 aa12.11□□□□□ -0.47
C9orf85-201ENST00000334731 DNAJC25Q9H1X3 360 aa12.11□□□□□ -0.47
C9orf85-201ENST00000334731 TBC1D17Q9HA65 648 aa12.11□□□□□ -0.47
C9orf85-201ENST00000334731 ARHGEF3Q9NR81 526 aa12.11□□□□□ -0.47
C9orf85-201ENST00000334731 FAM86C1Q9NVL1 165 aa12.11□□□□□ -0.47
C9orf85-201ENST00000334731 RBAKQ9NYW8 714 aaPredicted RBP12.11□□□□□ -0.47
C9orf85-201ENST00000334731 DSEQ9UL01 958 aa12.11□□□□□ -0.47
C9orf85-201ENST00000334731 CFAP45Q9UL16 551 aa12.11□□□□□ -0.47
C9orf85-201ENST00000334731 YIPF1Q9Y548 306 aa12.11□□□□□ -0.47
C9orf85-201ENST00000334731 CITO14578 2027 aa12.11□□□□□ -0.47
C9orf85-201ENST00000334731 WDFY4Q6ZS81 3184 aa12.11□□□□□ -0.47
C9orf85-201ENST00000334731 MTMR11A4FU01 709 aa12.1□□□□□ -0.47
C9orf85-201ENST00000334731 TULP1O00294 542 aaPredicted RBP12.1□□□□□ -0.47
C9orf85-201ENST00000334731 MYL4P12829 197 aa12.1□□□□□ -0.47
C9orf85-201ENST00000334731 ALDH1A3P47895 512 aa12.1□□□□□ -0.47
C9orf85-201ENST00000334731 EPHB3P54753 998 aa12.1□□□□□ -0.47
C9orf85-201ENST00000334731 STARD6P59095 220 aa12.1□□□□□ -0.47
C9orf85-201ENST00000334731 ASIC1P78348 528 aa12.1□□□□□ -0.47
C9orf85-201ENST00000334731 EHHADHQ08426 723 aa12.1□□□□□ -0.47
C9orf85-201ENST00000334731 PLD1Q13393 1074 aa12.1□□□□□ -0.47
C9orf85-201ENST00000334731 SNW1Q13573 536 aaKnown RBP12.1□□□□□ -0.47
C9orf85-201ENST00000334731 SLC44A4Q53GD3 710 aa12.1□□□□□ -0.47
C9orf85-201ENST00000334731 FAM78AQ5JUQ0 283 aa12.1□□□□□ -0.47
C9orf85-201ENST00000334731 LRRTM3Q86VH5 581 aa12.1□□□□□ -0.47
C9orf85-201ENST00000334731 METTL23Q86XA0 190 aa12.1□□□□□ -0.47
C9orf85-201ENST00000334731 CCDC105Q8IYK2 499 aa12.1□□□□□ -0.47
C9orf85-201ENST00000334731 GPD1LQ8N335 351 aa12.1□□□□□ -0.47
C9orf85-201ENST00000334731 C1orf127Q8N9H9 656 aa12.1□□□□□ -0.47
C9orf85-201ENST00000334731 DTWD2Q8NBA8 298 aa12.1□□□□□ -0.47
C9orf85-201ENST00000334731 LEMD2Q8NC56 503 aa12.1□□□□□ -0.47
C9orf85-201ENST00000334731 CXorf38Q8TB03 319 aa12.1□□□□□ -0.47
C9orf85-201ENST00000334731 CACTINQ8WUQ7 758 aaKnown RBP12.1□□□□□ -0.47
C9orf85-201ENST00000334731 FAM84AQ96KN4 292 aa12.1□□□□□ -0.47
C9orf85-201ENST00000334731 BLZF1Q9H2G9 400 aa12.1□□□□□ -0.47
C9orf85-201ENST00000334731 MAGEF1Q9HAY2 307 aa12.1□□□□□ -0.47
C9orf85-201ENST00000334731 PDE11AQ9HCR9 933 aa12.1□□□□□ -0.47
C9orf85-201ENST00000334731 ASAH2Q9NR71 780 aa12.1□□□□□ -0.47
C9orf85-201ENST00000334731 FAM13BQ9NYF5 915 aa12.1□□□□□ -0.47
C9orf85-201ENST00000334731 HSFX1Q9UBD0 423 aa12.1□□□□□ -0.47
C9orf85-201ENST00000334731 AGAP1Q9UPQ3 857 aa12.1□□□□□ -0.47
C9orf85-201ENST00000334731 DOCK8Q8NF50 2099 aa12.1□□□□□ -0.47
C9orf85-201ENST00000334731 KMT2EQ8IZD2 1858 aa12.1□□□□□ -0.47
C9orf85-201ENST00000334731 CACNA1HO95180 2353 aa12.1□□□□□ -0.47
C9orf85-201ENST00000334731 KIAA0391O15091 583 aaKnown RBP12.09□□□□□ -0.47
C9orf85-201ENST00000334731 EIF3DO15371 548 aaKnown RBP eCLIP12.09□□□□□ -0.47
C9orf85-201ENST00000334731 TGFB1I1O43294 461 aa12.09□□□□□ -0.47
C9orf85-201ENST00000334731 ITGB3P05106 788 aa12.09□□□□□ -0.47
C9orf85-201ENST00000334731 GJA1P17302 382 aa12.09□□□□□ -0.47
C9orf85-201ENST00000334731 FCARP24071 287 aa12.09□□□□□ -0.47
C9orf85-201ENST00000334731 CASP1P29466 404 aa12.09□□□□□ -0.47
C9orf85-201ENST00000334731 POLR2BP30876 1174 aaKnown RBP12.09□□□□□ -0.47
C9orf85-201ENST00000334731 PNPLA4P41247 253 aa12.09□□□□□ -0.47
C9orf85-201ENST00000334731 CDR1P51861 262 aa12.09□□□□□ -0.47
C9orf85-201ENST00000334731 PFKPQ01813 784 aa12.09□□□□□ -0.47
C9orf85-201ENST00000334731 SV2CQ496J9 727 aa12.09□□□□□ -0.47
C9orf85-201ENST00000334731 SLC39A12Q504Y0 691 aa12.09□□□□□ -0.47
C9orf85-201ENST00000334731 FAM26FQ5R3K3 315 aa12.09□□□□□ -0.47
C9orf85-201ENST00000334731 UNC13DQ70J99 1090 aa12.09□□□□□ -0.47
C9orf85-201ENST00000334731 DNAJB7Q7Z6W7 309 aaPredicted RBP12.09□□□□□ -0.47
C9orf85-201ENST00000334731 CBWD2Q8IUF1 395 aa12.09□□□□□ -0.47
C9orf85-201ENST00000334731 THEM5Q8N1Q8 247 aa12.09□□□□□ -0.47
C9orf85-201ENST00000334731 CSGALNACT2Q8N6G5 542 aa12.09□□□□□ -0.47
C9orf85-201ENST00000334731 TTC9BQ8N6N2 239 aa12.09□□□□□ -0.47
C9orf85-201ENST00000334731 SHKBP1Q8TBC3 707 aa12.09□□□□□ -0.47
C9orf85-201ENST00000334731 NOC3LQ8WTT2 800 aaKnown RBP12.09□□□□□ -0.47
C9orf85-201ENST00000334731 ELSPBP1Q96BH3 223 aa12.09□□□□□ -0.47
C9orf85-201ENST00000334731 SHDQ96IW2 340 aa12.09□□□□□ -0.47
C9orf85-201ENST00000334731 ZNF560Q96MR9 790 aa12.09□□□□□ -0.47
C9orf85-201ENST00000334731 ZFP14Q9HCL3 533 aa12.09□□□□□ -0.47
C9orf85-201ENST00000334731 HSPBP1Q9NZL4 362 aa12.09□□□□□ -0.47
C9orf85-201ENST00000334731 ITGA11Q9UKX5 1188 aa12.09□□□□□ -0.47
C9orf85-201ENST00000334731 ZDHHC9Q9Y397 364 aa12.09□□□□□ -0.47
C9orf85-201ENST00000334731 SIT1Q9Y3P8 196 aa12.09□□□□□ -0.47
C9orf85-201ENST00000334731 DOCK6Q96HP0 2047 aa12.09□□□□□ -0.47
C9orf85-201ENST00000334731 PDCD11Q14690 1871 aaKnown RBP12.08□□□□□ -0.48
C9orf85-201ENST00000334731 NOTCH4Q99466 2003 aa12.08□□□□□ -0.48
C9orf85-201ENST00000334731 PVALEFA0A1B0GWK0 134 aa12.08□□□□□ -0.48
C9orf85-201ENST00000334731 ZNF233A6NK53 670 aa12.08□□□□□ -0.48
C9orf85-201ENST00000334731 SOAT2O75908 522 aa12.08□□□□□ -0.48
C9orf85-201ENST00000334731 DCNP07585 359 aaKnown RBP12.08□□□□□ -0.48
C9orf85-201ENST00000334731 RFX1P22670 979 aa12.08□□□□□ -0.48
C9orf85-201ENST00000334731 DEKP35659 375 aaKnown RBP12.08□□□□□ -0.48
C9orf85-201ENST00000334731 AFMP43652 599 aa12.08□□□□□ -0.48
C9orf85-201ENST00000334731 TUFMP49411 452 aaKnown RBP12.08□□□□□ -0.48
C9orf85-201ENST00000334731 RBP5P82980 135 aa12.08□□□□□ -0.48
C9orf85-201ENST00000334731 CUL4BQ13620 913 aa12.08□□□□□ -0.48
C9orf85-201ENST00000334731 TEAD2Q15562 447 aa12.08□□□□□ -0.48
C9orf85-201ENST00000334731 TMC8Q8IU68 726 aa12.08□□□□□ -0.48
C9orf85-201ENST00000334731 PDCL2Q8N4E4 241 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms