RNA–Protein interactions for RNA: ENST00000334475.10

TREM1-202, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM1, Length 1,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-202ENST00000334475 RHOT1Q8IXI2 618 aa9.52□□□□□ -0.89
TREM1-202ENST00000334475 LRRC71Q8N4P6 559 aa9.52□□□□□ -0.89
TREM1-202ENST00000334475 ARFGAP2Q8N6H7 521 aa9.52□□□□□ -0.89
TREM1-202ENST00000334475 PRELID2Q8N945 189 aa9.52□□□□□ -0.89
TREM1-202ENST00000334475 TMEM35BQ8NCS4 154 aa9.52□□□□□ -0.89
TREM1-202ENST00000334475 GRK7Q8WTQ7 553 aa9.52□□□□□ -0.89
TREM1-202ENST00000334475 KRT35Q92764 455 aa9.52□□□□□ -0.89
TREM1-202ENST00000334475 KAT6AQ92794 2004 aa9.52□□□□□ -0.89
TREM1-202ENST00000334475 MAGOHBQ96A72 148 aaKnown RBP9.52□□□□□ -0.89
TREM1-202ENST00000334475 LRCH3Q96II8 777 aa9.52□□□□□ -0.89
TREM1-202ENST00000334475 GDAP1L1Q96MZ0 367 aa9.52□□□□□ -0.89
TREM1-202ENST00000334475 ASB7Q9H672 318 aa9.52□□□□□ -0.89
TREM1-202ENST00000334475 LRRC19Q9H756 370 aa9.52□□□□□ -0.89
TREM1-202ENST00000334475 VRTNQ9H8Y1 702 aa9.52□□□□□ -0.89
TREM1-202ENST00000334475 RPF1Q9H9Y2 349 aaKnown RBP9.52□□□□□ -0.89
TREM1-202ENST00000334475 PARVAQ9NVD7 372 aa9.52□□□□□ -0.89
TREM1-202ENST00000334475 CWC15Q9P013 229 aaKnown RBP9.52□□□□□ -0.89
TREM1-202ENST00000334475 ADAM22Q9P0K1 906 aa9.52□□□□□ -0.89
TREM1-202ENST00000334475 CALCOCO1Q9P1Z2 691 aa9.52□□□□□ -0.89
TREM1-202ENST00000334475 MTRF1LQ9UGC7 380 aaKnown RBP9.52□□□□□ -0.89
TREM1-202ENST00000334475 IP6K2Q9UHH9 426 aa9.52□□□□□ -0.89
TREM1-202ENST00000334475 FEZ2Q9UHY8 353 aaPredicted RBP9.52□□□□□ -0.89
TREM1-202ENST00000334475 CPA4Q9UI42 421 aa9.52□□□□□ -0.89
TREM1-202ENST00000334475 STRIP2Q9ULQ0 834 aa9.52□□□□□ -0.89
TREM1-202ENST00000334475 CEP83Q9Y592 693 aa9.52□□□□□ -0.89
TREM1-202ENST00000334475 MROH7Q68CQ1 1323 aa9.52□□□□□ -0.89
TREM1-202ENST00000334475 SRRM3A6NNA2 597 aaPredicted RBP9.51□□□□□ -0.89
TREM1-202ENST00000334475 INO80B-WBP1J3KQ70 363 aa9.51□□□□□ -0.89
TREM1-202ENST00000334475 PDHXO00330 501 aa9.51□□□□□ -0.89
TREM1-202ENST00000334475 DAPK3O43293 454 aa9.51□□□□□ -0.89
TREM1-202ENST00000334475 MED7O43513 233 aa9.51□□□□□ -0.89
TREM1-202ENST00000334475 PPFIA2O75334 1257 aa9.51□□□□□ -0.89
TREM1-202ENST00000334475 PPFIA4O75335 1185 aa9.51□□□□□ -0.89
TREM1-202ENST00000334475 STAU1O95793 577 aaKnown RBP9.51□□□□□ -0.89
TREM1-202ENST00000334475 PAEPP09466 180 aa9.51□□□□□ -0.89
TREM1-202ENST00000334475 FAM153BP0C7A2 387 aa9.51□□□□□ -0.89
TREM1-202ENST00000334475 PYGMP11217 842 aa9.51□□□□□ -0.89
TREM1-202ENST00000334475 HARSP12081 509 aaKnown RBP9.51□□□□□ -0.89
TREM1-202ENST00000334475 INSRRP14616 1297 aa9.51□□□□□ -0.89
TREM1-202ENST00000334475 CAPN2P17655 700 aa9.51□□□□□ -0.89
TREM1-202ENST00000334475 EIF4BP23588 611 aaKnown RBP9.51□□□□□ -0.89
TREM1-202ENST00000334475 RRM1P23921 792 aa9.51□□□□□ -0.89
TREM1-202ENST00000334475 ADORA2AP29274 412 aa9.51□□□□□ -0.89
TREM1-202ENST00000334475 COILP38432 576 aaPredicted RBP9.51□□□□□ -0.89
TREM1-202ENST00000334475 TNFSF9P41273 254 aa9.51□□□□□ -0.89
TREM1-202ENST00000334475 MARCKSL1P49006 195 aa9.51□□□□□ -0.89
TREM1-202ENST00000334475 GUCY2FP51841 1108 aa9.51□□□□□ -0.89
TREM1-202ENST00000334475 GSCP56915 257 aaPredicted RBP9.51□□□□□ -0.89
TREM1-202ENST00000334475 PCBP1Q15365 356 aaKnown RBP eCLIP9.51□□□□□ -0.89
TREM1-202ENST00000334475 TMEM132AQ24JP5 1023 aa9.51□□□□□ -0.89
TREM1-202ENST00000334475 ZNF699Q32M78 642 aa9.51□□□□□ -0.89
TREM1-202ENST00000334475 FAM153CQ494X1 144 aa9.51□□□□□ -0.89
TREM1-202ENST00000334475 AGBL2Q5U5Z8 902 aa9.51□□□□□ -0.89
TREM1-202ENST00000334475 CCDC137Q6PK04 289 aaKnown RBP9.51□□□□□ -0.89
TREM1-202ENST00000334475 ZBTB33Q86T24 672 aa9.51□□□□□ -0.89
TREM1-202ENST00000334475 ZNF410Q86VK4 478 aa9.51□□□□□ -0.89
TREM1-202ENST00000334475 KATNAL2Q8IYT4 538 aa9.51□□□□□ -0.89
TREM1-202ENST00000334475 FEZF2Q8TBJ5 459 aa9.51□□□□□ -0.89
TREM1-202ENST00000334475 ZNF606Q8WXB4 792 aa9.51□□□□□ -0.89
TREM1-202ENST00000334475 COPS5Q92905 334 aa9.51□□□□□ -0.89
TREM1-202ENST00000334475 CYFIP2Q96F07 1278 aa9.51□□□□□ -0.89
TREM1-202ENST00000334475 NLRP4Q96MN2 994 aa9.51□□□□□ -0.89
TREM1-202ENST00000334475 PARK7Q99497 189 aaKnown RBP9.51□□□□□ -0.89
TREM1-202ENST00000334475 FMO2Q99518 471 aa9.51□□□□□ -0.89
TREM1-202ENST00000334475 INO80BQ9C086 356 aaPredicted RBP9.51□□□□□ -0.89
TREM1-202ENST00000334475 MTMR12Q9C0I1 747 aa9.51□□□□□ -0.89
TREM1-202ENST00000334475 KATNBL1Q9H079 304 aa9.51□□□□□ -0.89
TREM1-202ENST00000334475 CDT1Q9H211 546 aa9.51□□□□□ -0.89
TREM1-202ENST00000334475 CYP3A43Q9HB55 503 aa9.51□□□□□ -0.89
TREM1-202ENST00000334475 ZFYVE28Q9HCC9 887 aa9.51□□□□□ -0.89
TREM1-202ENST00000334475 ERVK-5Q9HDB9 667 aa9.51□□□□□ -0.89
TREM1-202ENST00000334475 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.51□□□□□ -0.89
TREM1-202ENST00000334475 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.51□□□□□ -0.89
TREM1-202ENST00000334475 SLC5A4Q9NY91 659 aa9.51□□□□□ -0.89
TREM1-202ENST00000334475 FAM153AQ9UHL3 310 aa9.51□□□□□ -0.89
TREM1-202ENST00000334475 GABRQQ9UN88 632 aa9.51□□□□□ -0.89
TREM1-202ENST00000334475 UMODL1Q5DID0 1318 aa9.51□□□□□ -0.89
TREM1-202ENST00000334475 PDCD11Q14690 1871 aaKnown RBP9.51□□□□□ -0.89
TREM1-202ENST00000334475 RRN3P2A6NIE6 340 aa9.5□□□□□ -0.89
TREM1-202ENST00000334475 NDC80O14777 642 aa9.5□□□□□ -0.89
TREM1-202ENST00000334475 P4HA1P13674 534 aa9.5□□□□□ -0.89
TREM1-202ENST00000334475 MMP8P22894 467 aa9.5□□□□□ -0.89
TREM1-202ENST00000334475 POLR2BP30876 1174 aaKnown RBP9.5□□□□□ -0.89
TREM1-202ENST00000334475 HSD17B3P37058 310 aa9.5□□□□□ -0.89
TREM1-202ENST00000334475 CLCN3P51790 818 aa9.5□□□□□ -0.89
TREM1-202ENST00000334475 MYL6P60660 151 aa9.5□□□□□ -0.89
TREM1-202ENST00000334475 CAV1Q03135 178 aa9.5□□□□□ -0.89
TREM1-202ENST00000334475 GRB14Q14449 540 aa9.5□□□□□ -0.89
TREM1-202ENST00000334475 SLMAPQ14BN4 828 aa9.5□□□□□ -0.89
TREM1-202ENST00000334475 SIX1Q15475 284 aaPredicted RBP9.5□□□□□ -0.89
TREM1-202ENST00000334475 FAM110CQ1W6H9 321 aa9.5□□□□□ -0.89
TREM1-202ENST00000334475 ZNF667Q5HYK9 610 aa9.5□□□□□ -0.89
TREM1-202ENST00000334475 LRRC38Q5VT99 294 aa9.5□□□□□ -0.89
TREM1-202ENST00000334475 KDM7AQ6ZMT4 941 aa9.5□□□□□ -0.89
TREM1-202ENST00000334475 TMC3Q7Z5M5 1100 aa9.5□□□□□ -0.89
TREM1-202ENST00000334475 EXD1Q8NHP7 514 aa9.5□□□□□ -0.89
TREM1-202ENST00000334475 CPA5Q8WXQ8 436 aa9.5□□□□□ -0.89
TREM1-202ENST00000334475 RIN2Q8WYP3 895 aaPredicted RBP9.5□□□□□ -0.89
TREM1-202ENST00000334475 PIK3R5Q8WYR1 880 aa9.5□□□□□ -0.89
TREM1-202ENST00000334475 ATP6V1G3Q96LB4 118 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms