RNA–Protein interactions for RNA: ENST00000334352.8

USP16-201, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP16, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-201ENST00000334352 PDE4CQ08493 712 aa6.9□□□□□ -1.3
USP16-201ENST00000334352 ADCY1Q08828 1119 aa6.9□□□□□ -1.3
USP16-201ENST00000334352 OVOS1Q6IE37 1185 aa6.9□□□□□ -1.3
USP16-201ENST00000334352 RNF19BQ6ZMZ0 732 aa6.9□□□□□ -1.3
USP16-201ENST00000334352 GET4Q7L5D6 327 aaPredicted RBP6.9□□□□□ -1.3
USP16-201ENST00000334352 MON1AQ86VX9 555 aa6.9□□□□□ -1.3
USP16-201ENST00000334352 SECISBP2LQ93073 1101 aaKnown RBP6.9□□□□□ -1.3
USP16-201ENST00000334352 SENP8Q96LD8 212 aa6.9□□□□□ -1.3
USP16-201ENST00000334352 ZNF396Q96N95 335 aaPredicted RBP6.9□□□□□ -1.3
USP16-201ENST00000334352 MSTO1Q9BUK6 570 aa6.9□□□□□ -1.3
USP16-201ENST00000334352 PLA2G2FQ9BZM2 168 aa6.9□□□□□ -1.3
USP16-201ENST00000334352 UBXN6Q9BZV1 441 aa6.9□□□□□ -1.3
USP16-201ENST00000334352 TUBGCP4Q9UGJ1 667 aa6.9□□□□□ -1.3
USP16-201ENST00000334352 PRUNE2Q8WUY3 3088 aa6.9□□□□□ -1.3
USP16-201ENST00000334352 H3BQV1 296 aa6.9□□□□□ -1.3
USP16-201ENST00000334352 CCL16O15467 120 aa6.9□□□□□ -1.3
USP16-201ENST00000334352 ATG13O75143 517 aa6.9□□□□□ -1.3
USP16-201ENST00000334352 TBCAO75347 108 aaKnown RBP6.9□□□□□ -1.3
USP16-201ENST00000334352 ADSSP30520 456 aa6.9□□□□□ -1.3
USP16-201ENST00000334352 BRCC3P46736 316 aa6.9□□□□□ -1.3
USP16-201ENST00000334352 PSMD6Q15008 389 aa6.9□□□□□ -1.3
USP16-201ENST00000334352 SF3A1Q15459 793 aaKnown RBP6.9□□□□□ -1.3
USP16-201ENST00000334352 PEAR1Q5VY43 1037 aaPredicted RBP6.9□□□□□ -1.3
USP16-201ENST00000334352 JADE1Q6IE81 842 aa6.9□□□□□ -1.3
USP16-201ENST00000334352 KANK3Q6NY19 840 aa6.9□□□□□ -1.3
USP16-201ENST00000334352 LONP2Q86WA8 852 aa6.9□□□□□ -1.3
USP16-201ENST00000334352 C18orf25Q96B23 403 aaPredicted RBP6.9□□□□□ -1.3
USP16-201ENST00000334352 KIF12Q96FN5 646 aa6.9□□□□□ -1.3
USP16-201ENST00000334352 FAM83CQ9BQN1 747 aa6.9□□□□□ -1.3
USP16-201ENST00000334352 APOL6Q9BWW8 343 aa6.9□□□□□ -1.3
USP16-201ENST00000334352 BMP2KQ9NSY1 1161 aaPredicted RBP6.9□□□□□ -1.3
USP16-201ENST00000334352 DMAC2Q9NW81 257 aa6.9□□□□□ -1.3
USP16-201ENST00000334352 DPP3Q9NY33 737 aa6.9□□□□□ -1.3
USP16-201ENST00000334352 GCNT4Q9P109 453 aa6.9□□□□□ -1.3
USP16-201ENST00000334352 CDH9Q9ULB4 789 aa6.9□□□□□ -1.3
USP16-201ENST00000334352 MTMR6Q9Y217 621 aa6.9□□□□□ -1.3
USP16-201ENST00000334352 VWA3AA6NCI4 1184 aa6.9□□□□□ -1.31
USP16-201ENST00000334352 PP2D1A8MPX8 630 aa6.9□□□□□ -1.31
USP16-201ENST00000334352 SSBP05455 408 aaKnown RBP eCLIP6.9□□□□□ -1.31
USP16-201ENST00000334352 CXCL8P10145 99 aa6.9□□□□□ -1.31
USP16-201ENST00000334352 HMGA1P17096 107 aaKnown RBP6.9□□□□□ -1.31
USP16-201ENST00000334352 TGM1P22735 817 aa6.9□□□□□ -1.31
USP16-201ENST00000334352 MCM4P33991 863 aa6.9□□□□□ -1.31
USP16-201ENST00000334352 SLC7A9P82251 487 aa6.9□□□□□ -1.31
USP16-201ENST00000334352 RBP5P82980 135 aa6.9□□□□□ -1.31
USP16-201ENST00000334352 LMNB2Q03252 620 aa6.9□□□□□ -1.31
USP16-201ENST00000334352 PUM1Q14671 1186 aaKnown RBP eCLIP6.9□□□□□ -1.31
USP16-201ENST00000334352 E2F5Q15329 346 aa6.9□□□□□ -1.31
USP16-201ENST00000334352 TMEM196Q5HYL7 178 aa6.9□□□□□ -1.31
USP16-201ENST00000334352 TANGO2Q6ICL3 276 aa6.9□□□□□ -1.31
USP16-201ENST00000334352 FRMD5Q7Z6J6 570 aa6.9□□□□□ -1.31
USP16-201ENST00000334352 DDX42Q86XP3 938 aaKnown RBP eCLIP6.9□□□□□ -1.31
USP16-201ENST00000334352 CCDC65Q8IXS2 484 aa6.9□□□□□ -1.31
USP16-201ENST00000334352 OTUB2Q96DC9 234 aa6.9□□□□□ -1.31
USP16-201ENST00000334352 ZBTB45Q96K62 511 aaPredicted RBP6.9□□□□□ -1.31
USP16-201ENST00000334352 KIFC3Q9BVG8 833 aa6.9□□□□□ -1.31
USP16-201ENST00000334352 THG1LQ9NWX6 298 aaKnown RBP6.9□□□□□ -1.31
USP16-201ENST00000334352 PCDHB5Q9Y5E4 795 aa6.9□□□□□ -1.31
USP16-201ENST00000334352 MYMKA6NI61 221 aa6.89□□□□□ -1.31
USP16-201ENST00000334352 K7ENM7 598 aa6.89□□□□□ -1.31
USP16-201ENST00000334352 PMM2O15305 246 aa6.89□□□□□ -1.31
USP16-201ENST00000334352 KINO60870 393 aaKnown RBP6.89□□□□□ -1.31
USP16-201ENST00000334352 EPN2O95208 641 aa6.89□□□□□ -1.31
USP16-201ENST00000334352 ALDH1A3P47895 512 aa6.89□□□□□ -1.31
USP16-201ENST00000334352 GPC5P78333 572 aa6.89□□□□□ -1.31
USP16-201ENST00000334352 GUCY1B3Q02153 619 aa6.89□□□□□ -1.31
USP16-201ENST00000334352 TWF1Q12792 350 aa6.89□□□□□ -1.31
USP16-201ENST00000334352 CCINQ13939 588 aa6.89□□□□□ -1.31
USP16-201ENST00000334352 INTS6LQ5JSJ4 861 aaKnown RBP6.89□□□□□ -1.31
USP16-201ENST00000334352 ZC3H3Q8IXZ2 948 aaKnown RBP6.89□□□□□ -1.31
USP16-201ENST00000334352 SCML4Q8N228 414 aa6.89□□□□□ -1.31
USP16-201ENST00000334352 MYCT1Q8N699 235 aa6.89□□□□□ -1.31
USP16-201ENST00000334352 CEP120Q8N960 986 aa6.89□□□□□ -1.31
USP16-201ENST00000334352 LINC00301Q8NCQ3 95 aa6.89□□□□□ -1.31
USP16-201ENST00000334352 DDX1Q92499 740 aaKnown RBP6.89□□□□□ -1.31
USP16-201ENST00000334352 RUBCNQ92622 972 aa6.89□□□□□ -1.31
USP16-201ENST00000334352 PHOX2BQ99453 314 aa6.89□□□□□ -1.31
USP16-201ENST00000334352 BACH2Q9BYV9 841 aa6.89□□□□□ -1.31
USP16-201ENST00000334352 BDP1A6H8Y1 2624 aa6.89□□□□□ -1.31
USP16-201ENST00000334352 ANKRD63C9JTQ0 380 aa6.89□□□□□ -1.31
USP16-201ENST00000334352 K7ESF4 209 aa6.89□□□□□ -1.31
USP16-201ENST00000334352 ZNF263O14978 683 aa6.89□□□□□ -1.31
USP16-201ENST00000334352 RETP07949 1114 aa6.89□□□□□ -1.31
USP16-201ENST00000334352 RPL17P18621 184 aaKnown RBP6.89□□□□□ -1.31
USP16-201ENST00000334352 DRD1P21728 446 aa6.89□□□□□ -1.31
USP16-201ENST00000334352 TARSP26639 723 aaKnown RBP6.89□□□□□ -1.31
USP16-201ENST00000334352 CCR2P41597 374 aa6.89□□□□□ -1.31
USP16-201ENST00000334352 NLRP12P59046 1061 aa6.89□□□□□ -1.31
USP16-201ENST00000334352 CACNB1Q02641 598 aaPredicted RBP6.89□□□□□ -1.31
USP16-201ENST00000334352 MCM6Q14566 821 aa6.89□□□□□ -1.31
USP16-201ENST00000334352 NBR1Q14596 966 aa6.89□□□□□ -1.31
USP16-201ENST00000334352 RRAGBQ5VZM2 374 aa6.89□□□□□ -1.31
USP16-201ENST00000334352 UNC13DQ70J99 1090 aa6.89□□□□□ -1.31
USP16-201ENST00000334352 TMEM150AQ86TG1 271 aa6.89□□□□□ -1.31
USP16-201ENST00000334352 GPD1LQ8N335 351 aa6.89□□□□□ -1.31
USP16-201ENST00000334352 TTC39CQ8N584 583 aa6.89□□□□□ -1.31
USP16-201ENST00000334352 TMC2Q8TDI7 906 aa6.89□□□□□ -1.31
USP16-201ENST00000334352 CGRRF1Q99675 332 aa6.89□□□□□ -1.31
USP16-201ENST00000334352 SMOC2Q9H3U7 446 aa6.89□□□□□ -1.31
USP16-201ENST00000334352 PNPLA8Q9NP80 782 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms