RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 TUBB6Q9BUF5 446 aa15.41■□□□□ 0.06
SSBP3-201ENST00000326956 TRIM55Q9BYV6 548 aa15.41■□□□□ 0.06
SSBP3-201ENST00000326956 PARVAQ9NVD7 372 aa15.41■□□□□ 0.06
SSBP3-201ENST00000326956 CFAP69A5D8W1 941 aa15.41■□□□□ 0.06
SSBP3-201ENST00000326956 NVLO15381 856 aaKnown RBP15.41■□□□□ 0.06
SSBP3-201ENST00000326956 CYP1A1P04798 512 aaPredicted RBP15.41■□□□□ 0.06
SSBP3-201ENST00000326956 LINGO3P0C6S8 592 aa15.41■□□□□ 0.06
SSBP3-201ENST00000326956 UGCGQ16739 394 aa15.41■□□□□ 0.06
SSBP3-201ENST00000326956 RBBP8NLQ8NC74 664 aaPredicted RBP15.41■□□□□ 0.06
SSBP3-201ENST00000326956 FEZF2Q8TBJ5 459 aa15.41■□□□□ 0.06
SSBP3-201ENST00000326956 SH3GL3Q99963 347 aa15.41■□□□□ 0.06
SSBP3-201ENST00000326956 FEM1BQ9UK73 627 aa15.41■□□□□ 0.06
SSBP3-201ENST00000326956 DPPA5A6NC42 116 aa15.4■□□□□ 0.06
SSBP3-201ENST00000326956 ALOX15BO15296 676 aa15.4■□□□□ 0.06
SSBP3-201ENST00000326956 ECE2O60344 883 aa15.4■□□□□ 0.06
SSBP3-201ENST00000326956 HLA-DRAP01903 254 aa15.4■□□□□ 0.06
SSBP3-201ENST00000326956 OVGP1Q12889 678 aa15.4■□□□□ 0.06
SSBP3-201ENST00000326956 HIF1AQ16665 826 aa15.4■□□□□ 0.06
SSBP3-201ENST00000326956 NIPA1Q7RTP0 329 aa15.4■□□□□ 0.06
SSBP3-201ENST00000326956 CLNKQ7Z7G1 428 aa15.4■□□□□ 0.06
SSBP3-201ENST00000326956 OGFOD1Q8N543 542 aa15.4■□□□□ 0.06
SSBP3-201ENST00000326956 ALLCQ8N6M5 410 aa15.4■□□□□ 0.06
SSBP3-201ENST00000326956 SUPT20HQ8NEM7 779 aa15.4■□□□□ 0.06
SSBP3-201ENST00000326956 ZNF398Q8TD17 642 aa15.4■□□□□ 0.06
SSBP3-201ENST00000326956 SH3TC2Q8TF17 1288 aa15.4■□□□□ 0.06
SSBP3-201ENST00000326956 STMN2Q93045 179 aa15.4■□□□□ 0.06
SSBP3-201ENST00000326956 MAK16Q9BXY0 300 aaKnown RBP15.4■□□□□ 0.06
SSBP3-201ENST00000326956 ZNF219Q9P2Y4 722 aaPredicted RBP15.4■□□□□ 0.06
SSBP3-201ENST00000326956 SIPA1L1O43166 1804 aa15.4■□□□□ 0.06
SSBP3-201ENST00000326956 WDR64B1ANS9 1081 aa15.4■□□□□ 0.06
SSBP3-201ENST00000326956 GYG2O15488 501 aa15.4■□□□□ 0.06
SSBP3-201ENST00000326956 UPP2O95045 317 aa15.4■□□□□ 0.06
SSBP3-201ENST00000326956 ACADSP16219 412 aa15.4■□□□□ 0.06
SSBP3-201ENST00000326956 ADRA1DP25100 572 aa15.4■□□□□ 0.06
SSBP3-201ENST00000326956 DSG3P32926 999 aa15.4■□□□□ 0.06
SSBP3-201ENST00000326956 TMEM132AQ24JP5 1023 aa15.4■□□□□ 0.06
SSBP3-201ENST00000326956 SPDYAQ5MJ70 313 aa15.4■□□□□ 0.06
SSBP3-201ENST00000326956 TMEM154Q6P9G4 183 aa15.4■□□□□ 0.06
SSBP3-201ENST00000326956 DCUN1D2Q6PH85 259 aa15.4■□□□□ 0.06
SSBP3-201ENST00000326956 MFSD7Q6UXD7 560 aa15.4■□□□□ 0.06
SSBP3-201ENST00000326956 MCF2L2Q86YR7 1114 aa15.4■□□□□ 0.06
SSBP3-201ENST00000326956 CPXCR1Q8N123 301 aa15.4■□□□□ 0.06
SSBP3-201ENST00000326956 SPDYE1Q8NFV5 336 aaPredicted RBP15.4■□□□□ 0.06
SSBP3-201ENST00000326956 VCPIP1Q96JH7 1222 aa15.4■□□□□ 0.06
SSBP3-201ENST00000326956 HOMER2Q9NSB8 354 aa15.4■□□□□ 0.06
SSBP3-201ENST00000326956 ANKEF1Q9NU02 776 aa15.4■□□□□ 0.06
SSBP3-201ENST00000326956 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.4■□□□□ 0.06
SSBP3-201ENST00000326956 SHOC2Q9UQ13 582 aa15.4■□□□□ 0.06
SSBP3-201ENST00000326956 TRAFD1O14545 582 aaPredicted RBP15.4■□□□□ 0.06
SSBP3-201ENST00000326956 TYROBPO43914 113 aa15.4■□□□□ 0.06
SSBP3-201ENST00000326956 EIF2AK2P19525 551 aaKnown RBP15.4■□□□□ 0.06
SSBP3-201ENST00000326956 VHLP40337 213 aa15.4■□□□□ 0.06
SSBP3-201ENST00000326956 JAK3P52333 1124 aa15.4■□□□□ 0.06
SSBP3-201ENST00000326956 PPP1R2P3Q6NXS1 205 aa15.4■□□□□ 0.06
SSBP3-201ENST00000326956 CCDC62Q6P9F0 684 aa15.4■□□□□ 0.06
SSBP3-201ENST00000326956 SCYL3Q8IZE3 742 aa15.4■□□□□ 0.06
SSBP3-201ENST00000326956 ABRAQ8N0Z2 381 aa15.4■□□□□ 0.06
SSBP3-201ENST00000326956 ATP11CQ8NB49 1132 aa15.4■□□□□ 0.06
SSBP3-201ENST00000326956 PPFIBP2Q8ND30 876 aa15.4■□□□□ 0.06
SSBP3-201ENST00000326956 CEP170P1Q96L14 293 aa15.4■□□□□ 0.06
SSBP3-201ENST00000326956 FBXL18Q96ME1 805 aa15.4■□□□□ 0.06
SSBP3-201ENST00000326956 GOLGA8RI6L899 631 aa15.39■□□□□ 0.05
SSBP3-201ENST00000326956 ABLIM1O14639 778 aa15.39■□□□□ 0.05
SSBP3-201ENST00000326956 NOMO3P69849 1222 aa15.39■□□□□ 0.05
SSBP3-201ENST00000326956 GNPTABQ3T906 1256 aa15.39■□□□□ 0.05
SSBP3-201ENST00000326956 AP1ARQ63HQ0 302 aa15.39■□□□□ 0.05
SSBP3-201ENST00000326956 SPOPLQ6IQ16 392 aa15.39■□□□□ 0.05
SSBP3-201ENST00000326956 PALM2Q8IXS6 379 aa15.39■□□□□ 0.05
SSBP3-201ENST00000326956 PRMT6Q96LA8 375 aaPredicted RBP15.39■□□□□ 0.05
SSBP3-201ENST00000326956 SLITRK1Q96PX8 696 aa15.39■□□□□ 0.05
SSBP3-201ENST00000326956 HEY2Q9UBP5 337 aa15.39■□□□□ 0.05
SSBP3-201ENST00000326956 LNPEPQ9UIQ6 1025 aa15.39■□□□□ 0.05
SSBP3-201ENST00000326956 NFIBO00712 420 aa15.39■□□□□ 0.05
SSBP3-201ENST00000326956 SKIP12755 728 aa15.39■□□□□ 0.05
SSBP3-201ENST00000326956 LIG4P49917 911 aa15.39■□□□□ 0.05
SSBP3-201ENST00000326956 HSD17B4P51659 736 aa15.39■□□□□ 0.05
SSBP3-201ENST00000326956 ARFIP2P53365 341 aa15.39■□□□□ 0.05
SSBP3-201ENST00000326956 VCPP55072 806 aaKnown RBP15.39■□□□□ 0.05
SSBP3-201ENST00000326956 ARL4CP56559 192 aa15.39■□□□□ 0.05
SSBP3-201ENST00000326956 PLEKHA7Q6IQ23 1121 aa15.39■□□□□ 0.05
SSBP3-201ENST00000326956 C4orf50Q6ZRC1 276 aa15.39■□□□□ 0.05
SSBP3-201ENST00000326956 PCGF5Q86SE9 256 aa15.39■□□□□ 0.05
SSBP3-201ENST00000326956 ZBTB10Q96DT7 871 aa15.39■□□□□ 0.05
SSBP3-201ENST00000326956 MANSC1Q9H8J5 431 aa15.39■□□□□ 0.05
SSBP3-201ENST00000326956 COL20A1Q9P218 1284 aa15.39■□□□□ 0.05
SSBP3-201ENST00000326956 IKBKGQ9Y6K9 419 aa15.39■□□□□ 0.05
SSBP3-201ENST00000326956 GARTP22102 1010 aa15.38■□□□□ 0.05
SSBP3-201ENST00000326956 SOX10P56693 466 aa15.38■□□□□ 0.05
SSBP3-201ENST00000326956 FKBP1AP62942 108 aaKnown RBP15.38■□□□□ 0.05
SSBP3-201ENST00000326956 C1QBPQ07021 282 aaKnown RBP15.38■□□□□ 0.05
SSBP3-201ENST00000326956 MCL1Q07820 350 aa15.38■□□□□ 0.05
SSBP3-201ENST00000326956 SPP2Q13103 211 aa15.38■□□□□ 0.05
SSBP3-201ENST00000326956 RCN1Q15293 331 aa15.38■□□□□ 0.05
SSBP3-201ENST00000326956 MAPK6Q16659 721 aa15.38■□□□□ 0.05
SSBP3-201ENST00000326956 KLHL38Q2WGJ6 581 aa15.38■□□□□ 0.05
SSBP3-201ENST00000326956 SLC39A4Q6P5W5 647 aa15.38■□□□□ 0.05
SSBP3-201ENST00000326956 APLFQ8IW19 511 aaPredicted RBP15.38■□□□□ 0.05
SSBP3-201ENST00000326956 BTBD10Q9BSF8 475 aa15.38■□□□□ 0.05
SSBP3-201ENST00000326956 TMEM121Q9BTD3 319 aa15.38■□□□□ 0.05
SSBP3-201ENST00000326956 ALG13Q9NP73 1137 aaKnown RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms