RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 CFAP61Q8NHU2 1237 aa18.86■□□□□ 0.61
PRKCB-202ENST00000321728 GORASP1Q9BQQ3 440 aa18.86■□□□□ 0.61
PRKCB-202ENST00000321728 RAB20Q9NX57 234 aa18.86■□□□□ 0.61
PRKCB-202ENST00000321728 A0A1B0GVG6 124 aa18.86■□□□□ 0.61
PRKCB-202ENST00000321728 SMAPO00193 183 aa18.86■□□□□ 0.61
PRKCB-202ENST00000321728 RNF8O76064 485 aa18.86■□□□□ 0.61
PRKCB-202ENST00000321728 GPC3P51654 580 aa18.86■□□□□ 0.61
PRKCB-202ENST00000321728 GEMIN4P57678 1058 aaKnown RBP18.86■□□□□ 0.61
PRKCB-202ENST00000321728 PTP4A2Q12974 167 aa18.86■□□□□ 0.61
PRKCB-202ENST00000321728 CUL3Q13618 768 aa18.86■□□□□ 0.61
PRKCB-202ENST00000321728 EFTUD2Q15029 972 aaKnown RBP eCLIP18.86■□□□□ 0.61
PRKCB-202ENST00000321728 SLC5A9Q2M3M2 681 aa18.86■□□□□ 0.61
PRKCB-202ENST00000321728 KATNAL2Q8IYT4 538 aa18.86■□□□□ 0.61
PRKCB-202ENST00000321728 ZNF184Q99676 751 aaPredicted RBP18.86■□□□□ 0.61
PRKCB-202ENST00000321728 DDX50Q9BQ39 737 aaKnown RBP18.86■□□□□ 0.61
PRKCB-202ENST00000321728 ZC3H12CQ9C0D7 883 aaKnown RBP18.86■□□□□ 0.61
PRKCB-202ENST00000321728 TAS2R1Q9NYW7 299 aa18.86■□□□□ 0.61
PRKCB-202ENST00000321728 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.86■□□□□ 0.61
PRKCB-202ENST00000321728 WASF2Q9Y6W5 498 aa18.86■□□□□ 0.61
PRKCB-202ENST00000321728 GREB1LQ9C091 1923 aaPredicted RBP18.85■□□□□ 0.61
PRKCB-202ENST00000321728 PPEF1O14829 653 aaPredicted RBP18.85■□□□□ 0.61
PRKCB-202ENST00000321728 PMM2O15305 246 aa18.85■□□□□ 0.61
PRKCB-202ENST00000321728 LIASO43766 372 aa18.85■□□□□ 0.61
PRKCB-202ENST00000321728 ZBED4O75132 1171 aa18.85■□□□□ 0.61
PRKCB-202ENST00000321728 CRY2Q49AN0 593 aa18.85■□□□□ 0.61
PRKCB-202ENST00000321728 TRIM11Q96F44 468 aa18.85■□□□□ 0.61
PRKCB-202ENST00000321728 C11orf70Q9BRQ4 267 aa18.85■□□□□ 0.61
PRKCB-202ENST00000321728 TSSK1BQ9BXA7 367 aa18.85■□□□□ 0.61
PRKCB-202ENST00000321728 TMEM8AQ9HCN3 771 aa18.85■□□□□ 0.61
PRKCB-202ENST00000321728 ZBTB21Q9ULJ3 1066 aa18.85■□□□□ 0.61
PRKCB-202ENST00000321728 UMODL1Q5DID0 1318 aa18.85■□□□□ 0.61
PRKCB-202ENST00000321728 IPO5O00410 1097 aaKnown RBP18.85■□□□□ 0.61
PRKCB-202ENST00000321728 ALOX15BO15296 676 aa18.85■□□□□ 0.61
PRKCB-202ENST00000321728 IFNB1P01574 187 aa18.85■□□□□ 0.61
PRKCB-202ENST00000321728 EXD1Q8NHP7 514 aa18.85■□□□□ 0.61
PRKCB-202ENST00000321728 GATA6Q92908 595 aa18.85■□□□□ 0.61
PRKCB-202ENST00000321728 TMEM120AQ9BXJ8 343 aa18.85■□□□□ 0.61
PRKCB-202ENST00000321728 SLC17A7Q9P2U7 560 aa18.85■□□□□ 0.61
PRKCB-202ENST00000321728 PRR12Q9ULL5 1215 aa18.85■□□□□ 0.61
PRKCB-202ENST00000321728 ZCCHC18P0CG32 403 aa18.84■□□□□ 0.61
PRKCB-202ENST00000321728 ERFP50548 548 aa18.84■□□□□ 0.61
PRKCB-202ENST00000321728 PEX3P56589 373 aa18.84■□□□□ 0.61
PRKCB-202ENST00000321728 NFX1Q12986 1120 aaKnown RBP18.84■□□□□ 0.61
PRKCB-202ENST00000321728 ATP13A4Q4VNC1 1196 aa18.84■□□□□ 0.61
PRKCB-202ENST00000321728 CCDC174Q6PII3 467 aa18.84■□□□□ 0.61
PRKCB-202ENST00000321728 PTPRN2Q92932 1015 aa18.84■□□□□ 0.61
PRKCB-202ENST00000321728 HAUS1Q96CS2 278 aa18.84■□□□□ 0.61
PRKCB-202ENST00000321728 TIPINQ9BVW5 301 aa18.84■□□□□ 0.61
PRKCB-202ENST00000321728 ZNF212Q9UDV6 495 aa18.84■□□□□ 0.61
PRKCB-202ENST00000321728 C2orf71A6NGG8 1288 aa18.84■□□□□ 0.61
PRKCB-202ENST00000321728 POLR2MP0CAP2 368 aa18.84■□□□□ 0.61
PRKCB-202ENST00000321728 PGM1P36871 562 aa18.84■□□□□ 0.61
PRKCB-202ENST00000321728 PLCB3Q01970 1234 aa18.84■□□□□ 0.61
PRKCB-202ENST00000321728 MORF4L2Q15014 288 aa18.84■□□□□ 0.61
PRKCB-202ENST00000321728 ZYXQ15942 572 aaKnown RBP18.84■□□□□ 0.61
PRKCB-202ENST00000321728 PASD1Q8IV76 773 aa18.84■□□□□ 0.61
PRKCB-202ENST00000321728 KBTBD2Q8IY47 623 aa18.84■□□□□ 0.61
PRKCB-202ENST00000321728 SPIRE2Q8WWL2 714 aa18.84■□□□□ 0.61
PRKCB-202ENST00000321728 TEKT1Q969V4 418 aa18.84■□□□□ 0.61
PRKCB-202ENST00000321728 GMCL1Q96IK5 515 aa18.84■□□□□ 0.61
PRKCB-202ENST00000321728 KRT82Q9NSB4 513 aa18.84■□□□□ 0.61
PRKCB-202ENST00000321728 PCMTD2Q9NV79 361 aa18.84■□□□□ 0.61
PRKCB-202ENST00000321728 PDP2Q9P2J9 529 aa18.84■□□□□ 0.61
PRKCB-202ENST00000321728 SSTR1P30872 391 aa18.83■□□□□ 0.61
PRKCB-202ENST00000321728 SSTR3P32745 418 aaPredicted RBP18.83■□□□□ 0.61
PRKCB-202ENST00000321728 TFDP1Q14186 410 aa18.83■□□□□ 0.61
PRKCB-202ENST00000321728 EAPPQ56P03 285 aaPredicted RBP18.83■□□□□ 0.61
PRKCB-202ENST00000321728 LIN9Q5TKA1 542 aa18.83■□□□□ 0.61
PRKCB-202ENST00000321728 RASIP1Q5U651 963 aa18.83■□□□□ 0.61
PRKCB-202ENST00000321728 SH3BP5LQ7L8J4 393 aa18.83■□□□□ 0.61
PRKCB-202ENST00000321728 MIER3Q7Z3K6 550 aa18.83■□□□□ 0.61
PRKCB-202ENST00000321728 FAM84AQ96KN4 292 aa18.83■□□□□ 0.61
PRKCB-202ENST00000321728 PPCSQ9HAB8 311 aa18.83■□□□□ 0.61
PRKCB-202ENST00000321728 IRAK4Q9NWZ3 460 aa18.83■□□□□ 0.61
PRKCB-202ENST00000321728 MYPNQ86TC9 1320 aa18.83■□□□□ 0.6
PRKCB-202ENST00000321728 MAPTP10636 758 aaKnown RBP18.83■□□□□ 0.6
PRKCB-202ENST00000321728 CPA2P48052 419 aa18.83■□□□□ 0.6
PRKCB-202ENST00000321728 CDK16Q00536 496 aa18.83■□□□□ 0.6
PRKCB-202ENST00000321728 TTC7BQ86TV6 843 aa18.83■□□□□ 0.6
PRKCB-202ENST00000321728 ALLCQ8N6M5 410 aa18.83■□□□□ 0.6
PRKCB-202ENST00000321728 FAM161BQ96MY7 647 aa18.83■□□□□ 0.6
PRKCB-202ENST00000321728 EPAS1Q99814 870 aa18.83■□□□□ 0.6
PRKCB-202ENST00000321728 SSU72Q9NP77 194 aaKnown RBP18.83■□□□□ 0.6
PRKCB-202ENST00000321728 GPRC5CQ9NQ84 441 aa18.83■□□□□ 0.6
PRKCB-202ENST00000321728 ARMCX1Q9P291 453 aa18.83■□□□□ 0.6
PRKCB-202ENST00000321728 SUGT1Q9Y2Z0 365 aa18.83■□□□□ 0.6
PRKCB-202ENST00000321728 MTO1Q9Y2Z2 717 aaKnown RBP18.83■□□□□ 0.6
PRKCB-202ENST00000321728 COQ4Q9Y3A0 265 aa18.83■□□□□ 0.6
PRKCB-202ENST00000321728 AMPD1P23109 780 aa18.82■□□□□ 0.6
PRKCB-202ENST00000321728 NEK3P51956 506 aa18.82■□□□□ 0.6
PRKCB-202ENST00000321728 GPX6P59796 221 aa18.82■□□□□ 0.6
PRKCB-202ENST00000321728 GTF2BQ00403 316 aa18.82■□□□□ 0.6
PRKCB-202ENST00000321728 EFHC2Q5JST6 749 aa18.82■□□□□ 0.6
PRKCB-202ENST00000321728 TMEM179Q6ZVK1 233 aa18.82■□□□□ 0.6
PRKCB-202ENST00000321728 OGFOD1Q8N543 542 aa18.82■□□□□ 0.6
PRKCB-202ENST00000321728 ZNF276Q8N554 614 aa18.82■□□□□ 0.6
PRKCB-202ENST00000321728 GMCL1P1Q8NEA9 526 aa18.82■□□□□ 0.6
PRKCB-202ENST00000321728 PYROXD1Q8WU10 500 aa18.82■□□□□ 0.6
PRKCB-202ENST00000321728 BICD1Q96G01 975 aa18.82■□□□□ 0.6
PRKCB-202ENST00000321728 VPS11Q9H270 941 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms