RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 POLNQ7Z5Q5 900 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 USP6NLQ92738 828 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 KATNAL1Q9BW62 490 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 KLHL4Q9C0H6 718 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 ILKAPQ9H0C8 392 aaPredicted RBP9.22□□□□□ -0.93
COL6A5-202ENST00000312481 MANSC1Q9H8J5 431 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 BCL9LQ86UU0 1499 aa9.21□□□□□ -0.93
COL6A5-202ENST00000312481 A0A0G2JND7 137 aa9.21□□□□□ -0.93
COL6A5-202ENST00000312481 ASB14A6NK59 587 aa9.21□□□□□ -0.93
COL6A5-202ENST00000312481 AHCYL1O43865 530 aa9.21□□□□□ -0.93
COL6A5-202ENST00000312481 SCARA3Q6AZY7 606 aa9.21□□□□□ -0.93
COL6A5-202ENST00000312481 NOD2Q9HC29 1040 aa9.21□□□□□ -0.93
COL6A5-202ENST00000312481 DSEQ9UL01 958 aa9.21□□□□□ -0.93
COL6A5-202ENST00000312481 TMEM120BA0PK00 339 aa9.21□□□□□ -0.93
COL6A5-202ENST00000312481 SNX2O60749 519 aa9.21□□□□□ -0.93
COL6A5-202ENST00000312481 RASSF9O75901 435 aa9.21□□□□□ -0.93
COL6A5-202ENST00000312481 ALADP13716 330 aa9.21□□□□□ -0.93
COL6A5-202ENST00000312481 SOX6P35712 828 aa9.21□□□□□ -0.93
COL6A5-202ENST00000312481 SREBF1P36956 1147 aa9.21□□□□□ -0.93
COL6A5-202ENST00000312481 RGS4P49798 205 aa9.21□□□□□ -0.93
COL6A5-202ENST00000312481 GPC3P51654 580 aa9.21□□□□□ -0.93
COL6A5-202ENST00000312481 TSPY1Q01534 308 aa9.21□□□□□ -0.93
COL6A5-202ENST00000312481 BNC1Q01954 994 aa9.21□□□□□ -0.93
COL6A5-202ENST00000312481 EIF2B5Q13144 721 aaKnown RBP9.21□□□□□ -0.93
COL6A5-202ENST00000312481 MAD2L1Q13257 205 aaPredicted RBP9.21□□□□□ -0.93
COL6A5-202ENST00000312481 STX3Q13277 289 aa9.21□□□□□ -0.93
COL6A5-202ENST00000312481 KLHDC7AQ5VTJ3 777 aa9.21□□□□□ -0.93
COL6A5-202ENST00000312481 FAM167BQ9BTA0 163 aa9.21□□□□□ -0.93
COL6A5-202ENST00000312481 PIKFYVEQ9Y2I7 2098 aa9.21□□□□□ -0.93
COL6A5-202ENST00000312481 SORBS3O60504 671 aa9.21□□□□□ -0.93
COL6A5-202ENST00000312481 KCNA3P22001 575 aa9.21□□□□□ -0.93
COL6A5-202ENST00000312481 FBLN1P23142 703 aa9.21□□□□□ -0.93
COL6A5-202ENST00000312481 BARGINQ6ZT62 677 aa9.21□□□□□ -0.93
COL6A5-202ENST00000312481 FASTKD5Q7L8L6 764 aaKnown RBP9.21□□□□□ -0.93
COL6A5-202ENST00000312481 SLC13A5Q86YT5 568 aaPredicted RBP9.21□□□□□ -0.93
COL6A5-202ENST00000312481 TMEM109Q9BVC6 243 aa9.21□□□□□ -0.93
COL6A5-202ENST00000312481 CATSPERBQ9H7T0 1116 aa9.21□□□□□ -0.93
COL6A5-202ENST00000312481 C6orf203Q9P0P8 240 aaPredicted RBP9.21□□□□□ -0.93
COL6A5-202ENST00000312481 KLHL8Q9P2G9 620 aaPredicted RBP9.21□□□□□ -0.93
COL6A5-202ENST00000312481 AAR2Q9Y312 384 aaKnown RBP9.21□□□□□ -0.93
COL6A5-202ENST00000312481 TYK2P29597 1187 aa9.21□□□□□ -0.94
COL6A5-202ENST00000312481 PIK3CGP48736 1102 aa9.21□□□□□ -0.94
COL6A5-202ENST00000312481 MEI1Q5TIA1 1274 aa9.21□□□□□ -0.94
COL6A5-202ENST00000312481 TIGD7Q6NT04 549 aaPredicted RBP9.21□□□□□ -0.94
COL6A5-202ENST00000312481 RDH11Q8TC12 318 aa9.21□□□□□ -0.94
COL6A5-202ENST00000312481 PIGOQ8TEQ8 1089 aa9.21□□□□□ -0.94
COL6A5-202ENST00000312481 ORAI2Q96SN7 254 aa9.21□□□□□ -0.94
COL6A5-202ENST00000312481 GDF3Q9NR23 364 aa9.21□□□□□ -0.94
COL6A5-202ENST00000312481 RBAKQ9NYW8 714 aaPredicted RBP9.21□□□□□ -0.94
COL6A5-202ENST00000312481 ZBTB21Q9ULJ3 1066 aa9.21□□□□□ -0.94
COL6A5-202ENST00000312481 A0A1B0GUL6 1792 aa9.21□□□□□ -0.94
COL6A5-202ENST00000312481 XPO1O14980 1071 aaKnown RBP9.21□□□□□ -0.94
COL6A5-202ENST00000312481 LARGE1O95461 756 aa9.21□□□□□ -0.94
COL6A5-202ENST00000312481 WEE2P0C1S8 567 aa9.21□□□□□ -0.94
COL6A5-202ENST00000312481 ANKRD40Q6AI12 368 aa9.21□□□□□ -0.94
COL6A5-202ENST00000312481 TTC27Q6P3X3 843 aa9.21□□□□□ -0.94
COL6A5-202ENST00000312481 LRRC47Q8N1G4 583 aaKnown RBP9.21□□□□□ -0.94
COL6A5-202ENST00000312481 ZNF513Q8N8E2 541 aaPredicted RBP9.21□□□□□ -0.94
COL6A5-202ENST00000312481 MED10Q9BTT4 135 aa9.21□□□□□ -0.94
COL6A5-202ENST00000312481 C3orf70A6NLC5 250 aaPredicted RBP9.21□□□□□ -0.94
COL6A5-202ENST00000312481 RBP1P09455 135 aa9.21□□□□□ -0.94
COL6A5-202ENST00000312481 PROSER3Q2NL68 480 aa9.21□□□□□ -0.94
COL6A5-202ENST00000312481 SLC10A5Q5PT55 438 aa9.21□□□□□ -0.94
COL6A5-202ENST00000312481 SMCR8Q8TEV9 937 aaPredicted RBP9.21□□□□□ -0.94
COL6A5-202ENST00000312481 THAP1Q9NVV9 213 aa9.21□□□□□ -0.94
COL6A5-202ENST00000312481 ZC3H7BQ9UGR2 993 aaKnown RBP9.21□□□□□ -0.94
COL6A5-202ENST00000312481 OXCT1P55809 520 aa9.21□□□□□ -0.94
COL6A5-202ENST00000312481 TFAMQ00059 246 aaKnown RBP9.21□□□□□ -0.94
COL6A5-202ENST00000312481 RNF43Q68DV7 783 aa9.21□□□□□ -0.94
COL6A5-202ENST00000312481 CNBD2Q96M20 576 aa9.21□□□□□ -0.94
COL6A5-202ENST00000312481 KNL1Q8NG31 2342 aa9.21□□□□□ -0.94
COL6A5-202ENST00000312481 CXCR5P32302 372 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 AIF1P55008 147 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 HP1BP3Q5SSJ5 553 aaPredicted RBP9.2□□□□□ -0.94
COL6A5-202ENST00000312481 ZNF772Q68DY9 489 aaPredicted RBP9.2□□□□□ -0.94
COL6A5-202ENST00000312481 SPATA20Q8TB22 786 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 NIF3L1Q9GZT8 377 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 KCNQ5Q9NR82 932 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 RABGEF1Q9UJ41 708 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 AGO2Q9UKV8 859 aaKnown RBP9.2□□□□□ -0.94
COL6A5-202ENST00000312481 SERPINB1P30740 379 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 SNRNP35Q16560 246 aaKnown RBP9.2□□□□□ -0.94
COL6A5-202ENST00000312481 AGAP9Q5VTM2 703 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 ERO1BQ86YB8 467 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 RMDN3Q96TC7 470 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 SCN3BQ9NY72 215 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 ADAM28Q9UKQ2 775 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 CCDC189A1A4V9 331 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 SUPT3HO75486 399 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 DNAJB1P25685 340 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 GALCP54803 685 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 CDK18Q07002 472 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 TRIM67Q6ZTA4 783 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 C15orf52Q6ZUT6 534 aaKnown RBP9.2□□□□□ -0.94
COL6A5-202ENST00000312481 HAUS6Q7Z4H7 955 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 SMYD4Q8IYR2 804 aaPredicted RBP9.2□□□□□ -0.94
COL6A5-202ENST00000312481 FAM163AQ96GL9 167 aaPredicted RBP9.2□□□□□ -0.94
COL6A5-202ENST00000312481 LRRC1Q9BTT6 524 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 TUBA4AP68366 448 aa9.2□□□□□ -0.94
COL6A5-202ENST00000312481 BBS9Q3SYG4 887 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms