RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 FAM153BP0C7A2 387 aa23.87■■□□□ 1.41
PDLIM2-202ENST00000308354 PRKAR2AP13861 404 aaKnown RBP23.87■■□□□ 1.41
PDLIM2-202ENST00000308354 CRYBB1P53674 252 aaPredicted RBP23.87■■□□□ 1.41
PDLIM2-202ENST00000308354 PAK2Q13177 524 aa23.87■■□□□ 1.41
PDLIM2-202ENST00000308354 FAM153CQ494X1 144 aa23.87■■□□□ 1.41
PDLIM2-202ENST00000308354 DAB2IPQ5VWQ8 1189 aa23.87■■□□□ 1.41
PDLIM2-202ENST00000308354 TSEN2Q8NCE0 465 aaKnown RBP23.87■■□□□ 1.41
PDLIM2-202ENST00000308354 WNT8BQ93098 351 aa23.87■■□□□ 1.41
PDLIM2-202ENST00000308354 SPC25Q9HBM1 224 aa23.87■■□□□ 1.41
PDLIM2-202ENST00000308354 FAM153AQ9UHL3 310 aa23.87■■□□□ 1.41
PDLIM2-202ENST00000308354 ITGA11Q9UKX5 1188 aa23.87■■□□□ 1.41
PDLIM2-202ENST00000308354 TTC7AQ9ULT0 858 aaPredicted RBP23.87■■□□□ 1.41
PDLIM2-202ENST00000308354 GOLGA6BA6NDN3 693 aa23.87■■□□□ 1.41
PDLIM2-202ENST00000308354 YARSP54577 528 aaKnown RBP23.87■■□□□ 1.41
PDLIM2-202ENST00000308354 RAD23BP54727 409 aa23.87■■□□□ 1.41
PDLIM2-202ENST00000308354 RBP5P82980 135 aa23.87■■□□□ 1.41
PDLIM2-202ENST00000308354 PTP4A2Q12974 167 aa23.87■■□□□ 1.41
PDLIM2-202ENST00000308354 WHAMMQ8TF30 809 aa23.87■■□□□ 1.41
PDLIM2-202ENST00000308354 RPS6KC1Q96S38 1066 aa23.87■■□□□ 1.41
PDLIM2-202ENST00000308354 XPNPEP3Q9NQH7 507 aa23.87■■□□□ 1.41
PDLIM2-202ENST00000308354 AVENQ9NQS1 362 aaPredicted RBP23.87■■□□□ 1.41
PDLIM2-202ENST00000308354 GTF2IRD1Q9UHL9 959 aa23.87■■□□□ 1.41
PDLIM2-202ENST00000308354 NR2E1Q9Y466 385 aa23.87■■□□□ 1.41
PDLIM2-202ENST00000308354 TRPA1O75762 1119 aa23.86■■□□□ 1.41
PDLIM2-202ENST00000308354 CTSHP09668 335 aa23.86■■□□□ 1.41
PDLIM2-202ENST00000308354 MYBL1P10243 752 aa23.86■■□□□ 1.41
PDLIM2-202ENST00000308354 ATICP31939 592 aa23.86■■□□□ 1.41
PDLIM2-202ENST00000308354 APBB1IPQ7Z5R6 666 aaPredicted RBP23.86■■□□□ 1.41
PDLIM2-202ENST00000308354 PHF13Q86YI8 300 aaPredicted RBP23.86■■□□□ 1.41
PDLIM2-202ENST00000308354 WDTC1Q8N5D0 677 aa23.86■■□□□ 1.41
PDLIM2-202ENST00000308354 TRIM11Q96F44 468 aa23.86■■□□□ 1.41
PDLIM2-202ENST00000308354 YWHAEP62258 255 aaKnown RBP23.86■■□□□ 1.41
PDLIM2-202ENST00000308354 UBL4BQ8N7F7 174 aa23.86■■□□□ 1.41
PDLIM2-202ENST00000308354 CD101Q93033 1021 aa23.86■■□□□ 1.41
PDLIM2-202ENST00000308354 CELF4Q9BZC1 486 aaKnown RBP23.86■■□□□ 1.41
PDLIM2-202ENST00000308354 ELOVL4Q9GZR5 314 aa23.86■■□□□ 1.41
PDLIM2-202ENST00000308354 AMACRQ9UHK6 382 aa23.86■■□□□ 1.41
PDLIM2-202ENST00000308354 KPNA6O60684 536 aa23.85■■□□□ 1.41
PDLIM2-202ENST00000308354 RNF40O75150 1001 aa23.85■■□□□ 1.41
PDLIM2-202ENST00000308354 ADAMTS4O75173 837 aa23.85■■□□□ 1.41
PDLIM2-202ENST00000308354 PEX5P50542 639 aa23.85■■□□□ 1.41
PDLIM2-202ENST00000308354 MAMLD1Q13495 774 aa23.85■■□□□ 1.41
PDLIM2-202ENST00000308354 PCBP1Q15365 356 aaKnown RBP eCLIP23.85■■□□□ 1.41
PDLIM2-202ENST00000308354 UBXN11Q5T124 520 aa23.85■■□□□ 1.41
PDLIM2-202ENST00000308354 LIN9Q5TKA1 542 aa23.85■■□□□ 1.41
PDLIM2-202ENST00000308354 DENND1BQ6P3S1 775 aa23.85■■□□□ 1.41
PDLIM2-202ENST00000308354 CD302Q8IX05 232 aa23.85■■□□□ 1.41
PDLIM2-202ENST00000308354 NME8Q8N427 588 aa23.85■■□□□ 1.41
PDLIM2-202ENST00000308354 SLC4A11Q8NBS3 891 aa23.85■■□□□ 1.41
PDLIM2-202ENST00000308354 UPF3AQ9H1J1 476 aaKnown RBP23.85■■□□□ 1.41
PDLIM2-202ENST00000308354 PLEKHA5Q9HAU0 1116 aa23.85■■□□□ 1.41
PDLIM2-202ENST00000308354 PARP2Q9UGN5 583 aa23.85■■□□□ 1.41
PDLIM2-202ENST00000308354 MIF4GDA9UHW6 222 aaKnown RBP23.84■■□□□ 1.41
PDLIM2-202ENST00000308354 ASGR1P07306 291 aa23.84■■□□□ 1.41
PDLIM2-202ENST00000308354 MMP8P22894 467 aa23.84■■□□□ 1.41
PDLIM2-202ENST00000308354 TAF2Q6P1X5 1199 aa23.84■■□□□ 1.41
PDLIM2-202ENST00000308354 DPH6Q7L8W6 267 aa23.84■■□□□ 1.41
PDLIM2-202ENST00000308354 VRTNQ9H8Y1 702 aa23.84■■□□□ 1.41
PDLIM2-202ENST00000308354 CILPO75339 1184 aa23.84■■□□□ 1.41
PDLIM2-202ENST00000308354 LLGL1Q15334 1064 aa23.84■■□□□ 1.41
PDLIM2-202ENST00000308354 KCNA10Q16322 511 aa23.84■■□□□ 1.41
PDLIM2-202ENST00000308354 FAM228AQ86W67 206 aa23.84■■□□□ 1.41
PDLIM2-202ENST00000308354 NT5DC4Q86YG4 428 aa23.84■■□□□ 1.41
PDLIM2-202ENST00000308354 WNT8AQ9H1J5 351 aa23.84■■□□□ 1.41
PDLIM2-202ENST00000308354 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.84■■□□□ 1.41
PDLIM2-202ENST00000308354 CDY2AQ9Y6F7 541 aa23.84■■□□□ 1.41
PDLIM2-202ENST00000308354 MYO1FO00160 1098 aa23.83■■□□□ 1.41
PDLIM2-202ENST00000308354 AXLP30530 894 aa23.83■■□□□ 1.41
PDLIM2-202ENST00000308354 C1QBPQ07021 282 aaKnown RBP23.83■■□□□ 1.41
PDLIM2-202ENST00000308354 NNTQ13423 1086 aa23.83■■□□□ 1.41
PDLIM2-202ENST00000308354 ALKAL1Q6UXT8 129 aa23.83■■□□□ 1.41
PDLIM2-202ENST00000308354 TMEM35BQ8NCS4 154 aa23.83■■□□□ 1.41
PDLIM2-202ENST00000308354 CD99L2Q8TCZ2 262 aa23.83■■□□□ 1.41
PDLIM2-202ENST00000308354 SLITRK6Q9H5Y7 841 aa23.83■■□□□ 1.41
PDLIM2-202ENST00000308354 PYGMP11217 842 aa23.83■■□□□ 1.4
PDLIM2-202ENST00000308354 P4HA1P13674 534 aa23.83■■□□□ 1.4
PDLIM2-202ENST00000308354 MRPS6P82932 125 aaKnown RBP23.83■■□□□ 1.4
PDLIM2-202ENST00000308354 ZBTB6Q15916 424 aa23.83■■□□□ 1.4
PDLIM2-202ENST00000308354 CYP4A22Q5TCH4 519 aa23.83■■□□□ 1.4
PDLIM2-202ENST00000308354 TWF2Q6IBS0 349 aaKnown RBP23.83■■□□□ 1.4
PDLIM2-202ENST00000308354 VCPIP1Q96JH7 1222 aa23.83■■□□□ 1.4
PDLIM2-202ENST00000308354 CTNNA1P35221 906 aaKnown RBP23.82■■□□□ 1.4
PDLIM2-202ENST00000308354 RPL7AP62424 266 aaKnown RBP23.82■■□□□ 1.4
PDLIM2-202ENST00000308354 PLEKHA7Q6IQ23 1121 aa23.82■■□□□ 1.4
PDLIM2-202ENST00000308354 SESTD1Q86VW0 696 aa23.82■■□□□ 1.4
PDLIM2-202ENST00000308354 DDX42Q86XP3 938 aaKnown RBP eCLIP23.82■■□□□ 1.4
PDLIM2-202ENST00000308354 TMEM176AQ96HP8 235 aa23.82■■□□□ 1.4
PDLIM2-202ENST00000308354 ZMYND15Q9H091 742 aa23.82■■□□□ 1.4
PDLIM2-202ENST00000308354 ERVK-5Q9HDB9 667 aa23.82■■□□□ 1.4
PDLIM2-202ENST00000308354 TJP2Q9UDY2 1190 aa23.82■■□□□ 1.4
PDLIM2-202ENST00000308354 CYTH4Q9UIA0 394 aa23.82■■□□□ 1.4
PDLIM2-202ENST00000308354 PCDHGC3Q9UN70 934 aa23.82■■□□□ 1.4
PDLIM2-202ENST00000308354 IPPQ9Y573 584 aa23.82■■□□□ 1.4
PDLIM2-202ENST00000308354 SNX9Q9Y5X1 595 aa23.82■■□□□ 1.4
PDLIM2-202ENST00000308354 SCN10AQ9Y5Y9 1956 aa23.82■■□□□ 1.4
PDLIM2-202ENST00000308354 TTI1O43156 1089 aa23.82■■□□□ 1.4
PDLIM2-202ENST00000308354 LSM8O95777 96 aaKnown RBP23.82■■□□□ 1.4
PDLIM2-202ENST00000308354 NDST1P52848 882 aa23.82■■□□□ 1.4
PDLIM2-202ENST00000308354 PTPN11Q06124 597 aaPredicted RBP23.82■■□□□ 1.4
PDLIM2-202ENST00000308354 NFX1Q12986 1120 aaKnown RBP23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms