RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 RAD23BP54727 409 aa20.61■□□□□ 0.89
HOXC4-201ENST00000303406 INCA1Q0VD86 236 aa20.61■□□□□ 0.89
HOXC4-201ENST00000303406 MTMR3Q13615 1198 aa20.61■□□□□ 0.89
HOXC4-201ENST00000303406 TRADDQ15628 312 aa20.61■□□□□ 0.89
HOXC4-201ENST00000303406 PPP1R15BQ5SWA1 713 aa20.61■□□□□ 0.89
HOXC4-201ENST00000303406 CFAP58Q5T655 872 aa20.61■□□□□ 0.89
HOXC4-201ENST00000303406 LRRC38Q5VT99 294 aa20.61■□□□□ 0.89
HOXC4-201ENST00000303406 LRIG3Q6UXM1 1119 aa20.61■□□□□ 0.89
HOXC4-201ENST00000303406 ERICH1Q86X53 443 aa20.61■□□□□ 0.89
HOXC4-201ENST00000303406 ZDHHC14Q8IZN3 488 aa20.61■□□□□ 0.89
HOXC4-201ENST00000303406 C3orf20Q8ND61 904 aa20.61■□□□□ 0.89
HOXC4-201ENST00000303406 TFAP2BQ92481 460 aa20.61■□□□□ 0.89
HOXC4-201ENST00000303406 RUFY1Q96T51 708 aa20.61■□□□□ 0.89
HOXC4-201ENST00000303406 CELF4Q9BZC1 486 aaKnown RBP20.61■□□□□ 0.89
HOXC4-201ENST00000303406 TRIM7Q9C029 511 aa20.61■□□□□ 0.89
HOXC4-201ENST00000303406 AP5M1Q9H0R1 490 aa20.61■□□□□ 0.89
HOXC4-201ENST00000303406 NMRK2Q9NPI5 230 aa20.61■□□□□ 0.89
HOXC4-201ENST00000303406 WDR35Q9P2L0 1181 aa20.61■□□□□ 0.89
HOXC4-201ENST00000303406 GJD2Q9UKL4 321 aa20.61■□□□□ 0.89
HOXC4-201ENST00000303406 KIAA1257Q9ULG3 409 aa20.61■□□□□ 0.89
HOXC4-201ENST00000303406 DAPK3O43293 454 aa20.6■□□□□ 0.89
HOXC4-201ENST00000303406 RARAP10276 462 aa20.6■□□□□ 0.89
HOXC4-201ENST00000303406 HOXA11P31270 313 aaPredicted RBP20.6■□□□□ 0.89
HOXC4-201ENST00000303406 COILP38432 576 aaPredicted RBP20.6■□□□□ 0.89
HOXC4-201ENST00000303406 PRAMEF19Q5SWL8 479 aa20.6■□□□□ 0.89
HOXC4-201ENST00000303406 DNAJC24Q6P3W2 148 aa20.6■□□□□ 0.89
HOXC4-201ENST00000303406 NOTUMQ6P988 496 aa20.6■□□□□ 0.89
HOXC4-201ENST00000303406 CATSPER4Q7RTX7 472 aa20.6■□□□□ 0.89
HOXC4-201ENST00000303406 SAPCD2Q86UD0 394 aa20.6■□□□□ 0.89
HOXC4-201ENST00000303406 WDTC1Q8N5D0 677 aa20.6■□□□□ 0.89
HOXC4-201ENST00000303406 NIPA2Q8N8Q9 360 aa20.6■□□□□ 0.89
HOXC4-201ENST00000303406 EXD1Q8NHP7 514 aa20.6■□□□□ 0.89
HOXC4-201ENST00000303406 HPDLQ96IR7 371 aa20.6■□□□□ 0.89
HOXC4-201ENST00000303406 SDCBP2Q9H190 292 aa20.6■□□□□ 0.89
HOXC4-201ENST00000303406 PLEKHA4Q9H4M7 779 aa20.6■□□□□ 0.89
HOXC4-201ENST00000303406 HOMER3Q9NSC5 361 aa20.6■□□□□ 0.89
HOXC4-201ENST00000303406 DPP3Q9NY33 737 aa20.6■□□□□ 0.89
HOXC4-201ENST00000303406 PARP2Q9UGN5 583 aa20.6■□□□□ 0.89
HOXC4-201ENST00000303406 ADAM21Q9UKJ8 722 aa20.6■□□□□ 0.89
HOXC4-201ENST00000303406 CITO14578 2027 aa20.6■□□□□ 0.89
HOXC4-201ENST00000303406 VDRP11473 427 aa20.59■□□□□ 0.89
HOXC4-201ENST00000303406 GUCY2FP51841 1108 aa20.59■□□□□ 0.89
HOXC4-201ENST00000303406 PTPN11Q06124 597 aaPredicted RBP20.59■□□□□ 0.89
HOXC4-201ENST00000303406 KIZQ2M2Z5 673 aa20.59■□□□□ 0.89
HOXC4-201ENST00000303406 ZNF394Q53GI3 561 aa20.59■□□□□ 0.89
HOXC4-201ENST00000303406 CCDC137Q6PK04 289 aaKnown RBP20.59■□□□□ 0.89
HOXC4-201ENST00000303406 SYDE1Q6ZW31 735 aaPredicted RBP20.59■□□□□ 0.89
HOXC4-201ENST00000303406 NME8Q8N427 588 aa20.59■□□□□ 0.89
HOXC4-201ENST00000303406 SLC4A11Q8NBS3 891 aa20.59■□□□□ 0.89
HOXC4-201ENST00000303406 TMEM176AQ96HP8 235 aa20.59■□□□□ 0.89
HOXC4-201ENST00000303406 SNX27Q96L92 541 aa20.59■□□□□ 0.89
HOXC4-201ENST00000303406 PRDM10Q9NQV6 1147 aa20.59■□□□□ 0.89
HOXC4-201ENST00000303406 AGAP1Q9UPQ3 857 aa20.59■□□□□ 0.89
HOXC4-201ENST00000303406 KPNA6O60684 536 aa20.58■□□□□ 0.89
HOXC4-201ENST00000303406 NPTXRO95502 500 aa20.58■□□□□ 0.89
HOXC4-201ENST00000303406 HOXC8P31273 242 aa20.58■□□□□ 0.89
HOXC4-201ENST00000303406 SREBF2Q12772 1141 aa20.58■□□□□ 0.89
HOXC4-201ENST00000303406 PIGHQ14442 188 aaPredicted RBP20.58■□□□□ 0.89
HOXC4-201ENST00000303406 C2CD6Q53TS8 623 aa20.58■□□□□ 0.89
HOXC4-201ENST00000303406 LLGL2Q6P1M3 1020 aa20.58■□□□□ 0.89
HOXC4-201ENST00000303406 DENND1BQ6P3S1 775 aa20.58■□□□□ 0.89
HOXC4-201ENST00000303406 ADAT2Q7Z6V5 191 aaKnown RBP20.58■□□□□ 0.89
HOXC4-201ENST00000303406 FNIP1Q8TF40 1166 aa20.58■□□□□ 0.89
HOXC4-201ENST00000303406 C18orf8Q96DM3 657 aa20.58■□□□□ 0.89
HOXC4-201ENST00000303406 KIF12Q96FN5 646 aa20.58■□□□□ 0.89
HOXC4-201ENST00000303406 ZIM3Q96PE6 472 aa20.58■□□□□ 0.89
HOXC4-201ENST00000303406 TRIM51Q9BSJ1 452 aa20.58■□□□□ 0.89
HOXC4-201ENST00000303406 FAM49AQ9H0Q0 323 aaPredicted RBP20.58■□□□□ 0.89
HOXC4-201ENST00000303406 SMYD3Q9H7B4 428 aa20.58■□□□□ 0.89
HOXC4-201ENST00000303406 BARX2Q9UMQ3 279 aaPredicted RBP20.58■□□□□ 0.89
HOXC4-201ENST00000303406 HMGCRP04035 888 aa20.58■□□□□ 0.88
HOXC4-201ENST00000303406 GNAT1P11488 350 aa20.58■□□□□ 0.88
HOXC4-201ENST00000303406 CD19P15391 556 aa20.58■□□□□ 0.88
HOXC4-201ENST00000303406 CYP2C19P33261 490 aa20.58■□□□□ 0.88
HOXC4-201ENST00000303406 CETN2P41208 172 aa20.58■□□□□ 0.88
HOXC4-201ENST00000303406 YARSP54577 528 aaKnown RBP20.58■□□□□ 0.88
HOXC4-201ENST00000303406 STILQ15468 1287 aa20.58■□□□□ 0.88
HOXC4-201ENST00000303406 CNGA2Q16280 664 aa20.58■□□□□ 0.88
HOXC4-201ENST00000303406 TTC27Q6P3X3 843 aa20.58■□□□□ 0.88
HOXC4-201ENST00000303406 DDX42Q86XP3 938 aaKnown RBP eCLIP20.58■□□□□ 0.88
HOXC4-201ENST00000303406 ELOVL4Q9GZR5 314 aa20.58■□□□□ 0.88
HOXC4-201ENST00000303406 NEUROG2Q9H2A3 272 aa20.58■□□□□ 0.88
HOXC4-201ENST00000303406 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.58■□□□□ 0.88
HOXC4-201ENST00000303406 FEZ2Q9UHY8 353 aaPredicted RBP20.58■□□□□ 0.88
HOXC4-201ENST00000303406 CYP2B6P20813 491 aa20.57■□□□□ 0.88
HOXC4-201ENST00000303406 SSTR3P32745 418 aaPredicted RBP20.57■□□□□ 0.88
HOXC4-201ENST00000303406 RAP1GAPP47736 663 aa20.57■□□□□ 0.88
HOXC4-201ENST00000303406 MYO1EQ12965 1108 aa20.57■□□□□ 0.88
HOXC4-201ENST00000303406 ZBTB6Q15916 424 aa20.57■□□□□ 0.88
HOXC4-201ENST00000303406 CCL14Q16627 93 aa20.57■□□□□ 0.88
HOXC4-201ENST00000303406 PHLDB2Q86SQ0 1253 aa20.57■□□□□ 0.88
HOXC4-201ENST00000303406 LRRC52Q8N7C0 313 aa20.57■□□□□ 0.88
HOXC4-201ENST00000303406 PIK3R5Q8WYR1 880 aa20.57■□□□□ 0.88
HOXC4-201ENST00000303406 RBM41Q96IZ5 413 aaKnown RBP20.57■□□□□ 0.88
HOXC4-201ENST00000303406 ZDHHC18Q9NUE0 388 aa20.57■□□□□ 0.88
HOXC4-201ENST00000303406 CNTN3Q9P232 1028 aa20.57■□□□□ 0.88
HOXC4-201ENST00000303406 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.57■□□□□ 0.88
HOXC4-201ENST00000303406 DOCK3Q8IZD9 2030 aa20.57■□□□□ 0.88
HOXC4-201ENST00000303406 PASKQ96RG2 1323 aa20.56■□□□□ 0.88
HOXC4-201ENST00000303406 TCRBV7S2A1N4TA0A589 114 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms