RNA–Protein interactions for RNA: ENST00000302538.9

ABR-202, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABR, Length 5,289 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-202ENST00000302538 GPRC5DQ9NZD1 345 aa13.68□□□□□ -0.22
ABR-202ENST00000302538 SLIT3O75094 1523 aa13.68□□□□□ -0.22
ABR-202ENST00000302538 BRD2P25440 801 aaKnown RBP13.68□□□□□ -0.22
ABR-202ENST00000302538 EIF2B5Q13144 721 aaKnown RBP13.68□□□□□ -0.22
ABR-202ENST00000302538 PPIL2Q13356 520 aa13.68□□□□□ -0.22
ABR-202ENST00000302538 PIGHQ14442 188 aaPredicted RBP13.68□□□□□ -0.22
ABR-202ENST00000302538 MORF4L2Q15014 288 aa13.68□□□□□ -0.22
ABR-202ENST00000302538 CES5AQ6NT32 575 aa13.68□□□□□ -0.22
ABR-202ENST00000302538 IPMKQ8NFU5 416 aa13.68□□□□□ -0.22
ABR-202ENST00000302538 NEUROG2Q9H2A3 272 aa13.68□□□□□ -0.22
ABR-202ENST00000302538 WDCPQ9H6R7 721 aa13.68□□□□□ -0.22
ABR-202ENST00000302538 CNOT10Q9H9A5 744 aaKnown RBP13.68□□□□□ -0.22
ABR-202ENST00000302538 SALL1Q9NSC2 1324 aa13.67□□□□□ -0.22
ABR-202ENST00000302538 EPHB2P29323 1055 aa13.67□□□□□ -0.22
ABR-202ENST00000302538 PPM1LQ5SGD2 360 aa13.67□□□□□ -0.22
ABR-202ENST00000302538 TAF2Q6P1X5 1199 aa13.67□□□□□ -0.22
ABR-202ENST00000302538 SYTL5Q8TDW5 730 aaPredicted RBP13.67□□□□□ -0.22
ABR-202ENST00000302538 GPRC5CQ9NQ84 441 aa13.67□□□□□ -0.22
ABR-202ENST00000302538 ARHGEF38Q9NXL2 777 aa13.67□□□□□ -0.22
ABR-202ENST00000302538 APOBEC2Q9Y235 224 aaKnown RBP13.67□□□□□ -0.22
ABR-202ENST00000302538 VWA5AO00534 786 aa13.67□□□□□ -0.22
ABR-202ENST00000302538 ZNF263O14978 683 aa13.67□□□□□ -0.22
ABR-202ENST00000302538 CTIFO43310 598 aaKnown RBP13.67□□□□□ -0.22
ABR-202ENST00000302538 EFEMP1Q12805 493 aa13.67□□□□□ -0.22
ABR-202ENST00000302538 PLD1Q13393 1074 aa13.67□□□□□ -0.22
ABR-202ENST00000302538 PDK1Q15118 436 aa13.67□□□□□ -0.22
ABR-202ENST00000302538 PTPAQ15257 358 aa13.67□□□□□ -0.22
ABR-202ENST00000302538 PCNX4Q63HM2 1172 aa13.67□□□□□ -0.22
ABR-202ENST00000302538 DHX40Q8IX18 779 aaKnown RBP13.67□□□□□ -0.22
ABR-202ENST00000302538 KCTD17Q8N5Z5 321 aa13.67□□□□□ -0.22
ABR-202ENST00000302538 ZC3H15Q8WU90 426 aaKnown RBP13.67□□□□□ -0.22
ABR-202ENST00000302538 TRAIPQ9BWF2 469 aa13.67□□□□□ -0.22
ABR-202ENST00000302538 SLC13A1Q9BZW2 595 aa13.67□□□□□ -0.22
ABR-202ENST00000302538 CPSF2Q9P2I0 782 aaKnown RBP13.67□□□□□ -0.22
ABR-202ENST00000302538 TMEM88BA6NKF7 163 aa13.67□□□□□ -0.22
ABR-202ENST00000302538 PYGLP06737 847 aa13.67□□□□□ -0.22
ABR-202ENST00000302538 PSEN2P49810 448 aa13.67□□□□□ -0.22
ABR-202ENST00000302538 BEX3Q00994 111 aa13.67□□□□□ -0.22
ABR-202ENST00000302538 SPARCL1Q14515 664 aa13.67□□□□□ -0.22
ABR-202ENST00000302538 IZUMO3Q5VZ72 239 aa13.67□□□□□ -0.22
ABR-202ENST00000302538 PTPRN2Q92932 1015 aa13.67□□□□□ -0.22
ABR-202ENST00000302538 NR1H4Q96RI1 486 aaPredicted RBP13.67□□□□□ -0.22
ABR-202ENST00000302538 PDCD2LQ9BRP1 358 aa13.67□□□□□ -0.22
ABR-202ENST00000302538 SENP2Q9HC62 589 aa13.67□□□□□ -0.22
ABR-202ENST00000302538 A0A1B0GUA9 196 aa13.67□□□□□ -0.22
ABR-202ENST00000302538 TTC26A0AVF1 554 aa13.67□□□□□ -0.22
ABR-202ENST00000302538 M0QYT0 321 aa13.67□□□□□ -0.22
ABR-202ENST00000302538 KITP10721 976 aa13.67□□□□□ -0.22
ABR-202ENST00000302538 TRIM68Q6AZZ1 485 aa13.67□□□□□ -0.22
ABR-202ENST00000302538 SNX31Q8N9S9 440 aa13.67□□□□□ -0.22
ABR-202ENST00000302538 RIN2Q8WYP3 895 aaPredicted RBP13.67□□□□□ -0.22
ABR-202ENST00000302538 BCL2L12Q9HB09 334 aa13.67□□□□□ -0.22
ABR-202ENST00000302538 SUFUQ9UMX1 484 aa13.67□□□□□ -0.22
ABR-202ENST00000302538 PCDHB2Q9Y5E7 798 aa13.67□□□□□ -0.22
ABR-202ENST00000302538 A0A0G2JND7 137 aa13.66□□□□□ -0.22
ABR-202ENST00000302538 SLC12A8A0AV02 714 aa13.66□□□□□ -0.22
ABR-202ENST00000302538 NCK2O43639 380 aa13.66□□□□□ -0.22
ABR-202ENST00000302538 CABYRO75952 493 aa13.66□□□□□ -0.22
ABR-202ENST00000302538 APRTP07741 180 aa13.66□□□□□ -0.22
ABR-202ENST00000302538 NNTQ13423 1086 aa13.66□□□□□ -0.22
ABR-202ENST00000302538 ACOT1Q86TX2 421 aa13.66□□□□□ -0.22
ABR-202ENST00000302538 PPP1R2P1Q96PQ5 205 aa13.66□□□□□ -0.22
ABR-202ENST00000302538 RASSF4Q9H2L5 321 aa13.66□□□□□ -0.22
ABR-202ENST00000302538 MAPK13O15264 365 aa13.66□□□□□ -0.22
ABR-202ENST00000302538 CSDE1O75534 798 aaKnown RBP13.66□□□□□ -0.22
ABR-202ENST00000302538 ENDOD1O94919 500 aa13.66□□□□□ -0.22
ABR-202ENST00000302538 ESRRAP11474 423 aaPredicted RBP13.66□□□□□ -0.22
ABR-202ENST00000302538 RGS4P49798 205 aa13.66□□□□□ -0.22
ABR-202ENST00000302538 ANTXR2P58335 489 aa13.66□□□□□ -0.22
ABR-202ENST00000302538 NFE2Q16621 373 aaPredicted RBP13.66□□□□□ -0.22
ABR-202ENST00000302538 SPDYAQ5MJ70 313 aa13.66□□□□□ -0.22
ABR-202ENST00000302538 FAM171A1Q5VUB5 890 aa13.66□□□□□ -0.22
ABR-202ENST00000302538 CCDC137Q6PK04 289 aaKnown RBP13.66□□□□□ -0.22
ABR-202ENST00000302538 TRIM55Q9BYV6 548 aa13.66□□□□□ -0.22
ABR-202ENST00000302538 TMEM117Q9H0C3 514 aa13.66□□□□□ -0.22
ABR-202ENST00000302538 ATXN3LQ9H3M9 355 aa13.66□□□□□ -0.22
ABR-202ENST00000302538 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.66□□□□□ -0.22
ABR-202ENST00000302538 CAPN7Q9Y6W3 813 aa13.66□□□□□ -0.22
ABR-202ENST00000302538 A0A087WUV0 522 aaPredicted RBP13.66□□□□□ -0.22
ABR-202ENST00000302538 NPM3O75607 178 aaKnown RBP13.66□□□□□ -0.22
ABR-202ENST00000302538 EPB42P16452 691 aa13.66□□□□□ -0.22
ABR-202ENST00000302538 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.66□□□□□ -0.22
ABR-202ENST00000302538 OTUB1Q96FW1 271 aaPredicted RBP13.66□□□□□ -0.22
ABR-202ENST00000302538 SNF8Q96H20 258 aa13.66□□□□□ -0.22
ABR-202ENST00000302538 NFKBIZQ9BYH8 718 aa13.66□□□□□ -0.22
ABR-202ENST00000302538 METTL5Q9NRN9 209 aaKnown RBP13.66□□□□□ -0.22
ABR-202ENST00000302538 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.66□□□□□ -0.22
ABR-202ENST00000302538 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.66□□□□□ -0.22
ABR-202ENST00000302538 PPARGC1AQ9UBK2 798 aaKnown RBP13.66□□□□□ -0.22
ABR-202ENST00000302538 VPS28Q9UK41 221 aa13.66□□□□□ -0.22
ABR-202ENST00000302538 PACSIN2Q9UNF0 486 aaPredicted RBP13.66□□□□□ -0.22
ABR-202ENST00000302538 ADAMTSL3P82987 1691 aa13.66□□□□□ -0.22
ABR-202ENST00000302538 TGFB3P10600 412 aa13.66□□□□□ -0.22
ABR-202ENST00000302538 STMN1P16949 149 aa13.66□□□□□ -0.22
ABR-202ENST00000302538 FXR2P51116 673 aaKnown RBP eCLIP13.66□□□□□ -0.22
ABR-202ENST00000302538 PHKG1Q16816 387 aa13.66□□□□□ -0.22
ABR-202ENST00000302538 FSCBQ5H9T9 825 aa13.66□□□□□ -0.22
ABR-202ENST00000302538 HERC6Q8IVU3 1022 aa13.66□□□□□ -0.22
ABR-202ENST00000302538 TUBB6Q9BUF5 446 aa13.66□□□□□ -0.22
ABR-202ENST00000302538 ASPSCR1Q9BZE9 553 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms