RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 ABRAQ8N0Z2 381 aa16.76■□□□□ 0.27
SMAD6-201ENST00000288840 LMO3Q8TAP4 145 aa16.76■□□□□ 0.27
SMAD6-201ENST00000288840 CCDC110Q8TBZ0 833 aa16.76■□□□□ 0.27
SMAD6-201ENST00000288840 PGM2Q96G03 612 aa16.76■□□□□ 0.27
SMAD6-201ENST00000288840 SPATA33Q96N06 139 aa16.76■□□□□ 0.27
SMAD6-201ENST00000288840 TMEM237Q96Q45 408 aa16.76■□□□□ 0.27
SMAD6-201ENST00000288840 KIAA1683Q9H0B3 1180 aa16.76■□□□□ 0.27
SMAD6-201ENST00000288840 KCNG1Q9UIX4 513 aa16.76■□□□□ 0.27
SMAD6-201ENST00000288840 SMCHD1A6NHR9 2005 aa16.76■□□□□ 0.27
SMAD6-201ENST00000288840 TCF4P15884 667 aa16.76■□□□□ 0.27
SMAD6-201ENST00000288840 MUTP22033 750 aa16.76■□□□□ 0.27
SMAD6-201ENST00000288840 HSD17B4P51659 736 aa16.76■□□□□ 0.27
SMAD6-201ENST00000288840 EIF3EP60228 445 aaKnown RBP16.76■□□□□ 0.27
SMAD6-201ENST00000288840 PKN2Q16513 984 aaKnown RBP16.76■□□□□ 0.27
SMAD6-201ENST00000288840 ZNF772Q68DY9 489 aaPredicted RBP16.76■□□□□ 0.27
SMAD6-201ENST00000288840 ACTL9Q8TC94 416 aa16.76■□□□□ 0.27
SMAD6-201ENST00000288840 TMC2Q8TDI7 906 aa16.76■□□□□ 0.27
SMAD6-201ENST00000288840 METTL5Q9NRN9 209 aaKnown RBP16.76■□□□□ 0.27
SMAD6-201ENST00000288840 FAM49BQ9NUQ9 324 aa16.76■□□□□ 0.27
SMAD6-201ENST00000288840 POLIQ9UNA4 740 aa16.76■□□□□ 0.27
SMAD6-201ENST00000288840 PRPSAP2O60256 369 aa16.76■□□□□ 0.27
SMAD6-201ENST00000288840 CST3P01034 146 aaPredicted RBP16.76■□□□□ 0.27
SMAD6-201ENST00000288840 CYP1A2P05177 515 aa16.76■□□□□ 0.27
SMAD6-201ENST00000288840 MYBL1P10243 752 aa16.76■□□□□ 0.27
SMAD6-201ENST00000288840 MAPTP10636 758 aaKnown RBP16.76■□□□□ 0.27
SMAD6-201ENST00000288840 PEX5P50542 639 aa16.76■□□□□ 0.27
SMAD6-201ENST00000288840 MYBPC2Q14324 1141 aa16.76■□□□□ 0.27
SMAD6-201ENST00000288840 LVRNQ6Q4G3 990 aa16.76■□□□□ 0.27
SMAD6-201ENST00000288840 UBN1Q9NPG3 1134 aa16.76■□□□□ 0.27
SMAD6-201ENST00000288840 HAO1Q9UJM8 370 aa16.76■□□□□ 0.27
SMAD6-201ENST00000288840 SUPT20HL2P0C7V6 817 aa16.75■□□□□ 0.27
SMAD6-201ENST00000288840 RBP3P10745 1247 aa16.75■□□□□ 0.27
SMAD6-201ENST00000288840 ARL4CP56559 192 aa16.75■□□□□ 0.27
SMAD6-201ENST00000288840 OTUD4Q01804 1114 aaKnown RBP16.75■□□□□ 0.27
SMAD6-201ENST00000288840 FASTKD3Q14CZ7 662 aaKnown RBP16.75■□□□□ 0.27
SMAD6-201ENST00000288840 AMHR2Q16671 573 aa16.75■□□□□ 0.27
SMAD6-201ENST00000288840 SUPT20HL1Q3ZLR7 823 aa16.75■□□□□ 0.27
SMAD6-201ENST00000288840 PRM3Q9NNZ6 103 aa16.75■□□□□ 0.27
SMAD6-201ENST00000288840 NEBLO76041 1014 aa16.75■□□□□ 0.27
SMAD6-201ENST00000288840 FSBPO95073 299 aa16.75■□□□□ 0.27
SMAD6-201ENST00000288840 STAT4Q14765 748 aa16.75■□□□□ 0.27
SMAD6-201ENST00000288840 ZC3H3Q8IXZ2 948 aaKnown RBP16.75■□□□□ 0.27
SMAD6-201ENST00000288840 AGBL3Q8NEM8 1001 aa16.75■□□□□ 0.27
SMAD6-201ENST00000288840 STMN2Q93045 179 aa16.75■□□□□ 0.27
SMAD6-201ENST00000288840 SERPINB12Q96P63 405 aa16.75■□□□□ 0.27
SMAD6-201ENST00000288840 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.75■□□□□ 0.27
SMAD6-201ENST00000288840 CTCFP49711 727 aaPredicted RBP16.75■□□□□ 0.27
SMAD6-201ENST00000288840 MAMLD1Q13495 774 aa16.75■□□□□ 0.27
SMAD6-201ENST00000288840 CCDC62Q6P9F0 684 aa16.75■□□□□ 0.27
SMAD6-201ENST00000288840 FAM83AQ86UY5 434 aa16.75■□□□□ 0.27
SMAD6-201ENST00000288840 CYP4X1Q8N118 509 aa16.75■□□□□ 0.27
SMAD6-201ENST00000288840 NME8Q8N427 588 aa16.75■□□□□ 0.27
SMAD6-201ENST00000288840 CCNYQ8ND76 341 aa16.75■□□□□ 0.27
SMAD6-201ENST00000288840 SPATA18Q8TC71 538 aa16.75■□□□□ 0.27
SMAD6-201ENST00000288840 GPRASP2Q96D09 838 aa16.75■□□□□ 0.27
SMAD6-201ENST00000288840 TIPINQ9BVW5 301 aa16.75■□□□□ 0.27
SMAD6-201ENST00000288840 WHRNQ9P202 907 aa16.75■□□□□ 0.27
SMAD6-201ENST00000288840 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.75■□□□□ 0.27
SMAD6-201ENST00000288840 ZNF536O15090 1300 aa16.75■□□□□ 0.27
SMAD6-201ENST00000288840 KAT6AQ92794 2004 aa16.75■□□□□ 0.27
SMAD6-201ENST00000288840 NAV1Q8NEY1 1877 aa16.74■□□□□ 0.27
SMAD6-201ENST00000288840 APRTP07741 180 aa16.74■□□□□ 0.27
SMAD6-201ENST00000288840 GARTP22102 1010 aa16.74■□□□□ 0.27
SMAD6-201ENST00000288840 CPA2P48052 419 aa16.74■□□□□ 0.27
SMAD6-201ENST00000288840 NRLP54845 237 aa16.74■□□□□ 0.27
SMAD6-201ENST00000288840 CEP128Q6ZU80 1094 aa16.74■□□□□ 0.27
SMAD6-201ENST00000288840 RCOR2Q8IZ40 523 aa16.74■□□□□ 0.27
SMAD6-201ENST00000288840 ELP3Q9H9T3 547 aa16.74■□□□□ 0.27
SMAD6-201ENST00000288840 G3BP2Q9UN86 482 aaKnown RBP16.74■□□□□ 0.27
SMAD6-201ENST00000288840 MAPK13O15264 365 aa16.74■□□□□ 0.27
SMAD6-201ENST00000288840 BAG2O95816 211 aa16.74■□□□□ 0.27
SMAD6-201ENST00000288840 GLRA2P23416 452 aa16.74■□□□□ 0.27
SMAD6-201ENST00000288840 CAV1Q03135 178 aa16.74■□□□□ 0.27
SMAD6-201ENST00000288840 TMEM132BQ14DG7 1078 aa16.74■□□□□ 0.27
SMAD6-201ENST00000288840 C1orf220Q5T0J3 134 aa16.74■□□□□ 0.27
SMAD6-201ENST00000288840 KCNV1Q6PIU1 500 aa16.74■□□□□ 0.27
SMAD6-201ENST00000288840 ZNF516Q92618 1163 aa16.74■□□□□ 0.27
SMAD6-201ENST00000288840 ART4Q93070 314 aa16.74■□□□□ 0.27
SMAD6-201ENST00000288840 STAMBPL1Q96FJ0 436 aa16.74■□□□□ 0.27
SMAD6-201ENST00000288840 ROPN1BQ9BZX4 212 aaPredicted RBP16.74■□□□□ 0.27
SMAD6-201ENST00000288840 ROPN1Q9HAT0 212 aaPredicted RBP16.74■□□□□ 0.27
SMAD6-201ENST00000288840 RAB6BQ9NRW1 208 aa16.74■□□□□ 0.27
SMAD6-201ENST00000288840 AGAP1Q9UPQ3 857 aa16.74■□□□□ 0.27
SMAD6-201ENST00000288840 ZBED1O96006 694 aa16.74■□□□□ 0.27
SMAD6-201ENST00000288840 PDHA1P08559 390 aa16.74■□□□□ 0.27
SMAD6-201ENST00000288840 IFRD2Q12894 506 aaPredicted RBP16.74■□□□□ 0.27
SMAD6-201ENST00000288840 PIH1D1Q9NWS0 290 aaKnown RBP16.74■□□□□ 0.27
SMAD6-201ENST00000288840 I3L4J1 428 aa16.73■□□□□ 0.27
SMAD6-201ENST00000288840 ITGB3P05106 788 aa16.73■□□□□ 0.27
SMAD6-201ENST00000288840 CXCL8P10145 99 aa16.73■□□□□ 0.27
SMAD6-201ENST00000288840 GCNT1Q02742 428 aa16.73■□□□□ 0.27
SMAD6-201ENST00000288840 TFDP1Q14186 410 aa16.73■□□□□ 0.27
SMAD6-201ENST00000288840 OR6B3Q8NGW1 331 aa16.73■□□□□ 0.27
SMAD6-201ENST00000288840 CNKSR2Q8WXI2 1034 aa16.73■□□□□ 0.27
SMAD6-201ENST00000288840 XPNPEP1Q9NQW7 623 aa16.73■□□□□ 0.27
SMAD6-201ENST00000288840 HESX1Q9UBX0 185 aa16.73■□□□□ 0.27
SMAD6-201ENST00000288840 XPO7Q9UIA9 1087 aaKnown RBP16.73■□□□□ 0.27
SMAD6-201ENST00000288840 NUDT17P0C025 328 aa16.73■□□□□ 0.27
SMAD6-201ENST00000288840 PDGFRAP16234 1089 aa16.73■□□□□ 0.27
SMAD6-201ENST00000288840 NCKAP1LP55160 1127 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms