RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 C3orf62Q6ZUJ4 267 aa9.08□□□□□ -0.96
SCUBE3-201ENST00000274938 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.08□□□□□ -0.96
SCUBE3-201ENST00000274938 TRAPPC9Q96Q05 1148 aa9.08□□□□□ -0.96
SCUBE3-201ENST00000274938 SPATA16Q9BXB7 569 aa9.08□□□□□ -0.96
SCUBE3-201ENST00000274938 SEC31BQ9NQW1 1179 aa9.08□□□□□ -0.96
SCUBE3-201ENST00000274938 TUBE1Q9UJT0 475 aa9.08□□□□□ -0.96
SCUBE3-201ENST00000274938 POTEFA5A3E0 1075 aa9.08□□□□□ -0.96
SCUBE3-201ENST00000274938 POTEIP0CG38 1075 aa9.08□□□□□ -0.96
SCUBE3-201ENST00000274938 RRM2P31350 389 aa9.08□□□□□ -0.96
SCUBE3-201ENST00000274938 COILP38432 576 aaPredicted RBP9.08□□□□□ -0.96
SCUBE3-201ENST00000274938 GRAPQ13588 217 aa9.08□□□□□ -0.96
SCUBE3-201ENST00000274938 CACHD1Q5VU97 1274 aa9.08□□□□□ -0.96
SCUBE3-201ENST00000274938 RSBN1Q5VWQ0 802 aaPredicted RBP9.08□□□□□ -0.96
SCUBE3-201ENST00000274938 NAPEPLDQ6IQ20 393 aa9.08□□□□□ -0.96
SCUBE3-201ENST00000274938 POTEGQ6S5H5 508 aa9.08□□□□□ -0.96
SCUBE3-201ENST00000274938 POTEEQ6S8J3 1075 aa9.08□□□□□ -0.96
SCUBE3-201ENST00000274938 CCDC149Q6ZUS6 474 aa9.08□□□□□ -0.96
SCUBE3-201ENST00000274938 SIRT2Q8IXJ6 389 aa9.08□□□□□ -0.96
SCUBE3-201ENST00000274938 KRT78Q8N1N4 520 aa9.08□□□□□ -0.96
SCUBE3-201ENST00000274938 GRAPLQ8TC17 118 aaPredicted RBP9.08□□□□□ -0.96
SCUBE3-201ENST00000274938 LMTK3Q96Q04 1460 aa9.08□□□□□ -0.96
SCUBE3-201ENST00000274938 STX7O15400 261 aaKnown RBP9.08□□□□□ -0.96
SCUBE3-201ENST00000274938 RGS5O15539 181 aa9.08□□□□□ -0.96
SCUBE3-201ENST00000274938 CYP2E1P05181 493 aaPredicted RBP9.08□□□□□ -0.96
SCUBE3-201ENST00000274938 PDGFRAP16234 1089 aa9.08□□□□□ -0.96
SCUBE3-201ENST00000274938 BAG6P46379 1132 aa9.08□□□□□ -0.96
SCUBE3-201ENST00000274938 ERFP50548 548 aa9.08□□□□□ -0.96
SCUBE3-201ENST00000274938 NCALDP61601 193 aa9.08□□□□□ -0.96
SCUBE3-201ENST00000274938 OASLQ15646 514 aaKnown RBP9.08□□□□□ -0.96
SCUBE3-201ENST00000274938 CYB5R4Q7L1T6 521 aa9.08□□□□□ -0.96
SCUBE3-201ENST00000274938 SNX31Q8N9S9 440 aa9.08□□□□□ -0.96
SCUBE3-201ENST00000274938 C19orf18Q8NEA5 215 aa9.08□□□□□ -0.96
SCUBE3-201ENST00000274938 EIF2AK1Q9BQI3 630 aaKnown RBP9.08□□□□□ -0.96
SCUBE3-201ENST00000274938 KLHL3Q9UH77 587 aa9.08□□□□□ -0.96
SCUBE3-201ENST00000274938 UCHL3P15374 230 aa9.08□□□□□ -0.96
SCUBE3-201ENST00000274938 FDFT1P37268 417 aa9.08□□□□□ -0.96
SCUBE3-201ENST00000274938 MLH1P40692 756 aa9.08□□□□□ -0.96
SCUBE3-201ENST00000274938 PEX5P50542 639 aa9.08□□□□□ -0.96
SCUBE3-201ENST00000274938 CDC42EP1Q00587 391 aa9.08□□□□□ -0.96
SCUBE3-201ENST00000274938 DPYDQ12882 1025 aa9.08□□□□□ -0.96
SCUBE3-201ENST00000274938 COG2Q14746 738 aa9.08□□□□□ -0.96
SCUBE3-201ENST00000274938 TRMT5Q32P41 509 aaKnown RBP9.08□□□□□ -0.96
SCUBE3-201ENST00000274938 EEPD1Q7L9B9 569 aa9.08□□□□□ -0.96
SCUBE3-201ENST00000274938 LINC00523Q86TU6 105 aa9.08□□□□□ -0.96
SCUBE3-201ENST00000274938 ARID3BQ8IVW6 561 aaPredicted RBP9.08□□□□□ -0.96
SCUBE3-201ENST00000274938 TRIM9Q9C026 710 aa9.08□□□□□ -0.96
SCUBE3-201ENST00000274938 PABPC3Q9H361 631 aaKnown RBP9.08□□□□□ -0.96
SCUBE3-201ENST00000274938 CFAP99D6REC4 459 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 FAM83EQ2M2I3 478 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 RTL3Q8N8U3 475 aaKnown RBP9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 SIK2Q9H0K1 926 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 CENPXA8MT69 81 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 EEF2KO00418 725 aaKnown RBP9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 TRIM13O60858 407 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 APBA3O96018 575 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 IFNA14P01570 189 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 MYL3P08590 195 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 FAM58BPP0C7Q3 252 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 FCER1AP12319 257 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 ZNF23P17027 643 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 PTPN4P29074 926 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 HSD17B3P37058 310 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 ACADSBP45954 432 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 FMO5P49326 533 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 PLEKHA7Q6IQ23 1121 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 SVOPQ8N4V2 548 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 TC2NQ8N9U0 490 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 MKNK1Q9BUB5 465 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 GOLPH3Q9H4A6 298 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 TARSP26639 723 aaKnown RBP9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 SERPINH1P50454 418 aaKnown RBP9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 RAD23AP54725 363 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 NFX1Q12986 1120 aaKnown RBP9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 ZNF544Q6NX49 715 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 LRRC8DQ7L1W4 858 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 NMRK1Q9NWW6 199 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 GABBR1Q9UBS5 961 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 MKL2Q9ULH7 1088 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 ABCA5Q8WWZ7 1642 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 UTYO14607 1347 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 LOC100653049A0A140TA62 436 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 KRT34O76011 436 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 NCKAP1LP55160 1127 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 NPEPPSP55786 919 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 PSMC6P62333 389 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 VEPH1Q14D04 833 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 ERFEQ4G0M1 354 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 IKBIPQ70UQ0 350 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 VPS33AQ96AX1 596 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 HPS5Q9UPZ3 1129 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 F8W810 466 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 MLNP12872 115 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 MCAMP43121 646 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 BFSP2Q13515 415 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 HIST2H2ACQ16777 129 aaPredicted RBP9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 HIST2H2AA3Q6FI13 130 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 UGT3A1Q6NUS8 523 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 TAF2Q6P1X5 1199 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 TRIM65Q6PJ69 517 aa9.07□□□□□ -0.96
SCUBE3-201ENST00000274938 FAM45AQ8TCE6 357 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms