RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 CCSAPQ6IQ19 270 aaPredicted RBP16.8■□□□□ 0.28
VPS26A-201ENST00000263559 AADACL2Q6P093 401 aa16.8■□□□□ 0.28
VPS26A-201ENST00000263559 DENND1BQ6P3S1 775 aa16.8■□□□□ 0.28
VPS26A-201ENST00000263559 SMG8Q8ND04 991 aaKnown RBP16.8■□□□□ 0.28
VPS26A-201ENST00000263559 BEST2Q8NFU1 509 aa16.8■□□□□ 0.28
VPS26A-201ENST00000263559 TMEM176AQ96HP8 235 aa16.8■□□□□ 0.28
VPS26A-201ENST00000263559 IPPQ9Y573 584 aa16.8■□□□□ 0.28
VPS26A-201ENST00000263559 TRPV2Q9Y5S1 764 aa16.8■□□□□ 0.28
VPS26A-201ENST00000263559 SPDYE4A6NLX3 237 aa16.79■□□□□ 0.28
VPS26A-201ENST00000263559 MYO1FO00160 1098 aa16.79■□□□□ 0.28
VPS26A-201ENST00000263559 SASH3O75995 380 aa16.79■□□□□ 0.28
VPS26A-201ENST00000263559 ITGA4P13612 1032 aa16.79■□□□□ 0.28
VPS26A-201ENST00000263559 CTNNA1P35221 906 aaKnown RBP16.79■□□□□ 0.28
VPS26A-201ENST00000263559 PTPN11Q06124 597 aaPredicted RBP16.79■□□□□ 0.28
VPS26A-201ENST00000263559 CCNI2Q6ZMN8 369 aaPredicted RBP16.79■□□□□ 0.28
VPS26A-201ENST00000263559 SERINC5Q86VE9 423 aa16.79■□□□□ 0.28
VPS26A-201ENST00000263559 UBE2Q2Q8WVN8 375 aa16.79■□□□□ 0.28
VPS26A-201ENST00000263559 CFHR5Q9BXR6 569 aa16.79■□□□□ 0.28
VPS26A-201ENST00000263559 FUT8Q9BYC5 575 aa16.79■□□□□ 0.28
VPS26A-201ENST00000263559 MRPL47Q9HD33 250 aaKnown RBP16.79■□□□□ 0.28
VPS26A-201ENST00000263559 STIM2Q9P246 746 aa16.79■□□□□ 0.28
VPS26A-201ENST00000263559 PCDHA3Q9Y5H8 950 aa16.79■□□□□ 0.28
VPS26A-201ENST00000263559 GRIN2DO15399 1336 aa16.79■□□□□ 0.28
VPS26A-201ENST00000263559 SMIM28A0A1B0GU29 152 aa16.79■□□□□ 0.28
VPS26A-201ENST00000263559 MED7O43513 233 aa16.79■□□□□ 0.28
VPS26A-201ENST00000263559 GJB6O95452 261 aa16.79■□□□□ 0.28
VPS26A-201ENST00000263559 CTSHP09668 335 aa16.79■□□□□ 0.28
VPS26A-201ENST00000263559 MYBL2P10244 700 aa16.79■□□□□ 0.28
VPS26A-201ENST00000263559 CTNNA2P26232 953 aa16.79■□□□□ 0.28
VPS26A-201ENST00000263559 TWF2Q6IBS0 349 aaKnown RBP16.79■□□□□ 0.28
VPS26A-201ENST00000263559 RSPH3Q86UC2 560 aa16.79■□□□□ 0.28
VPS26A-201ENST00000263559 PLEKHA4Q9H4M7 779 aa16.79■□□□□ 0.28
VPS26A-201ENST00000263559 BARX2Q9UMQ3 279 aaPredicted RBP16.79■□□□□ 0.28
VPS26A-201ENST00000263559 L1RE1Q9UN81 338 aa16.79■□□□□ 0.28
VPS26A-201ENST00000263559 CCDC66A2RUB6 948 aa16.78■□□□□ 0.28
VPS26A-201ENST00000263559 CHRNA1P02708 482 aa16.78■□□□□ 0.28
VPS26A-201ENST00000263559 INCA1Q0VD86 236 aa16.78■□□□□ 0.28
VPS26A-201ENST00000263559 ARRDC4Q8NCT1 418 aa16.78■□□□□ 0.28
VPS26A-201ENST00000263559 PARVAQ9NVD7 372 aa16.78■□□□□ 0.28
VPS26A-201ENST00000263559 UBQLN1Q9UMX0 589 aaKnown RBP16.78■□□□□ 0.28
VPS26A-201ENST00000263559 NR2E1Q9Y466 385 aa16.78■□□□□ 0.28
VPS26A-201ENST00000263559 CEP83Q9Y592 693 aa16.78■□□□□ 0.28
VPS26A-201ENST00000263559 SCINQ9Y6U3 715 aa16.78■□□□□ 0.28
VPS26A-201ENST00000263559 ATP8B1O43520 1251 aa16.78■□□□□ 0.28
VPS26A-201ENST00000263559 CALB1P05937 261 aa16.78■□□□□ 0.28
VPS26A-201ENST00000263559 GLI1P08151 1106 aa16.78■□□□□ 0.28
VPS26A-201ENST00000263559 NDST1P52848 882 aa16.78■□□□□ 0.28
VPS26A-201ENST00000263559 XKR4Q5GH76 650 aa16.78■□□□□ 0.28
VPS26A-201ENST00000263559 C9orf57Q5W0N0 161 aa16.78■□□□□ 0.28
VPS26A-201ENST00000263559 ERICH1Q86X53 443 aa16.78■□□□□ 0.28
VPS26A-201ENST00000263559 LHX5Q9H2C1 402 aa16.78■□□□□ 0.28
VPS26A-201ENST00000263559 SNX9Q9Y5X1 595 aa16.78■□□□□ 0.28
VPS26A-201ENST00000263559 CCDC188H7C350 402 aa16.77■□□□□ 0.28
VPS26A-201ENST00000263559 TLR3O15455 904 aaKnown RBP16.77■□□□□ 0.28
VPS26A-201ENST00000263559 RPS6KA5O75582 802 aa16.77■□□□□ 0.28
VPS26A-201ENST00000263559 HMGCRP04035 888 aa16.77■□□□□ 0.28
VPS26A-201ENST00000263559 PYGMP11217 842 aa16.77■□□□□ 0.28
VPS26A-201ENST00000263559 CST5P28325 142 aaPredicted RBP16.77■□□□□ 0.28
VPS26A-201ENST00000263559 HOXD10P28358 340 aa16.77■□□□□ 0.28
VPS26A-201ENST00000263559 SESTD1Q86VW0 696 aa16.77■□□□□ 0.28
VPS26A-201ENST00000263559 GSPT2Q8IYD1 628 aaKnown RBP16.77■□□□□ 0.28
VPS26A-201ENST00000263559 HEXIM2Q96MH2 286 aaKnown RBP16.77■□□□□ 0.28
VPS26A-201ENST00000263559 SENP6Q9GZR1 1112 aaPredicted RBP16.77■□□□□ 0.28
VPS26A-201ENST00000263559 DDX47Q9H0S4 455 aaKnown RBP16.77■□□□□ 0.28
VPS26A-201ENST00000263559 FAM53CQ9NYF3 392 aa16.77■□□□□ 0.28
VPS26A-201ENST00000263559 CYTH4Q9UIA0 394 aa16.77■□□□□ 0.28
VPS26A-201ENST00000263559 ST3GAL5Q9UNP4 418 aa16.77■□□□□ 0.28
VPS26A-201ENST00000263559 THSD7BQ9C0I4 1608 aa16.77■□□□□ 0.28
VPS26A-201ENST00000263559 RAD51CO43502 376 aa16.77■□□□□ 0.27
VPS26A-201ENST00000263559 APLP1P51693 650 aa16.77■□□□□ 0.27
VPS26A-201ENST00000263559 RPL7AP62424 266 aaKnown RBP16.77■□□□□ 0.27
VPS26A-201ENST00000263559 NFX1Q12986 1120 aaKnown RBP16.77■□□□□ 0.27
VPS26A-201ENST00000263559 MAP3K21Q5TCX8 1036 aa16.77■□□□□ 0.27
VPS26A-201ENST00000263559 ADAT2Q7Z6V5 191 aaKnown RBP16.77■□□□□ 0.27
VPS26A-201ENST00000263559 LRRC52Q8N7C0 313 aa16.77■□□□□ 0.27
VPS26A-201ENST00000263559 FEZF2Q8TBJ5 459 aa16.77■□□□□ 0.27
VPS26A-201ENST00000263559 RUBCNQ92622 972 aa16.77■□□□□ 0.27
VPS26A-201ENST00000263559 HTTP42858 3142 aa16.77■□□□□ 0.27
VPS26A-201ENST00000263559 TCRBV5S1A1TA0A578 114 aa16.76■□□□□ 0.27
VPS26A-201ENST00000263559 SART1O43290 800 aaKnown RBP16.76■□□□□ 0.27
VPS26A-201ENST00000263559 PROSCO94903 275 aa16.76■□□□□ 0.27
VPS26A-201ENST00000263559 HEXIM1O94992 359 aaKnown RBP16.76■□□□□ 0.27
VPS26A-201ENST00000263559 VDRP11473 427 aa16.76■□□□□ 0.27
VPS26A-201ENST00000263559 KCNE1P15382 129 aa16.76■□□□□ 0.27
VPS26A-201ENST00000263559 SLC1A1P43005 524 aa16.76■□□□□ 0.27
VPS26A-201ENST00000263559 PTGISQ16647 500 aa16.76■□□□□ 0.27
VPS26A-201ENST00000263559 DAB2IPQ5VWQ8 1189 aa16.76■□□□□ 0.27
VPS26A-201ENST00000263559 FAM124BQ9H5Z6 455 aaPredicted RBP16.76■□□□□ 0.27
VPS26A-201ENST00000263559 OGFRQ9NZT2 677 aa16.76■□□□□ 0.27
VPS26A-201ENST00000263559 ZSCAN5CA6NGD5 496 aaPredicted RBP16.76■□□□□ 0.27
VPS26A-201ENST00000263559 RWDD2BP57060 319 aa16.76■□□□□ 0.27
VPS26A-201ENST00000263559 MGAT3Q09327 533 aa16.76■□□□□ 0.27
VPS26A-201ENST00000263559 PTPN20Q4JDL3 420 aa16.76■□□□□ 0.27
VPS26A-201ENST00000263559 CYP4A22Q5TCH4 519 aa16.76■□□□□ 0.27
VPS26A-201ENST00000263559 PCSK9Q8NBP7 692 aaKnown RBP16.76■□□□□ 0.27
VPS26A-201ENST00000263559 NAP1L3Q99457 506 aaPredicted RBP16.76■□□□□ 0.27
VPS26A-201ENST00000263559 MRPL45Q9BRJ2 306 aaKnown RBP16.76■□□□□ 0.27
VPS26A-201ENST00000263559 OSBPL7Q9BZF2 842 aa16.76■□□□□ 0.27
VPS26A-201ENST00000263559 DDX20Q9UHI6 824 aaKnown RBP16.76■□□□□ 0.27
VPS26A-201ENST00000263559 PIRO00625 290 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms