RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 CCDC77Q9BR77 488 aa17.3■□□□□ 0.36
TM9SF1-201ENST00000261789 PRKAG3Q9UGI9 489 aa17.3■□□□□ 0.36
TM9SF1-201ENST00000261789 STK38LQ9Y2H1 464 aa17.3■□□□□ 0.36
TM9SF1-201ENST00000261789 ARL2BPQ9Y2Y0 163 aa17.3■□□□□ 0.36
TM9SF1-201ENST00000261789 TMEM191CA6NGB0 347 aa17.29■□□□□ 0.36
TM9SF1-201ENST00000261789 OATP04181 439 aa17.29■□□□□ 0.36
TM9SF1-201ENST00000261789 TMEM191BP0C7N4 346 aa17.29■□□□□ 0.36
TM9SF1-201ENST00000261789 NQO1P15559 274 aaKnown RBP17.29■□□□□ 0.36
TM9SF1-201ENST00000261789 ALDH5A1P51649 535 aaPredicted RBP17.29■□□□□ 0.36
TM9SF1-201ENST00000261789 PLCB3Q01970 1234 aa17.29■□□□□ 0.36
TM9SF1-201ENST00000261789 C1QBPQ07021 282 aaKnown RBP17.29■□□□□ 0.36
TM9SF1-201ENST00000261789 PKN2Q16513 984 aaKnown RBP17.29■□□□□ 0.36
TM9SF1-201ENST00000261789 WDR72Q3MJ13 1102 aa17.29■□□□□ 0.36
TM9SF1-201ENST00000261789 SCARA5Q6ZMJ2 495 aa17.29■□□□□ 0.36
TM9SF1-201ENST00000261789 ANKLE1Q8NAG6 615 aa17.29■□□□□ 0.36
TM9SF1-201ENST00000261789 ZNF280CQ8ND82 737 aa17.29■□□□□ 0.36
TM9SF1-201ENST00000261789 MAGEB18Q96M61 343 aa17.29■□□□□ 0.36
TM9SF1-201ENST00000261789 MTMR12Q9C0I1 747 aa17.29■□□□□ 0.36
TM9SF1-201ENST00000261789 DHX33Q9H6R0 707 aaKnown RBP17.29■□□□□ 0.36
TM9SF1-201ENST00000261789 YY1AP1Q9H869 796 aa17.29■□□□□ 0.36
TM9SF1-201ENST00000261789 IP6K2Q9UHH9 426 aa17.29■□□□□ 0.36
TM9SF1-201ENST00000261789 PARP14Q460N5 1801 aa17.29■□□□□ 0.36
TM9SF1-201ENST00000261789 DNALI1O14645 258 aaPredicted RBP17.29■□□□□ 0.36
TM9SF1-201ENST00000261789 KRT16P08779 473 aa17.29■□□□□ 0.36
TM9SF1-201ENST00000261789 WEE2P0C1S8 567 aa17.29■□□□□ 0.36
TM9SF1-201ENST00000261789 PTPRAP18433 802 aa17.29■□□□□ 0.36
TM9SF1-201ENST00000261789 MYL6P60660 151 aa17.29■□□□□ 0.36
TM9SF1-201ENST00000261789 COPS2P61201 443 aa17.29■□□□□ 0.36
TM9SF1-201ENST00000261789 DYNLT1P63172 113 aa17.29■□□□□ 0.36
TM9SF1-201ENST00000261789 BNIP1Q12981 228 aa17.29■□□□□ 0.36
TM9SF1-201ENST00000261789 DNAJC3Q13217 504 aa17.29■□□□□ 0.36
TM9SF1-201ENST00000261789 SMTNL2Q2TAL5 461 aa17.29■□□□□ 0.36
TM9SF1-201ENST00000261789 DCUN1D2Q6PH85 259 aa17.29■□□□□ 0.36
TM9SF1-201ENST00000261789 ZBED8Q8IZ13 594 aa17.29■□□□□ 0.36
TM9SF1-201ENST00000261789 TMEM130Q8N3G9 435 aa17.29■□□□□ 0.36
TM9SF1-201ENST00000261789 BBOF1Q8ND07 529 aa17.29■□□□□ 0.36
TM9SF1-201ENST00000261789 SLC7A3Q8WY07 619 aa17.29■□□□□ 0.36
TM9SF1-201ENST00000261789 PITPNM3Q9BZ71 974 aa17.29■□□□□ 0.36
TM9SF1-201ENST00000261789 SLCO1B3Q9NPD5 702 aa17.29■□□□□ 0.36
TM9SF1-201ENST00000261789 GRID1Q9ULK0 1009 aa17.29■□□□□ 0.36
TM9SF1-201ENST00000261789 NFASCO94856 1347 aa17.29■□□□□ 0.36
TM9SF1-201ENST00000261789 LRRD1A4D1F6 860 aa17.28■□□□□ 0.36
TM9SF1-201ENST00000261789 H0YCG3 227 aa17.28■□□□□ 0.36
TM9SF1-201ENST00000261789 ARL2P36404 184 aa17.28■□□□□ 0.36
TM9SF1-201ENST00000261789 NAMPTP43490 491 aa17.28■□□□□ 0.36
TM9SF1-201ENST00000261789 GNPTABQ3T906 1256 aa17.28■□□□□ 0.36
TM9SF1-201ENST00000261789 ECHDC2Q86YB7 292 aa17.28■□□□□ 0.36
TM9SF1-201ENST00000261789 ANKMY2Q8IV38 441 aa17.28■□□□□ 0.36
TM9SF1-201ENST00000261789 KLHL29Q96CT2 875 aa17.28■□□□□ 0.36
TM9SF1-201ENST00000261789 ZNF668Q96K58 619 aaPredicted RBP17.28■□□□□ 0.36
TM9SF1-201ENST00000261789 TCHPQ9BT92 498 aa17.28■□□□□ 0.36
TM9SF1-201ENST00000261789 VPS37BQ9H9H4 285 aa17.28■□□□□ 0.36
TM9SF1-201ENST00000261789 TJP2Q9UDY2 1190 aa17.28■□□□□ 0.36
TM9SF1-201ENST00000261789 MCM8Q9UJA3 840 aa17.28■□□□□ 0.36
TM9SF1-201ENST00000261789 MAFBQ9Y5Q3 323 aaPredicted RBP17.28■□□□□ 0.36
TM9SF1-201ENST00000261789 RLFQ13129 1914 aa17.28■□□□□ 0.36
TM9SF1-201ENST00000261789 ADGRA2Q96PE1 1338 aa17.28■□□□□ 0.36
TM9SF1-201ENST00000261789 LOC102724159A0A0B4J2E5 919 aa17.28■□□□□ 0.36
TM9SF1-201ENST00000261789 FAM47DPA6NHR8 397 aa17.28■□□□□ 0.36
TM9SF1-201ENST00000261789 ITGBL1O95965 494 aaPredicted RBP17.28■□□□□ 0.36
TM9SF1-201ENST00000261789 ENPEPQ07075 957 aa17.28■□□□□ 0.36
TM9SF1-201ENST00000261789 CAPSQ13938 189 aa17.28■□□□□ 0.36
TM9SF1-201ENST00000261789 PWP2Q15269 919 aaKnown RBP17.28■□□□□ 0.36
TM9SF1-201ENST00000261789 KCNT1Q5JUK3 1230 aa17.28■□□□□ 0.36
TM9SF1-201ENST00000261789 SPOCD1Q6ZMY3 1216 aa17.28■□□□□ 0.36
TM9SF1-201ENST00000261789 TRABD2AQ86V40 505 aa17.28■□□□□ 0.36
TM9SF1-201ENST00000261789 MICALL2Q8IY33 904 aa17.28■□□□□ 0.36
TM9SF1-201ENST00000261789 RCOR2Q8IZ40 523 aa17.28■□□□□ 0.36
TM9SF1-201ENST00000261789 WDTC1Q8N5D0 677 aa17.28■□□□□ 0.36
TM9SF1-201ENST00000261789 ALLCQ8N6M5 410 aa17.28■□□□□ 0.36
TM9SF1-201ENST00000261789 JDP2Q8WYK2 163 aa17.28■□□□□ 0.36
TM9SF1-201ENST00000261789 STAMBPL1Q96FJ0 436 aa17.28■□□□□ 0.36
TM9SF1-201ENST00000261789 CNTN6Q9UQ52 1028 aa17.28■□□□□ 0.36
TM9SF1-201ENST00000261789 TJP3O95049 919 aa17.27■□□□□ 0.36
TM9SF1-201ENST00000261789 RPSAP08865 295 aaKnown RBP17.27■□□□□ 0.36
TM9SF1-201ENST00000261789 TBXAS1P24557 533 aaPredicted RBP17.27■□□□□ 0.36
TM9SF1-201ENST00000261789 TGFB2P61812 414 aa17.27■□□□□ 0.36
TM9SF1-201ENST00000261789 SLFN12LQ6IEE8 588 aa17.27■□□□□ 0.36
TM9SF1-201ENST00000261789 GPAT2Q6NUI2 795 aa17.27■□□□□ 0.36
TM9SF1-201ENST00000261789 DNAJC24Q6P3W2 148 aa17.27■□□□□ 0.36
TM9SF1-201ENST00000261789 RELL1Q8IUW5 271 aa17.27■□□□□ 0.36
TM9SF1-201ENST00000261789 TFAP2BQ92481 460 aa17.27■□□□□ 0.36
TM9SF1-201ENST00000261789 ACAD9Q9H845 621 aa17.27■□□□□ 0.36
TM9SF1-201ENST00000261789 A0A1W2PPM1 405 aa17.27■□□□□ 0.35
TM9SF1-201ENST00000261789 SGK1O00141 431 aa17.27■□□□□ 0.35
TM9SF1-201ENST00000261789 KRT15P19012 456 aa17.27■□□□□ 0.35
TM9SF1-201ENST00000261789 RPA3P35244 121 aaPredicted RBP17.27■□□□□ 0.35
TM9SF1-201ENST00000261789 ZNF132P52740 706 aa17.27■□□□□ 0.35
TM9SF1-201ENST00000261789 MTFR1Q15390 333 aa17.27■□□□□ 0.35
TM9SF1-201ENST00000261789 EAPPQ56P03 285 aaPredicted RBP17.27■□□□□ 0.35
TM9SF1-201ENST00000261789 SCYL3Q8IZE3 742 aa17.27■□□□□ 0.35
TM9SF1-201ENST00000261789 ANKRD35Q8N283 1001 aa17.27■□□□□ 0.35
TM9SF1-201ENST00000261789 AGAP11Q8TF27 550 aa17.27■□□□□ 0.35
TM9SF1-201ENST00000261789 RBM41Q96IZ5 413 aaKnown RBP17.27■□□□□ 0.35
TM9SF1-201ENST00000261789 CDHR1Q96JP9 859 aa17.27■□□□□ 0.35
TM9SF1-201ENST00000261789 CFAP57Q96MR6 1250 aa17.27■□□□□ 0.35
TM9SF1-201ENST00000261789 MYCBPQ99417 103 aaPredicted RBP17.27■□□□□ 0.35
TM9SF1-201ENST00000261789 TEX13BQ9BXU2 312 aa17.27■□□□□ 0.35
TM9SF1-201ENST00000261789 RXFP1Q9HBX9 757 aa17.27■□□□□ 0.35
TM9SF1-201ENST00000261789 PICK1Q9NRD5 415 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms