RNA–Protein interactions for RNA: ENST00000257414.12

SEMA6A-201, Transcript of semaphorin 6A, humanhuman

TSL 1 (best) BASIC

Gene SEMA6A, Length 4,256 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-201ENST00000257414 RANBP17Q9H2T7 1088 aaKnown RBP10.61□□□□□ -0.71
SEMA6A-201ENST00000257414 COX16Q9P0S2 106 aa10.61□□□□□ -0.71
SEMA6A-201ENST00000257414 CCDC88AQ3V6T2 1871 aa10.6□□□□□ -0.71
SEMA6A-201ENST00000257414 RPTORQ8N122 1335 aa10.6□□□□□ -0.71
SEMA6A-201ENST00000257414 CCDC22O60826 627 aa10.6□□□□□ -0.71
SEMA6A-201ENST00000257414 RBP3P10745 1247 aa10.6□□□□□ -0.71
SEMA6A-201ENST00000257414 PECAM1P16284 738 aaPredicted RBP10.6□□□□□ -0.71
SEMA6A-201ENST00000257414 POLE2P56282 527 aa10.6□□□□□ -0.71
SEMA6A-201ENST00000257414 PRUNE1Q86TP1 453 aa10.6□□□□□ -0.71
SEMA6A-201ENST00000257414 MAP4K3Q8IVH8 894 aa10.6□□□□□ -0.71
SEMA6A-201ENST00000257414 PDCD2LQ9BRP1 358 aa10.6□□□□□ -0.71
SEMA6A-201ENST00000257414 HNRNPCL1O60812 293 aaKnown RBP10.6□□□□□ -0.71
SEMA6A-201ENST00000257414 RASSF9O75901 435 aa10.6□□□□□ -0.71
SEMA6A-201ENST00000257414 PTK7Q13308 1070 aa10.6□□□□□ -0.71
SEMA6A-201ENST00000257414 PPIL6Q8IXY8 311 aa10.6□□□□□ -0.71
SEMA6A-201ENST00000257414 ABRAQ8N0Z2 381 aa10.6□□□□□ -0.71
SEMA6A-201ENST00000257414 PAF1Q8N7H5 531 aa10.6□□□□□ -0.71
SEMA6A-201ENST00000257414 ARMC2Q8NEN0 867 aa10.6□□□□□ -0.71
SEMA6A-201ENST00000257414 RDM1Q8NG50 284 aa10.6□□□□□ -0.71
SEMA6A-201ENST00000257414 IL31RAQ8NI17 732 aa10.6□□□□□ -0.71
SEMA6A-201ENST00000257414 SEMA4DQ92854 862 aa10.6□□□□□ -0.71
SEMA6A-201ENST00000257414 TMEM237Q96Q45 408 aa10.6□□□□□ -0.71
SEMA6A-201ENST00000257414 WRNIP1Q96S55 665 aa10.6□□□□□ -0.71
SEMA6A-201ENST00000257414 ACAD9Q9H845 621 aa10.6□□□□□ -0.71
SEMA6A-201ENST00000257414 CYP26B1Q9NR63 512 aa10.6□□□□□ -0.71
SEMA6A-201ENST00000257414 DMAC2Q9NW81 257 aa10.6□□□□□ -0.71
SEMA6A-201ENST00000257414 DOT1LQ8TEK3 1739 aa10.6□□□□□ -0.71
SEMA6A-201ENST00000257414 C5orf60A6NFR6 353 aa10.6□□□□□ -0.71
SEMA6A-201ENST00000257414 DNALI1O14645 258 aaPredicted RBP10.6□□□□□ -0.71
SEMA6A-201ENST00000257414 FDX1P10109 184 aa10.6□□□□□ -0.71
SEMA6A-201ENST00000257414 PGM1P36871 562 aa10.6□□□□□ -0.71
SEMA6A-201ENST00000257414 AP3M2P53677 418 aa10.6□□□□□ -0.71
SEMA6A-201ENST00000257414 BCAR1P56945 870 aa10.6□□□□□ -0.71
SEMA6A-201ENST00000257414 CACNA1SQ13698 1873 aa10.6□□□□□ -0.71
SEMA6A-201ENST00000257414 PKN2Q16513 984 aaKnown RBP10.6□□□□□ -0.71
SEMA6A-201ENST00000257414 SPOCD1Q6ZMY3 1216 aa10.6□□□□□ -0.71
SEMA6A-201ENST00000257414 CPNE8Q86YQ8 564 aa10.6□□□□□ -0.71
SEMA6A-201ENST00000257414 NUDCD3Q8IVD9 361 aa10.6□□□□□ -0.71
SEMA6A-201ENST00000257414 ZC3H3Q8IXZ2 948 aaKnown RBP10.6□□□□□ -0.71
SEMA6A-201ENST00000257414 NME8Q8N427 588 aa10.6□□□□□ -0.71
SEMA6A-201ENST00000257414 C7orf31Q8N865 590 aa10.6□□□□□ -0.71
SEMA6A-201ENST00000257414 DNPEPQ9ULA0 475 aa10.6□□□□□ -0.71
SEMA6A-201ENST00000257414 ANKRD36CQ5JPF3 1778 aa10.6□□□□□ -0.71
SEMA6A-201ENST00000257414 FOXO6A8MYZ6 492 aa10.59□□□□□ -0.71
SEMA6A-201ENST00000257414 ZSCAN5DPP0CG00 497 aa10.59□□□□□ -0.71
SEMA6A-201ENST00000257414 HMGCS2P54868 508 aa10.59□□□□□ -0.71
SEMA6A-201ENST00000257414 ACTR2P61160 394 aa10.59□□□□□ -0.71
SEMA6A-201ENST00000257414 MORF4L2Q15014 288 aa10.59□□□□□ -0.71
SEMA6A-201ENST00000257414 WDR72Q3MJ13 1102 aa10.59□□□□□ -0.71
SEMA6A-201ENST00000257414 TFDP3Q5H9I0 405 aa10.59□□□□□ -0.71
SEMA6A-201ENST00000257414 MDH1BQ5I0G3 518 aa10.59□□□□□ -0.71
SEMA6A-201ENST00000257414 KCNT1Q5JUK3 1230 aa10.59□□□□□ -0.71
SEMA6A-201ENST00000257414 LLGL2Q6P1M3 1020 aa10.59□□□□□ -0.71
SEMA6A-201ENST00000257414 MFSD7Q6UXD7 560 aa10.59□□□□□ -0.71
SEMA6A-201ENST00000257414 IFT122Q9HBG6 1241 aa10.59□□□□□ -0.71
SEMA6A-201ENST00000257414 RAB6BQ9NRW1 208 aa10.59□□□□□ -0.71
SEMA6A-201ENST00000257414 ATP8B3O60423 1300 aa10.59□□□□□ -0.71
SEMA6A-201ENST00000257414 PIK3R2O00459 728 aa10.59□□□□□ -0.71
SEMA6A-201ENST00000257414 NCALDP61601 193 aa10.59□□□□□ -0.71
SEMA6A-201ENST00000257414 ZNF200P98182 395 aaPredicted RBP10.59□□□□□ -0.71
SEMA6A-201ENST00000257414 RBBP5Q15291 538 aaKnown RBP10.59□□□□□ -0.71
SEMA6A-201ENST00000257414 MTFR1Q15390 333 aa10.59□□□□□ -0.71
SEMA6A-201ENST00000257414 GADL1Q6ZQY3 521 aa10.59□□□□□ -0.71
SEMA6A-201ENST00000257414 WDR75Q8IWA0 830 aaKnown RBP10.59□□□□□ -0.71
SEMA6A-201ENST00000257414 FAM71DQ8N9W8 422 aa10.59□□□□□ -0.71
SEMA6A-201ENST00000257414 RNF149Q8NC42 400 aa10.59□□□□□ -0.71
SEMA6A-201ENST00000257414 HIPK4Q8NE63 616 aa10.59□□□□□ -0.71
SEMA6A-201ENST00000257414 SPATA18Q8TC71 538 aa10.59□□□□□ -0.71
SEMA6A-201ENST00000257414 DNAJC9Q8WXX5 260 aa10.59□□□□□ -0.71
SEMA6A-201ENST00000257414 FAM149B1Q96BN6 582 aa10.59□□□□□ -0.71
SEMA6A-201ENST00000257414 TTC1Q99614 292 aa10.59□□□□□ -0.71
SEMA6A-201ENST00000257414 NIF3L1Q9GZT8 377 aa10.59□□□□□ -0.71
SEMA6A-201ENST00000257414 MANSC1Q9H8J5 431 aa10.59□□□□□ -0.71
SEMA6A-201ENST00000257414 FBXO40Q9UH90 709 aa10.59□□□□□ -0.71
SEMA6A-201ENST00000257414 PLCH1Q4KWH8 1693 aa10.59□□□□□ -0.71
SEMA6A-201ENST00000257414 SKAP2O75563 359 aaPredicted RBP10.59□□□□□ -0.71
SEMA6A-201ENST00000257414 GH1P01241 217 aa10.59□□□□□ -0.71
SEMA6A-201ENST00000257414 OTUD4Q01804 1114 aaKnown RBP10.59□□□□□ -0.71
SEMA6A-201ENST00000257414 PGM5Q15124 567 aa10.59□□□□□ -0.71
SEMA6A-201ENST00000257414 C1orf146Q5VVC0 180 aa10.59□□□□□ -0.71
SEMA6A-201ENST00000257414 MFSD5Q6N075 450 aa10.59□□□□□ -0.71
SEMA6A-201ENST00000257414 PAXIP1Q6ZW49 1069 aaPredicted RBP10.59□□□□□ -0.71
SEMA6A-201ENST00000257414 MYLK2Q9H1R3 596 aa10.59□□□□□ -0.71
SEMA6A-201ENST00000257414 HEY2Q9UBP5 337 aa10.59□□□□□ -0.71
SEMA6A-201ENST00000257414 MARCOQ9UEW3 520 aaPredicted RBP10.59□□□□□ -0.71
SEMA6A-201ENST00000257414 TRIM33Q9UPN9 1127 aa10.59□□□□□ -0.71
SEMA6A-201ENST00000257414 AKT3Q9Y243 479 aa10.59□□□□□ -0.71
SEMA6A-201ENST00000257414 ITGB4P16144 1822 aa10.59□□□□□ -0.71
SEMA6A-201ENST00000257414 ENO4A6NNW6 628 aa10.58□□□□□ -0.72
SEMA6A-201ENST00000257414 CLGNO14967 610 aa10.58□□□□□ -0.72
SEMA6A-201ENST00000257414 NVLO15381 856 aaKnown RBP10.58□□□□□ -0.72
SEMA6A-201ENST00000257414 ENO1P06733 434 aaKnown RBP10.58□□□□□ -0.72
SEMA6A-201ENST00000257414 SAT1P21673 171 aa10.58□□□□□ -0.72
SEMA6A-201ENST00000257414 ECHS1P30084 290 aa10.58□□□□□ -0.72
SEMA6A-201ENST00000257414 KDSRQ06136 332 aa10.58□□□□□ -0.72
SEMA6A-201ENST00000257414 MCL1Q07820 350 aa10.58□□□□□ -0.72
SEMA6A-201ENST00000257414 KLC1Q07866 573 aa10.58□□□□□ -0.72
SEMA6A-201ENST00000257414 SGSM1Q2NKQ1 1148 aa10.58□□□□□ -0.72
SEMA6A-201ENST00000257414 TAF1BQ53T94 588 aaPredicted RBP10.58□□□□□ -0.72
SEMA6A-201ENST00000257414 STYK1Q6J9G0 422 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms