RNA–Protein interactions for RNA: ENST00000256151.7

CCDC59-201, Transcript of coiled-coil domain containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC59, Length 1,983 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-201ENST00000256151 ZNF541Q9H0D2 1346 aa17.09■□□□□ 0.33
CCDC59-201ENST00000256151 FZD9O00144 591 aa17.09■□□□□ 0.33
CCDC59-201ENST00000256151 TM9SF1O15321 606 aa17.09■□□□□ 0.33
CCDC59-201ENST00000256151 CCDC22O60826 627 aa17.09■□□□□ 0.33
CCDC59-201ENST00000256151 DNAJC6O75061 913 aa17.09■□□□□ 0.33
CCDC59-201ENST00000256151 TJP3O95049 919 aa17.09■□□□□ 0.33
CCDC59-201ENST00000256151 NEFHP12036 1026 aa17.09■□□□□ 0.33
CCDC59-201ENST00000256151 EPHB2P29323 1055 aa17.09■□□□□ 0.33
CCDC59-201ENST00000256151 VHLP40337 213 aa17.09■□□□□ 0.33
CCDC59-201ENST00000256151 PTDSS1P48651 473 aaKnown RBP17.09■□□□□ 0.33
CCDC59-201ENST00000256151 TAS2R40P59535 323 aa17.09■□□□□ 0.33
CCDC59-201ENST00000256151 UBXN2AP68543 259 aa17.09■□□□□ 0.33
CCDC59-201ENST00000256151 CLDN10P78369 228 aa17.09■□□□□ 0.33
CCDC59-201ENST00000256151 C1QBPQ07021 282 aaKnown RBP17.09■□□□□ 0.33
CCDC59-201ENST00000256151 KLC1Q07866 573 aa17.09■□□□□ 0.33
CCDC59-201ENST00000256151 NFX1Q12986 1120 aaKnown RBP17.09■□□□□ 0.33
CCDC59-201ENST00000256151 LLGL1Q15334 1064 aa17.09■□□□□ 0.33
CCDC59-201ENST00000256151 ZRSR2Q15696 482 aaKnown RBP17.09■□□□□ 0.33
CCDC59-201ENST00000256151 CTC1Q2NKJ3 1217 aa17.09■□□□□ 0.33
CCDC59-201ENST00000256151 C4orf50Q6ZRC1 276 aa17.09■□□□□ 0.33
CCDC59-201ENST00000256151 EP400NLQ6ZTU2 488 aa17.09■□□□□ 0.33
CCDC59-201ENST00000256151 VPS11Q9H270 941 aa17.09■□□□□ 0.33
CCDC59-201ENST00000256151 SLCO1B3Q9NPD5 702 aa17.09■□□□□ 0.33
CCDC59-201ENST00000256151 KCNH7Q9NS40 1196 aa17.09■□□□□ 0.33
CCDC59-201ENST00000256151 C1orf112Q9NSG2 853 aa17.09■□□□□ 0.33
CCDC59-201ENST00000256151 ZNF70Q9UC06 446 aaPredicted RBP17.09■□□□□ 0.33
CCDC59-201ENST00000256151 IL1BP01584 269 aa17.08■□□□□ 0.33
CCDC59-201ENST00000256151 ABCD1P33897 745 aa17.08■□□□□ 0.33
CCDC59-201ENST00000256151 OCRLQ01968 901 aa17.08■□□□□ 0.33
CCDC59-201ENST00000256151 MAMLD1Q13495 774 aa17.08■□□□□ 0.33
CCDC59-201ENST00000256151 TAF1BQ53T94 588 aaPredicted RBP17.08■□□□□ 0.33
CCDC59-201ENST00000256151 RNASEH2BQ5TBB1 312 aaKnown RBP17.08■□□□□ 0.33
CCDC59-201ENST00000256151 SMYD5Q6GMV2 418 aa17.08■□□□□ 0.33
CCDC59-201ENST00000256151 SAMD3Q8N6K7 520 aa17.08■□□□□ 0.33
CCDC59-201ENST00000256151 NKD2Q969F2 451 aaPredicted RBP17.08■□□□□ 0.33
CCDC59-201ENST00000256151 ZNF333Q96JL9 665 aa17.08■□□□□ 0.33
CCDC59-201ENST00000256151 FAM167BQ9BTA0 163 aa17.08■□□□□ 0.33
CCDC59-201ENST00000256151 DHRS4Q9BTZ2 278 aa17.08■□□□□ 0.33
CCDC59-201ENST00000256151 MMADHCQ9H3L0 296 aaPredicted RBP17.08■□□□□ 0.33
CCDC59-201ENST00000256151 IP6K2Q9UHH9 426 aa17.08■□□□□ 0.33
CCDC59-201ENST00000256151 DPPA5A6NC42 116 aa17.08■□□□□ 0.32
CCDC59-201ENST00000256151 POC1B-GALNT4F8VUJ3 575 aa17.08■□□□□ 0.32
CCDC59-201ENST00000256151 TGDSO95455 350 aa17.08■□□□□ 0.32
CCDC59-201ENST00000256151 PECAM1P16284 738 aaPredicted RBP17.08■□□□□ 0.32
CCDC59-201ENST00000256151 PHBP35232 272 aa17.08■□□□□ 0.32
CCDC59-201ENST00000256151 GMPSP49915 693 aaPredicted RBP17.08■□□□□ 0.32
CCDC59-201ENST00000256151 GEMIN4P57678 1058 aaKnown RBP17.08■□□□□ 0.32
CCDC59-201ENST00000256151 KRT72Q14CN4 511 aa17.08■□□□□ 0.32
CCDC59-201ENST00000256151 FAM91A1Q658Y4 838 aa17.08■□□□□ 0.32
CCDC59-201ENST00000256151 CLNKQ7Z7G1 428 aa17.08■□□□□ 0.32
CCDC59-201ENST00000256151 PRUNE1Q86TP1 453 aa17.08■□□□□ 0.32
CCDC59-201ENST00000256151 GPD1LQ8N335 351 aa17.08■□□□□ 0.32
CCDC59-201ENST00000256151 CPA5Q8WXQ8 436 aa17.08■□□□□ 0.32
CCDC59-201ENST00000256151 SPOCK2Q92563 424 aa17.08■□□□□ 0.32
CCDC59-201ENST00000256151 FRMD8P1Q9BZ68 369 aaPredicted RBP17.08■□□□□ 0.32
CCDC59-201ENST00000256151 VCXQ9H320 206 aa17.08■□□□□ 0.32
CCDC59-201ENST00000256151 MYOZ2Q9NPC6 264 aa17.08■□□□□ 0.32
CCDC59-201ENST00000256151 ZMYND8Q9ULU4 1186 aaPredicted RBP17.08■□□□□ 0.32
CCDC59-201ENST00000256151 SMAPO00193 183 aa17.07■□□□□ 0.32
CCDC59-201ENST00000256151 WNT10BO00744 389 aa17.07■□□□□ 0.32
CCDC59-201ENST00000256151 MYCNP04198 464 aaPredicted RBP17.07■□□□□ 0.32
CCDC59-201ENST00000256151 ITGAVP06756 1048 aa17.07■□□□□ 0.32
CCDC59-201ENST00000256151 CTCFP49711 727 aaPredicted RBP17.07■□□□□ 0.32
CCDC59-201ENST00000256151 JAK3P52333 1124 aa17.07■□□□□ 0.32
CCDC59-201ENST00000256151 PSMC5P62195 406 aa17.07■□□□□ 0.32
CCDC59-201ENST00000256151 ADCY1Q08828 1119 aa17.07■□□□□ 0.32
CCDC59-201ENST00000256151 LVRNQ6Q4G3 990 aa17.07■□□□□ 0.32
CCDC59-201ENST00000256151 ADGRD1Q6QNK2 874 aa17.07■□□□□ 0.32
CCDC59-201ENST00000256151 LDHDQ86WU2 507 aa17.07■□□□□ 0.32
CCDC59-201ENST00000256151 ABRAQ8N0Z2 381 aa17.07■□□□□ 0.32
CCDC59-201ENST00000256151 FEZF2Q8TBJ5 459 aa17.07■□□□□ 0.32
CCDC59-201ENST00000256151 FAM136AQ96C01 138 aa17.07■□□□□ 0.32
CCDC59-201ENST00000256151 SLITRK1Q96PX8 696 aa17.07■□□□□ 0.32
CCDC59-201ENST00000256151 BTBD10Q9BSF8 475 aa17.07■□□□□ 0.32
CCDC59-201ENST00000256151 PCDH9Q9HC56 1237 aa17.07■□□□□ 0.32
CCDC59-201ENST00000256151 TMOD2Q9NZR1 351 aa17.07■□□□□ 0.32
CCDC59-201ENST00000256151 FEM1BQ9UK73 627 aa17.07■□□□□ 0.32
CCDC59-201ENST00000256151 CNTN6Q9UQ52 1028 aa17.07■□□□□ 0.32
CCDC59-201ENST00000256151 ASB3Q9Y575 518 aa17.07■□□□□ 0.32
CCDC59-201ENST00000256151 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.07■□□□□ 0.32
CCDC59-201ENST00000256151 ASTN2O75129 1339 aaPredicted RBP17.06■□□□□ 0.32
CCDC59-201ENST00000256151 HGSO14964 777 aaPredicted RBP17.06■□□□□ 0.32
CCDC59-201ENST00000256151 YBX3P16989 372 aaKnown RBP eCLIP17.06■□□□□ 0.32
CCDC59-201ENST00000256151 NPTX2P47972 431 aa17.06■□□□□ 0.32
CCDC59-201ENST00000256151 ARSEP51690 589 aa17.06■□□□□ 0.32
CCDC59-201ENST00000256151 NOMO3P69849 1222 aa17.06■□□□□ 0.32
CCDC59-201ENST00000256151 DMP1Q13316 513 aaPredicted RBP17.06■□□□□ 0.32
CCDC59-201ENST00000256151 KLHL38Q2WGJ6 581 aa17.06■□□□□ 0.32
CCDC59-201ENST00000256151 TKFCQ3LXA3 575 aa17.06■□□□□ 0.32
CCDC59-201ENST00000256151 SPDYE2Q495Y8 402 aa17.06■□□□□ 0.32
CCDC59-201ENST00000256151 WDR44Q5JSH3 913 aa17.06■□□□□ 0.32
CCDC59-201ENST00000256151 SAMD7Q7Z3H4 446 aa17.06■□□□□ 0.32
CCDC59-201ENST00000256151 ZNF276Q8N554 614 aa17.06■□□□□ 0.32
CCDC59-201ENST00000256151 ZFAND2BQ8WV99 257 aa17.06■□□□□ 0.32
CCDC59-201ENST00000256151 PTCD3Q96EY7 689 aaKnown RBP17.06■□□□□ 0.32
CCDC59-201ENST00000256151 VPS37BQ9H9H4 285 aa17.06■□□□□ 0.32
CCDC59-201ENST00000256151 MAP3K20Q9NYL2 800 aaKnown RBP17.06■□□□□ 0.32
CCDC59-201ENST00000256151 LRCH1Q9Y2L9 728 aa17.06■□□□□ 0.32
CCDC59-201ENST00000256151 MTO1Q9Y2Z2 717 aaKnown RBP17.06■□□□□ 0.32
CCDC59-201ENST00000256151 SIGLEC16A6NMB1 481 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms