RNA–Protein interactions for RNA: ENST00000244227.7

SNRNP27-201, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP27, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-201ENST00000244227 LHX5Q9H2C1 402 aa14.64□□□□□ -0.07
SNRNP27-201ENST00000244227 KLK14Q9P0G3 267 aa14.64□□□□□ -0.07
SNRNP27-201ENST00000244227 IPPQ9Y573 584 aa14.64□□□□□ -0.07
SNRNP27-201ENST00000244227 PCDHA3Q9Y5H8 950 aa14.64□□□□□ -0.07
SNRNP27-201ENST00000244227 TRIP11Q15643 1979 aa14.63□□□□□ -0.07
SNRNP27-201ENST00000244227 SASH3O75995 380 aa14.63□□□□□ -0.07
SNRNP27-201ENST00000244227 ITGA4P13612 1032 aa14.63□□□□□ -0.07
SNRNP27-201ENST00000244227 P4HA1P13674 534 aa14.63□□□□□ -0.07
SNRNP27-201ENST00000244227 KCNE1P15382 129 aa14.63□□□□□ -0.07
SNRNP27-201ENST00000244227 APLP1P51693 650 aa14.63□□□□□ -0.07
SNRNP27-201ENST00000244227 PTPN11Q06124 597 aaPredicted RBP14.63□□□□□ -0.07
SNRNP27-201ENST00000244227 ZNF211Q13398 564 aaPredicted RBP14.63□□□□□ -0.07
SNRNP27-201ENST00000244227 FAM47CQ5HY64 1035 aa14.63□□□□□ -0.07
SNRNP27-201ENST00000244227 AADACL2Q6P093 401 aa14.63□□□□□ -0.07
SNRNP27-201ENST00000244227 CCNI2Q6ZMN8 369 aaPredicted RBP14.63□□□□□ -0.07
SNRNP27-201ENST00000244227 BEST2Q8NFU1 509 aa14.63□□□□□ -0.07
SNRNP27-201ENST00000244227 AP1M1Q9BXS5 423 aa14.63□□□□□ -0.07
SNRNP27-201ENST00000244227 FUT8Q9BYC5 575 aa14.63□□□□□ -0.07
SNRNP27-201ENST00000244227 OSBPL7Q9BZF2 842 aa14.63□□□□□ -0.07
SNRNP27-201ENST00000244227 CYTH4Q9UIA0 394 aa14.63□□□□□ -0.07
SNRNP27-201ENST00000244227 BARX2Q9UMQ3 279 aaPredicted RBP14.63□□□□□ -0.07
SNRNP27-201ENST00000244227 L1RE1Q9UN81 338 aa14.63□□□□□ -0.07
SNRNP27-201ENST00000244227 NR2E1Q9Y466 385 aa14.63□□□□□ -0.07
SNRNP27-201ENST00000244227 THSD7BQ9C0I4 1608 aa14.62□□□□□ -0.07
SNRNP27-201ENST00000244227 PIRO00625 290 aa14.62□□□□□ -0.07
SNRNP27-201ENST00000244227 ATP8B1O43520 1251 aa14.62□□□□□ -0.07
SNRNP27-201ENST00000244227 GJB6O95452 261 aa14.62□□□□□ -0.07
SNRNP27-201ENST00000244227 FGGP02679 453 aa14.62□□□□□ -0.07
SNRNP27-201ENST00000244227 HMGCRP04035 888 aa14.62□□□□□ -0.07
SNRNP27-201ENST00000244227 MYBL2P10244 700 aa14.62□□□□□ -0.07
SNRNP27-201ENST00000244227 CD19P15391 556 aa14.62□□□□□ -0.07
SNRNP27-201ENST00000244227 TNNC1P63316 161 aa14.62□□□□□ -0.07
SNRNP27-201ENST00000244227 C9orf57Q5W0N0 161 aa14.62□□□□□ -0.07
SNRNP27-201ENST00000244227 CCDC70Q6NSX1 233 aa14.62□□□□□ -0.07
SNRNP27-201ENST00000244227 C8orf74Q6P047 294 aa14.62□□□□□ -0.07
SNRNP27-201ENST00000244227 LRRC52Q8N7C0 313 aa14.62□□□□□ -0.07
SNRNP27-201ENST00000244227 UBL4BQ8N7F7 174 aa14.62□□□□□ -0.07
SNRNP27-201ENST00000244227 FAM124BQ9H5Z6 455 aaPredicted RBP14.62□□□□□ -0.07
SNRNP27-201ENST00000244227 PARP2Q9UGN5 583 aa14.62□□□□□ -0.07
SNRNP27-201ENST00000244227 UBQLN1Q9UMX0 589 aaKnown RBP14.62□□□□□ -0.07
SNRNP27-201ENST00000244227 ST3GAL5Q9UNP4 418 aa14.62□□□□□ -0.07
SNRNP27-201ENST00000244227 HTTP42858 3142 aa14.62□□□□□ -0.07
SNRNP27-201ENST00000244227 CCDC66A2RUB6 948 aa14.62□□□□□ -0.07
SNRNP27-201ENST00000244227 MYO1FO00160 1098 aa14.62□□□□□ -0.07
SNRNP27-201ENST00000244227 MED7O43513 233 aa14.62□□□□□ -0.07
SNRNP27-201ENST00000244227 SPOPO43791 374 aa14.62□□□□□ -0.07
SNRNP27-201ENST00000244227 ERLIN1O75477 346 aa14.62□□□□□ -0.07
SNRNP27-201ENST00000244227 PROSCO94903 275 aa14.62□□□□□ -0.07
SNRNP27-201ENST00000244227 CALB1P05937 261 aa14.62□□□□□ -0.07
SNRNP27-201ENST00000244227 GLI1P08151 1106 aa14.62□□□□□ -0.07
SNRNP27-201ENST00000244227 HOXD10P28358 340 aa14.62□□□□□ -0.07
SNRNP27-201ENST00000244227 NDST1P52848 882 aa14.62□□□□□ -0.07
SNRNP27-201ENST00000244227 MYO1EQ12965 1108 aa14.62□□□□□ -0.07
SNRNP27-201ENST00000244227 RSPH3Q86UC2 560 aa14.62□□□□□ -0.07
SNRNP27-201ENST00000244227 KLHL7Q8IXQ5 586 aa14.62□□□□□ -0.07
SNRNP27-201ENST00000244227 FEZF2Q8TBJ5 459 aa14.62□□□□□ -0.07
SNRNP27-201ENST00000244227 RUBCNQ92622 972 aa14.62□□□□□ -0.07
SNRNP27-201ENST00000244227 TSPAN18Q96SJ8 248 aa14.62□□□□□ -0.07
SNRNP27-201ENST00000244227 MRPL47Q9HD33 250 aaKnown RBP14.62□□□□□ -0.07
SNRNP27-201ENST00000244227 PARVAQ9NVD7 372 aa14.62□□□□□ -0.07
SNRNP27-201ENST00000244227 STIM2Q9P246 746 aa14.62□□□□□ -0.07
SNRNP27-201ENST00000244227 DDX20Q9UHI6 824 aaKnown RBP14.62□□□□□ -0.07
SNRNP27-201ENST00000244227 NME7Q9Y5B8 376 aa14.62□□□□□ -0.07
SNRNP27-201ENST00000244227 SCINQ9Y6U3 715 aa14.62□□□□□ -0.07
SNRNP27-201ENST00000244227 CCDC188H7C350 402 aa14.61□□□□□ -0.07
SNRNP27-201ENST00000244227 M0QZ92 97 aa14.61□□□□□ -0.07
SNRNP27-201ENST00000244227 KRIT1O00522 736 aa14.61□□□□□ -0.07
SNRNP27-201ENST00000244227 RAD51CO43502 376 aa14.61□□□□□ -0.07
SNRNP27-201ENST00000244227 RPS6KA5O75582 802 aa14.61□□□□□ -0.07
SNRNP27-201ENST00000244227 MYCNP04198 464 aaPredicted RBP14.61□□□□□ -0.07
SNRNP27-201ENST00000244227 CTSHP09668 335 aa14.61□□□□□ -0.07
SNRNP27-201ENST00000244227 PYGMP11217 842 aa14.61□□□□□ -0.07
SNRNP27-201ENST00000244227 VDRP11473 427 aa14.61□□□□□ -0.07
SNRNP27-201ENST00000244227 MCM3P25205 808 aa14.61□□□□□ -0.07
SNRNP27-201ENST00000244227 SLC1A1P43005 524 aa14.61□□□□□ -0.07
SNRNP27-201ENST00000244227 RPL7AP62424 266 aaKnown RBP14.61□□□□□ -0.07
SNRNP27-201ENST00000244227 SOX4Q06945 474 aaPredicted RBP14.61□□□□□ -0.07
SNRNP27-201ENST00000244227 CNGA2Q16280 664 aa14.61□□□□□ -0.07
SNRNP27-201ENST00000244227 PTPN20Q4JDL3 420 aa14.61□□□□□ -0.07
SNRNP27-201ENST00000244227 PPP1R15BQ5SWA1 713 aa14.61□□□□□ -0.07
SNRNP27-201ENST00000244227 TWF2Q6IBS0 349 aaKnown RBP14.61□□□□□ -0.07
SNRNP27-201ENST00000244227 ZDHHC14Q8IZN3 488 aa14.61□□□□□ -0.07
SNRNP27-201ENST00000244227 PCSK9Q8NBP7 692 aaKnown RBP14.61□□□□□ -0.07
SNRNP27-201ENST00000244227 MRPL45Q9BRJ2 306 aaKnown RBP14.61□□□□□ -0.07
SNRNP27-201ENST00000244227 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.61□□□□□ -0.07
SNRNP27-201ENST00000244227 SNX9Q9Y5X1 595 aa14.61□□□□□ -0.07
SNRNP27-201ENST00000244227 SCN1AP35498 2009 aa14.6□□□□□ -0.07
SNRNP27-201ENST00000244227 TMEM191CA6NGB0 347 aa14.6□□□□□ -0.07
SNRNP27-201ENST00000244227 BHMG1C9JSJ3 638 aaPredicted RBP14.6□□□□□ -0.07
SNRNP27-201ENST00000244227 O00370 1275 aa14.6□□□□□ -0.07
SNRNP27-201ENST00000244227 MAP2K7O14733 419 aa14.6□□□□□ -0.07
SNRNP27-201ENST00000244227 TLR3O15455 904 aaKnown RBP14.6□□□□□ -0.07
SNRNP27-201ENST00000244227 SART1O43290 800 aaKnown RBP14.6□□□□□ -0.07
SNRNP27-201ENST00000244227 MICAL2O94851 1124 aa14.6□□□□□ -0.07
SNRNP27-201ENST00000244227 CYP3A5P20815 502 aa14.6□□□□□ -0.07
SNRNP27-201ENST00000244227 MAP2K2P36507 400 aa14.6□□□□□ -0.07
SNRNP27-201ENST00000244227 PTGISQ16647 500 aa14.6□□□□□ -0.07
SNRNP27-201ENST00000244227 ERICH1Q86X53 443 aa14.6□□□□□ -0.07
SNRNP27-201ENST00000244227 TTC39CQ8N584 583 aa14.6□□□□□ -0.07
SNRNP27-201ENST00000244227 PXYLP1Q8TE99 480 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms