RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.58□□□□□ -1.04
CXCR4-201ENST00000241393 CRYGNQ8WXF5 182 aa8.58□□□□□ -1.04
CXCR4-201ENST00000241393 EXOC4Q96A65 974 aa8.58□□□□□ -1.04
CXCR4-201ENST00000241393 MASTLQ96GX5 879 aa8.58□□□□□ -1.04
CXCR4-201ENST00000241393 C1orf159Q96HA4 380 aa8.58□□□□□ -1.04
CXCR4-201ENST00000241393 ALS2CR12Q96Q35 445 aa8.58□□□□□ -1.04
CXCR4-201ENST00000241393 MCMBPQ9BTE3 642 aa8.58□□□□□ -1.04
CXCR4-201ENST00000241393 IFIH1Q9BYX4 1025 aaKnown RBP8.58□□□□□ -1.04
CXCR4-201ENST00000241393 SH2D4AQ9H788 454 aa8.58□□□□□ -1.04
CXCR4-201ENST00000241393 MED4Q9NPJ6 270 aa8.58□□□□□ -1.04
CXCR4-201ENST00000241393 LUC7LQ9NQ29 371 aaKnown RBP8.58□□□□□ -1.04
CXCR4-201ENST00000241393 PANK4Q9NVE7 773 aa8.58□□□□□ -1.04
CXCR4-201ENST00000241393 CEP72Q9P209 647 aa8.58□□□□□ -1.04
CXCR4-201ENST00000241393 ARHGAP20Q9P2F6 1191 aa8.58□□□□□ -1.04
CXCR4-201ENST00000241393 ZHX1Q9UKY1 873 aaPredicted RBP8.58□□□□□ -1.04
CXCR4-201ENST00000241393 PCDHA13Q9Y5I0 950 aa8.58□□□□□ -1.04
CXCR4-201ENST00000241393 MYH4Q9Y623 1939 aa8.58□□□□□ -1.04
CXCR4-201ENST00000241393 KIAA1324LA8MWY0 1029 aaPredicted RBP8.57□□□□□ -1.04
CXCR4-201ENST00000241393 PLA2G4BP0C869 781 aa8.57□□□□□ -1.04
CXCR4-201ENST00000241393 TCP1P17987 556 aaKnown RBP8.57□□□□□ -1.04
CXCR4-201ENST00000241393 KIF11P52732 1056 aa8.57□□□□□ -1.04
CXCR4-201ENST00000241393 QRICH1Q2TAL8 776 aa8.57□□□□□ -1.04
CXCR4-201ENST00000241393 ASTE1Q2TB18 679 aaPredicted RBP8.57□□□□□ -1.04
CXCR4-201ENST00000241393 Q4G0T1 1027 aa8.57□□□□□ -1.04
CXCR4-201ENST00000241393 STRIP1Q5VSL9 837 aa8.57□□□□□ -1.04
CXCR4-201ENST00000241393 SLFN13Q68D06 897 aa8.57□□□□□ -1.04
CXCR4-201ENST00000241393 NCAPH2Q6IBW4 605 aa8.57□□□□□ -1.04
CXCR4-201ENST00000241393 CCDC70Q6NSX1 233 aa8.57□□□□□ -1.04
CXCR4-201ENST00000241393 TATDN1Q6P1N9 297 aa8.57□□□□□ -1.04
CXCR4-201ENST00000241393 TMEM179Q6ZVK1 233 aa8.57□□□□□ -1.04
CXCR4-201ENST00000241393 C2CD5Q86YS7 1000 aa8.57□□□□□ -1.04
CXCR4-201ENST00000241393 NOA1Q8NC60 698 aaKnown RBP8.57□□□□□ -1.04
CXCR4-201ENST00000241393 KREMEN2Q8NCW0 462 aa8.57□□□□□ -1.04
CXCR4-201ENST00000241393 HPS3Q969F9 1004 aa8.57□□□□□ -1.04
CXCR4-201ENST00000241393 ANO3Q9BYT9 981 aa8.57□□□□□ -1.04
CXCR4-201ENST00000241393 MMRN2Q9H8L6 949 aa8.57□□□□□ -1.04
CXCR4-201ENST00000241393 GPRC5CQ9NQ84 441 aa8.57□□□□□ -1.04
CXCR4-201ENST00000241393 SLAMF8Q9P0V8 285 aa8.57□□□□□ -1.04
CXCR4-201ENST00000241393 SNX12Q9UMY4 172 aa8.57□□□□□ -1.04
CXCR4-201ENST00000241393 PCDHA2Q9Y5H9 948 aa8.57□□□□□ -1.04
CXCR4-201ENST00000241393 MYH7BA7E2Y1 1941 aa8.57□□□□□ -1.04
CXCR4-201ENST00000241393 A0A1W2PQ45 241 aaPredicted RBP8.56□□□□□ -1.04
CXCR4-201ENST00000241393 A0A1W2PQY0 241 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 TMEM82A0PJX8 343 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 F8W031 263 aaPredicted RBP8.56□□□□□ -1.04
CXCR4-201ENST00000241393 MPHOSPH10O00566 681 aaKnown RBP8.56□□□□□ -1.04
CXCR4-201ENST00000241393 ZNF263O14978 683 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 AKR1B10O60218 316 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 RHOXF2BP0C7M4 288 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 CYP11B2P19099 503 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 SSTR4P31391 388 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 CIITAP33076 1130 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 SLC1A4P43007 532 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 CD97P48960 835 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 AARSP49588 968 aaKnown RBP eCLIP8.56□□□□□ -1.04
CXCR4-201ENST00000241393 BNIP3Q12983 259 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 LAPTM5Q13571 262 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 CASP8Q14790 479 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 SLC14A2Q15849 920 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 CDC37Q16543 378 aaPredicted RBP8.56□□□□□ -1.04
CXCR4-201ENST00000241393 PRSS53Q2L4Q9 553 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 CERKLQ49MI3 558 aaPredicted RBP8.56□□□□□ -1.04
CXCR4-201ENST00000241393 SLC9C1Q4G0N8 1177 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 DALRD3Q5D0E6 543 aaKnown RBP8.56□□□□□ -1.04
CXCR4-201ENST00000241393 SLC23A3Q6PIS1 610 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 MTDHQ86UE4 582 aaKnown RBP8.56□□□□□ -1.04
CXCR4-201ENST00000241393 AHI1Q8N157 1196 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 MMGT1Q8N4V1 131 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 FAM71BQ8TC56 605 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 MAP6Q96JE9 813 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 FAM20AQ96MK3 541 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 RHOXF2Q9BQY4 288 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 MXD3Q9BW11 206 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 AMNQ9BXJ7 453 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 BRINP2Q9C0B6 783 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 DEF6Q9H4E7 631 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 DNAJC18Q9H819 358 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 FAM207AQ9NSI2 230 aaPredicted RBP8.56□□□□□ -1.04
CXCR4-201ENST00000241393 CALCOCO1Q9P1Z2 691 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 RNF14Q9UBS8 474 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 PCDHA1Q9Y5I3 950 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 NPFFR2Q9Y5X5 522 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 ATP8B3O60423 1300 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 ATRNL1Q5VV63 1379 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 LRRC53A6NM62 1247 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 TRAF5O00463 557 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 MEIS2O14770 477 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 POLR3GO15318 223 aaPredicted RBP8.56□□□□□ -1.04
CXCR4-201ENST00000241393 ASLP04424 464 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 SERPING1P05155 500 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 EEF2P13639 858 aaKnown RBP8.56□□□□□ -1.04
CXCR4-201ENST00000241393 ANXA13P27216 316 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 RPA1P27694 616 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 SLC16A2P36021 539 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 SREBF1P36956 1147 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 MAGEA1P43355 309 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 SLC12A3P55017 1021 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 RPL11P62913 178 aaKnown RBP8.56□□□□□ -1.04
CXCR4-201ENST00000241393 KIZQ2M2Z5 673 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 CCDC40Q4G0X9 1142 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms