RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 CILPO75339 1184 aa24.68■■□□□ 1.54
MSX2-201ENST00000239243 SYF2O95926 243 aaKnown RBP24.68■■□□□ 1.54
MSX2-201ENST00000239243 FAM153BP0C7A2 387 aa24.68■■□□□ 1.54
MSX2-201ENST00000239243 GNAT1P11488 350 aa24.68■■□□□ 1.54
MSX2-201ENST00000239243 HOXA11P31270 313 aaPredicted RBP24.68■■□□□ 1.54
MSX2-201ENST00000239243 TRADDQ15628 312 aa24.68■■□□□ 1.54
MSX2-201ENST00000239243 FAM153CQ494X1 144 aa24.68■■□□□ 1.54
MSX2-201ENST00000239243 GOLGA6L1Q8N7Z2 621 aa24.68■■□□□ 1.54
MSX2-201ENST00000239243 C12orf50Q8NA57 414 aaPredicted RBP24.68■■□□□ 1.54
MSX2-201ENST00000239243 LRRC45Q96CN5 670 aa24.68■■□□□ 1.54
MSX2-201ENST00000239243 OSMRQ99650 979 aa24.68■■□□□ 1.54
MSX2-201ENST00000239243 ERP44Q9BS26 406 aa24.68■■□□□ 1.54
MSX2-201ENST00000239243 VPS18Q9P253 973 aa24.68■■□□□ 1.54
MSX2-201ENST00000239243 FAM153AQ9UHL3 310 aa24.68■■□□□ 1.54
MSX2-201ENST00000239243 FSCN2O14926 492 aa24.67■■□□□ 1.54
MSX2-201ENST00000239243 IGHA2P01877 340 aa24.67■■□□□ 1.54
MSX2-201ENST00000239243 ECHS1P30084 290 aa24.67■■□□□ 1.54
MSX2-201ENST00000239243 GBP1P32455 592 aa24.67■■□□□ 1.54
MSX2-201ENST00000239243 FNTAP49354 379 aa24.67■■□□□ 1.54
MSX2-201ENST00000239243 GUCY2FP51841 1108 aa24.67■■□□□ 1.54
MSX2-201ENST00000239243 MYO1EQ12965 1108 aa24.67■■□□□ 1.54
MSX2-201ENST00000239243 LENG1Q96BZ8 264 aaPredicted RBP24.67■■□□□ 1.54
MSX2-201ENST00000239243 SMYD3Q9H7B4 428 aa24.67■■□□□ 1.54
MSX2-201ENST00000239243 TMEM191CA6NGB0 347 aa24.67■■□□□ 1.54
MSX2-201ENST00000239243 DAPK3O43293 454 aa24.67■■□□□ 1.54
MSX2-201ENST00000239243 AKR1A1P14550 325 aa24.67■■□□□ 1.54
MSX2-201ENST00000239243 HSPA9P38646 679 aaKnown RBP24.67■■□□□ 1.54
MSX2-201ENST00000239243 PTPN11Q06124 597 aaPredicted RBP24.67■■□□□ 1.54
MSX2-201ENST00000239243 CCDC137Q6PK04 289 aaKnown RBP24.67■■□□□ 1.54
MSX2-201ENST00000239243 JAMLQ86YT9 394 aa24.67■■□□□ 1.54
MSX2-201ENST00000239243 TSEN2Q8NCE0 465 aaKnown RBP24.67■■□□□ 1.54
MSX2-201ENST00000239243 C3orf20Q8ND61 904 aa24.67■■□□□ 1.54
MSX2-201ENST00000239243 DDX27Q96GQ7 796 aaKnown RBP24.67■■□□□ 1.54
MSX2-201ENST00000239243 TMEM176AQ96HP8 235 aa24.67■■□□□ 1.54
MSX2-201ENST00000239243 SDCBP2Q9H190 292 aa24.67■■□□□ 1.54
MSX2-201ENST00000239243 PRDM10Q9NQV6 1147 aa24.67■■□□□ 1.54
MSX2-201ENST00000239243 FAN1Q9Y2M0 1017 aa24.67■■□□□ 1.54
MSX2-201ENST00000239243 AGPSO00116 658 aa24.66■■□□□ 1.54
MSX2-201ENST00000239243 DRG2P55039 364 aaKnown RBP24.66■■□□□ 1.54
MSX2-201ENST00000239243 CDH8P55286 799 aa24.66■■□□□ 1.54
MSX2-201ENST00000239243 CFAP58Q5T655 872 aa24.66■■□□□ 1.54
MSX2-201ENST00000239243 RUFY4Q6ZNE9 571 aa24.66■■□□□ 1.54
MSX2-201ENST00000239243 WDTC1Q8N5D0 677 aa24.66■■□□□ 1.54
MSX2-201ENST00000239243 TCRBV5S1A1TA0A578 114 aa24.66■■□□□ 1.54
MSX2-201ENST00000239243 RNF40O75150 1001 aa24.66■■□□□ 1.54
MSX2-201ENST00000239243 INCA1Q0VD86 236 aa24.66■■□□□ 1.54
MSX2-201ENST00000239243 FSCN1Q16658 493 aaKnown RBP24.66■■□□□ 1.54
MSX2-201ENST00000239243 DUPD1Q68J44 220 aa24.66■■□□□ 1.54
MSX2-201ENST00000239243 DCUN1D2Q6PH85 259 aa24.66■■□□□ 1.54
MSX2-201ENST00000239243 KATNAL2Q8IYT4 538 aa24.66■■□□□ 1.54
MSX2-201ENST00000239243 NME8Q8N427 588 aa24.66■■□□□ 1.54
MSX2-201ENST00000239243 SLC4A11Q8NBS3 891 aa24.66■■□□□ 1.54
MSX2-201ENST00000239243 DNAJB3Q8WWF6 145 aa24.66■■□□□ 1.54
MSX2-201ENST00000239243 C18orf8Q96DM3 657 aa24.66■■□□□ 1.54
MSX2-201ENST00000239243 SNX27Q96L92 541 aa24.66■■□□□ 1.54
MSX2-201ENST00000239243 TRIM6Q9C030 488 aaPredicted RBP24.66■■□□□ 1.54
MSX2-201ENST00000239243 C17orf102A2RUQ5 167 aa24.65■■□□□ 1.54
MSX2-201ENST00000239243 KPNA6O60684 536 aa24.65■■□□□ 1.54
MSX2-201ENST00000239243 CRHR2Q13324 411 aa24.65■■□□□ 1.54
MSX2-201ENST00000239243 DDX42Q86XP3 938 aaKnown RBP eCLIP24.65■■□□□ 1.54
MSX2-201ENST00000239243 TRIM51Q9BSJ1 452 aa24.65■■□□□ 1.54
MSX2-201ENST00000239243 LRRC19Q9H756 370 aa24.65■■□□□ 1.54
MSX2-201ENST00000239243 WDR35Q9P2L0 1181 aa24.65■■□□□ 1.54
MSX2-201ENST00000239243 BARX2Q9UMQ3 279 aaPredicted RBP24.65■■□□□ 1.54
MSX2-201ENST00000239243 RARAP10276 462 aa24.65■■□□□ 1.54
MSX2-201ENST00000239243 VDRP11473 427 aa24.65■■□□□ 1.54
MSX2-201ENST00000239243 COILP38432 576 aaPredicted RBP24.65■■□□□ 1.54
MSX2-201ENST00000239243 CETN2P41208 172 aa24.65■■□□□ 1.54
MSX2-201ENST00000239243 SIX1Q15475 284 aaPredicted RBP24.65■■□□□ 1.54
MSX2-201ENST00000239243 CDHR5Q9HBB8 845 aa24.65■■□□□ 1.54
MSX2-201ENST00000239243 SNTG2Q9NY99 539 aa24.65■■□□□ 1.54
MSX2-201ENST00000239243 KIAA1257Q9ULG3 409 aa24.65■■□□□ 1.54
MSX2-201ENST00000239243 TLL2Q9Y6L7 1015 aa24.65■■□□□ 1.54
MSX2-201ENST00000239243 PTGIRP43119 386 aa24.64■■□□□ 1.54
MSX2-201ENST00000239243 BEX3Q00994 111 aa24.64■■□□□ 1.54
MSX2-201ENST00000239243 PIGHQ14442 188 aaPredicted RBP24.64■■□□□ 1.54
MSX2-201ENST00000239243 DENND1BQ6P3S1 775 aa24.64■■□□□ 1.54
MSX2-201ENST00000239243 ZDHHC14Q8IZN3 488 aa24.64■■□□□ 1.54
MSX2-201ENST00000239243 BEST2Q8NFU1 509 aa24.64■■□□□ 1.54
MSX2-201ENST00000239243 EXD1Q8NHP7 514 aa24.64■■□□□ 1.54
MSX2-201ENST00000239243 MCEEQ96PE7 176 aa24.64■■□□□ 1.54
MSX2-201ENST00000239243 DPH5Q9H2P9 285 aa24.64■■□□□ 1.54
MSX2-201ENST00000239243 PASKQ96RG2 1323 aa24.64■■□□□ 1.53
MSX2-201ENST00000239243 GOLGA8KD6RF30 607 aa24.63■■□□□ 1.53
MSX2-201ENST00000239243 TREHO43280 583 aa24.63■■□□□ 1.53
MSX2-201ENST00000239243 GSCP56915 257 aaPredicted RBP24.63■■□□□ 1.53
MSX2-201ENST00000239243 RPL7AP62424 266 aaKnown RBP24.63■■□□□ 1.53
MSX2-201ENST00000239243 SNX17Q15036 470 aa24.63■■□□□ 1.53
MSX2-201ENST00000239243 PPP1R15BQ5SWA1 713 aa24.63■■□□□ 1.53
MSX2-201ENST00000239243 LRRC38Q5VT99 294 aa24.63■■□□□ 1.53
MSX2-201ENST00000239243 CCDC105Q8IYK2 499 aa24.63■■□□□ 1.53
MSX2-201ENST00000239243 C7orf31Q8N865 590 aa24.63■■□□□ 1.53
MSX2-201ENST00000239243 EXOC4Q96A65 974 aa24.63■■□□□ 1.53
MSX2-201ENST00000239243 TSPAN18Q96SJ8 248 aa24.63■■□□□ 1.53
MSX2-201ENST00000239243 SH3GL2Q99962 352 aa24.63■■□□□ 1.53
MSX2-201ENST00000239243 ELOVL4Q9GZR5 314 aa24.63■■□□□ 1.53
MSX2-201ENST00000239243 HOMER3Q9NSC5 361 aa24.63■■□□□ 1.53
MSX2-201ENST00000239243 PARP2Q9UGN5 583 aa24.63■■□□□ 1.53
MSX2-201ENST00000239243 ADAM21Q9UKJ8 722 aa24.63■■□□□ 1.53
MSX2-201ENST00000239243 FAM155AB1AL88 458 aaPredicted RBP24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms