RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 GSTTP1A0A1W2PQM5 241 aa9.93□□□□□ -0.82
HLA-DOA-201ENST00000229829 TESPA1A2RU30 521 aaPredicted RBP9.93□□□□□ -0.82
HLA-DOA-201ENST00000229829 MAPK13O15264 365 aa9.93□□□□□ -0.82
HLA-DOA-201ENST00000229829 PMM2O15305 246 aa9.93□□□□□ -0.82
HLA-DOA-201ENST00000229829 ATF2P15336 505 aa9.93□□□□□ -0.82
HLA-DOA-201ENST00000229829 CD58P19256 250 aa9.93□□□□□ -0.82
HLA-DOA-201ENST00000229829 GSTT1P30711 240 aa9.93□□□□□ -0.82
HLA-DOA-201ENST00000229829 CCNFP41002 786 aa9.93□□□□□ -0.82
HLA-DOA-201ENST00000229829 MAGEA10P43363 369 aaPredicted RBP9.93□□□□□ -0.82
HLA-DOA-201ENST00000229829 CYP24A1Q07973 514 aa9.93□□□□□ -0.82
HLA-DOA-201ENST00000229829 PTK6Q13882 451 aa9.93□□□□□ -0.82
HLA-DOA-201ENST00000229829 FAM160B2Q86V87 743 aa9.93□□□□□ -0.82
HLA-DOA-201ENST00000229829 SCYL3Q8IZE3 742 aa9.93□□□□□ -0.82
HLA-DOA-201ENST00000229829 PPFIBP2Q8ND30 876 aa9.93□□□□□ -0.82
HLA-DOA-201ENST00000229829 TGS1Q96RS0 853 aaKnown RBP9.93□□□□□ -0.82
HLA-DOA-201ENST00000229829 ZNF341Q9BYN7 854 aa9.93□□□□□ -0.82
HLA-DOA-201ENST00000229829 KMT5AQ9NQR1 393 aa9.93□□□□□ -0.82
HLA-DOA-201ENST00000229829 DNAAF2Q9NVR5 837 aaKnown RBP9.93□□□□□ -0.82
HLA-DOA-201ENST00000229829 SYNPO2Q9UMS6 1093 aa9.93□□□□□ -0.82
HLA-DOA-201ENST00000229829 HNRNPRO43390 633 aaKnown RBP9.93□□□□□ -0.82
HLA-DOA-201ENST00000229829 CBX6O95503 412 aa9.93□□□□□ -0.82
HLA-DOA-201ENST00000229829 TCF4P15884 667 aa9.93□□□□□ -0.82
HLA-DOA-201ENST00000229829 SP4Q02446 784 aa9.93□□□□□ -0.82
HLA-DOA-201ENST00000229829 LRRC36Q1X8D7 754 aa9.93□□□□□ -0.82
HLA-DOA-201ENST00000229829 CYP4F22Q6NT55 531 aa9.93□□□□□ -0.82
HLA-DOA-201ENST00000229829 TRIM42Q8IWZ5 723 aa9.93□□□□□ -0.82
HLA-DOA-201ENST00000229829 C4orf19Q8IY42 314 aa9.93□□□□□ -0.82
HLA-DOA-201ENST00000229829 TEX9Q8N6V9 391 aa9.93□□□□□ -0.82
HLA-DOA-201ENST00000229829 CKAP2Q8WWK9 683 aa9.93□□□□□ -0.82
HLA-DOA-201ENST00000229829 MFSD14AQ96MC6 490 aa9.93□□□□□ -0.82
HLA-DOA-201ENST00000229829 WDR35Q9P2L0 1181 aa9.93□□□□□ -0.82
HLA-DOA-201ENST00000229829 ZNF711Q9Y462 761 aa9.93□□□□□ -0.82
HLA-DOA-201ENST00000229829 LRRC37A2A6NM11 1700 aa9.93□□□□□ -0.82
HLA-DOA-201ENST00000229829 ZNF189O75820 626 aaPredicted RBP9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 FDX1P10109 184 aa9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 FOXN2P32314 431 aa9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 DSG3P32926 999 aa9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 ABCD1P33897 745 aa9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 GALNTL6Q49A17 601 aa9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 PCNX4Q63HM2 1172 aa9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 ANKLE1Q8NAG6 615 aa9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 SPOCK2Q92563 424 aa9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 STMN2Q93045 179 aa9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 OPTNQ96CV9 577 aa9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 C11orf70Q9BRQ4 267 aa9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 RNPEPL1Q9HAU8 725 aa9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 NEU2Q9Y3R4 380 aa9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 SLC4A7Q9Y6M7 1214 aa9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 PI4K2BG5E9Z4 385 aa9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 TXNDC9O14530 226 aa9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 HNRNPDLO14979 420 aaKnown RBP9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 ZNF862O60290 1169 aa9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 SPAG7O75391 227 aa9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 LYPLA2O95372 231 aa9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 ZSCAN5DPP0CG00 497 aa9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 ATXN8OSP0DMR3 200 aa9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 KRT10P13645 584 aa9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 CALB2P22676 271 aa9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 PSMC5P62195 406 aa9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 DMP1Q13316 513 aaPredicted RBP9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 KLF1Q13351 362 aaPredicted RBP9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 PGM5Q15124 567 aa9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 DLGAP5Q15398 846 aa9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 P3H1Q32P28 736 aa9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 PHC3Q8NDX5 983 aa9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 ATL2Q8NHH9 583 aa9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 TRAIPQ9BWF2 469 aa9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 ZNF232Q9UNY5 417 aa9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 ARL2BPQ9Y2Y0 163 aa9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 UMODL1Q5DID0 1318 aa9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 GAS8O95995 478 aa9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 SKIP12755 728 aa9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 ETS1P14921 441 aa9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 PTPRJQ12913 1337 aa9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 BNIP1Q12981 228 aa9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 DOCK1Q14185 1865 aa9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 RCN1Q15293 331 aa9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 ZRSR2Q15696 482 aaKnown RBP9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 TAS1R3Q7RTX0 852 aa9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 FBXL18Q96ME1 805 aa9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 PLVAPQ9BX97 442 aa9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 PITPNM3Q9BZ71 974 aa9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 FHDC1Q9C0D6 1143 aaPredicted RBP9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 DEFB129Q9H1M3 183 aa9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 NKIRAS1Q9NYS0 192 aa9.92□□□□□ -0.82
HLA-DOA-201ENST00000229829 SUPT3HO75486 399 aa9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 FAM200BP0CF97 657 aa9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 DESP17661 470 aa9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 ACOT2P49753 483 aa9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 WDR4P57081 412 aaKnown RBP9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 DYNC1I2Q13409 638 aaKnown RBP9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 IZUMO3Q5VZ72 239 aa9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 KAZNQ674X7 775 aa9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 MTHFD1LQ6UB35 978 aa9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 MCUR1Q96AQ8 359 aa9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 NMD3Q96D46 503 aaKnown RBP9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 CEP170P1Q96L14 293 aa9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 IWS1Q96ST2 819 aa9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 RMDN3Q96TC7 470 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms