RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 APRTP07741 180 aa14.31□□□□□ -0.12
RAB3D-201ENST00000222120 CXCL8P10145 99 aa14.31□□□□□ -0.12
RAB3D-201ENST00000222120 GCNT1Q02742 428 aa14.31□□□□□ -0.12
RAB3D-201ENST00000222120 FKBP1CQ5VVH2 108 aa14.31□□□□□ -0.12
RAB3D-201ENST00000222120 FAM129AQ9BZQ8 928 aa14.31□□□□□ -0.12
RAB3D-201ENST00000222120 DCLK3Q9C098 648 aa14.31□□□□□ -0.12
RAB3D-201ENST00000222120 C2orf40Q9H1Z8 148 aa14.31□□□□□ -0.12
RAB3D-201ENST00000222120 DHX35Q9H5Z1 703 aaKnown RBP14.31□□□□□ -0.12
RAB3D-201ENST00000222120 ASNSD1Q9NWL6 643 aa14.31□□□□□ -0.12
RAB3D-201ENST00000222120 GLI3P10071 1580 aa14.31□□□□□ -0.12
RAB3D-201ENST00000222120 CCDC88AQ3V6T2 1871 aa14.31□□□□□ -0.12
RAB3D-201ENST00000222120 TRAPPC3O43617 180 aa14.31□□□□□ -0.12
RAB3D-201ENST00000222120 TOM1L1O75674 476 aa14.31□□□□□ -0.12
RAB3D-201ENST00000222120 GLRA2P23416 452 aa14.31□□□□□ -0.12
RAB3D-201ENST00000222120 RASSF2P50749 326 aa14.31□□□□□ -0.12
RAB3D-201ENST00000222120 ZNF677Q86XU0 584 aa14.31□□□□□ -0.12
RAB3D-201ENST00000222120 PLEKHO2Q8TD55 490 aa14.31□□□□□ -0.12
RAB3D-201ENST00000222120 LRRC37BQ96QE4 947 aa14.31□□□□□ -0.12
RAB3D-201ENST00000222120 RAB6BQ9NRW1 208 aa14.31□□□□□ -0.12
RAB3D-201ENST00000222120 NUB1Q9Y5A7 615 aa14.31□□□□□ -0.12
RAB3D-201ENST00000222120 CLGNO14967 610 aa14.31□□□□□ -0.12
RAB3D-201ENST00000222120 OGTO15294 1046 aa14.31□□□□□ -0.12
RAB3D-201ENST00000222120 MXD4Q14582 209 aaPredicted RBP14.31□□□□□ -0.12
RAB3D-201ENST00000222120 GLRA4Q5JXX5 417 aa14.31□□□□□ -0.12
RAB3D-201ENST00000222120 DCAF12L1Q5VU92 463 aa14.31□□□□□ -0.12
RAB3D-201ENST00000222120 RASGEF1CQ8N431 466 aa14.31□□□□□ -0.12
RAB3D-201ENST00000222120 ZBTB10Q96DT7 871 aa14.31□□□□□ -0.12
RAB3D-201ENST00000222120 SNX25Q9H3E2 840 aa14.31□□□□□ -0.12
RAB3D-201ENST00000222120 R3HDM2Q9Y2K5 976 aaKnown RBP14.31□□□□□ -0.12
RAB3D-201ENST00000222120 RPS6KA5O75582 802 aa14.3□□□□□ -0.12
RAB3D-201ENST00000222120 SDC4P31431 198 aa14.3□□□□□ -0.12
RAB3D-201ENST00000222120 SLC24A3Q9HC58 644 aa14.3□□□□□ -0.12
RAB3D-201ENST00000222120 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.3□□□□□ -0.12
RAB3D-201ENST00000222120 POLIQ9UNA4 740 aa14.3□□□□□ -0.12
RAB3D-201ENST00000222120 NAALADL1Q9UQQ1 740 aa14.3□□□□□ -0.12
RAB3D-201ENST00000222120 GCLCP48506 637 aaPredicted RBP14.3□□□□□ -0.12
RAB3D-201ENST00000222120 RFX8Q6ZV50 586 aa14.3□□□□□ -0.12
RAB3D-201ENST00000222120 CD302Q8IX05 232 aa14.3□□□□□ -0.12
RAB3D-201ENST00000222120 CEP120Q8N960 986 aa14.3□□□□□ -0.12
RAB3D-201ENST00000222120 ACTL9Q8TC94 416 aa14.3□□□□□ -0.12
RAB3D-201ENST00000222120 CGRRF1Q99675 332 aa14.3□□□□□ -0.12
RAB3D-201ENST00000222120 GPATCH2LQ9NWQ4 482 aa14.3□□□□□ -0.12
RAB3D-201ENST00000222120 FAM47DPA6NHR8 397 aa14.3□□□□□ -0.12
RAB3D-201ENST00000222120 MAPK13O15264 365 aa14.3□□□□□ -0.12
RAB3D-201ENST00000222120 KCNN4O15554 427 aa14.3□□□□□ -0.12
RAB3D-201ENST00000222120 PPFIA2O75334 1257 aa14.3□□□□□ -0.12
RAB3D-201ENST00000222120 SCTRP47872 440 aa14.3□□□□□ -0.12
RAB3D-201ENST00000222120 TAS2R40P59535 323 aa14.3□□□□□ -0.12
RAB3D-201ENST00000222120 SARNPP82979 210 aaKnown RBP14.3□□□□□ -0.12
RAB3D-201ENST00000222120 PIGHQ14442 188 aaPredicted RBP14.3□□□□□ -0.12
RAB3D-201ENST00000222120 TTC13Q8NBP0 860 aa14.3□□□□□ -0.12
RAB3D-201ENST00000222120 HELQQ8TDG4 1101 aa14.3□□□□□ -0.12
RAB3D-201ENST00000222120 COPS5Q92905 334 aa14.3□□□□□ -0.12
RAB3D-201ENST00000222120 CPB2Q96IY4 423 aa14.3□□□□□ -0.12
RAB3D-201ENST00000222120 UMODL1Q5DID0 1318 aa14.3□□□□□ -0.12
RAB3D-201ENST00000222120 VTNP04004 478 aa14.29□□□□□ -0.12
RAB3D-201ENST00000222120 OTUD4Q01804 1114 aaKnown RBP14.29□□□□□ -0.12
RAB3D-201ENST00000222120 OVGP1Q12889 678 aa14.29□□□□□ -0.12
RAB3D-201ENST00000222120 IER5Q5VY09 327 aa14.29□□□□□ -0.12
RAB3D-201ENST00000222120 ATP11CQ8NB49 1132 aa14.29□□□□□ -0.12
RAB3D-201ENST00000222120 TTC25Q96NG3 672 aa14.29□□□□□ -0.12
RAB3D-201ENST00000222120 ROPN1BQ9BZX4 212 aaPredicted RBP14.29□□□□□ -0.12
RAB3D-201ENST00000222120 ROPN1Q9HAT0 212 aaPredicted RBP14.29□□□□□ -0.12
RAB3D-201ENST00000222120 NPHS2Q9NP85 383 aa14.29□□□□□ -0.12
RAB3D-201ENST00000222120 MAP3K20Q9NYL2 800 aaKnown RBP14.29□□□□□ -0.12
RAB3D-201ENST00000222120 ARHGAP42A6NI28 874 aa14.29□□□□□ -0.12
RAB3D-201ENST00000222120 LCP1P13796 627 aa14.29□□□□□ -0.12
RAB3D-201ENST00000222120 CHRNB2P17787 502 aa14.29□□□□□ -0.12
RAB3D-201ENST00000222120 RPS12P25398 132 aaKnown RBP14.29□□□□□ -0.12
RAB3D-201ENST00000222120 NCKAP1LP55160 1127 aa14.29□□□□□ -0.12
RAB3D-201ENST00000222120 ROR1Q01973 937 aa14.29□□□□□ -0.12
RAB3D-201ENST00000222120 LAMTOR4Q0VGL1 99 aa14.29□□□□□ -0.12
RAB3D-201ENST00000222120 SLFN11Q7Z7L1 901 aa14.29□□□□□ -0.12
RAB3D-201ENST00000222120 ERP27Q96DN0 273 aa14.29□□□□□ -0.12
RAB3D-201ENST00000222120 RAB3IPQ96QF0 476 aaPredicted RBP14.29□□□□□ -0.12
RAB3D-201ENST00000222120 XPO7Q9UIA9 1087 aaKnown RBP14.29□□□□□ -0.12
RAB3D-201ENST00000222120 SYNPO2Q9UMS6 1093 aa14.29□□□□□ -0.12
RAB3D-201ENST00000222120 A8MXQ7 604 aa14.29□□□□□ -0.12
RAB3D-201ENST00000222120 DHX15O43143 795 aaKnown RBP14.29□□□□□ -0.12
RAB3D-201ENST00000222120 TBC1D12O60347 775 aa14.29□□□□□ -0.12
RAB3D-201ENST00000222120 CTCFP49711 727 aaPredicted RBP14.29□□□□□ -0.12
RAB3D-201ENST00000222120 CCNA1P78396 465 aa14.29□□□□□ -0.12
RAB3D-201ENST00000222120 TFDP2Q14188 446 aa14.29□□□□□ -0.12
RAB3D-201ENST00000222120 DNAAF3Q8N9W5 541 aa14.29□□□□□ -0.12
RAB3D-201ENST00000222120 DDX56Q9NY93 547 aaKnown RBP14.29□□□□□ -0.12
RAB3D-201ENST00000222120 WHRNQ9P202 907 aa14.29□□□□□ -0.12
RAB3D-201ENST00000222120 G3BP2Q9UN86 482 aaKnown RBP14.29□□□□□ -0.12
RAB3D-201ENST00000222120 ARL2BPQ9Y2Y0 163 aa14.29□□□□□ -0.12
RAB3D-201ENST00000222120 CFAP69A5D8W1 941 aa14.29□□□□□ -0.12
RAB3D-201ENST00000222120 NDC80O14777 642 aa14.29□□□□□ -0.12
RAB3D-201ENST00000222120 BAG2O95816 211 aa14.29□□□□□ -0.12
RAB3D-201ENST00000222120 RFC5P40937 340 aa14.29□□□□□ -0.12
RAB3D-201ENST00000222120 TMPRSS15P98073 1019 aa14.29□□□□□ -0.12
RAB3D-201ENST00000222120 PSMD6Q15008 389 aa14.29□□□□□ -0.12
RAB3D-201ENST00000222120 GJC2Q5T442 439 aaPredicted RBP14.29□□□□□ -0.12
RAB3D-201ENST00000222120 SYDE1Q6ZW31 735 aaPredicted RBP14.29□□□□□ -0.12
RAB3D-201ENST00000222120 CHST13Q8NET6 341 aa14.29□□□□□ -0.12
RAB3D-201ENST00000222120 SERPINB12Q96P63 405 aa14.29□□□□□ -0.12
RAB3D-201ENST00000222120 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.29□□□□□ -0.12
RAB3D-201ENST00000222120 ZC3H11AO75152 810 aaKnown RBP eCLIP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms